Miyakogusa Predicted Gene

Lj5g3v0279280.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0279280.1 Non Characterized Hit- tr|B6SWB0|B6SWB0_MAIZE
Putative uncharacterized protein OS=Zea mays PE=2
SV=1,39.7,9e-17,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
seg,NULL,CUFF.52707.1
         (473 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g026560.1 | hydroxyproline-rich glycoprotein family protei...   826   0.0  
Medtr6g045493.1 | hydroxyproline-rich glycoprotein family protei...   141   2e-33
Medtr8g098495.1 | hydroxyproline-rich glycoprotein family protei...   123   4e-28

>Medtr1g026560.1 | hydroxyproline-rich glycoprotein family protein,
           putative | HC | chr1:8668237-8665743 | 20130731
          Length = 484

 Score =  826 bits (2134), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 399/461 (86%), Positives = 422/461 (91%)

Query: 13  RRKRWGGCWGAFSCFGSQKGGKRIVPASRIPDSNGSAAQPNGPQAVGLTNQTTGXXXXXX 72
           RRKRWGGC GAFSCF SQKGGKRIVPASRIPD+NGSA+QPNGPQ  GLTNQ TG      
Sbjct: 24  RRKRWGGCLGAFSCFSSQKGGKRIVPASRIPDNNGSASQPNGPQVAGLTNQATGIAPSLL 83

Query: 73  XXXXXXXXFTHSALPSTAQSPSCFLSLSANSPGGPSSTMFATGPYAHETQLVSPPVFSNF 132
                   FTHSALPSTAQSPSCFLSLSANSPGGPS++M+ATGPYAHETQLVSPPVFSNF
Sbjct: 84  APPSSPASFTHSALPSTAQSPSCFLSLSANSPGGPSNSMYATGPYAHETQLVSPPVFSNF 143

Query: 133 TTEPSTAPLTPPPELAHLTTPSSPDVPFAHFLSSSADLKNRDKNNYINANDLQATYSLYP 192
           TTEPSTAPLTPPPELAHLTTPSSPDVPFAHFL+SSA+LKN  K NYI ANDLQ TYSLYP
Sbjct: 144 TTEPSTAPLTPPPELAHLTTPSSPDVPFAHFLTSSANLKNGGKGNYITANDLQTTYSLYP 203

Query: 193 GSPASSLISPISRNSGDCLSSSFPEREFRPQWNSSIPLENGKYQRTGSGRVSGHDTNSVT 252
           GSPASSLISPISRNSGDCLS+SFPEREFRPQW+SS+  ENGKYQRTGSGRVSGHDTN VT
Sbjct: 204 GSPASSLISPISRNSGDCLSTSFPEREFRPQWDSSLYPENGKYQRTGSGRVSGHDTNDVT 263

Query: 253 IASQDTNFFCPATYAQFYLDQNPPFPHNGGRLSVSKDSDVQSTGGNGHQSRHARSPKQDV 312
           +ASQDTNFFCPATYAQFYLDQNPPFPHNGGRLSVSKDSD QSTGGNGHQSR +RSPKQDV
Sbjct: 264 MASQDTNFFCPATYAQFYLDQNPPFPHNGGRLSVSKDSDAQSTGGNGHQSRPSRSPKQDV 323

Query: 313 EEIEAYRASFGFSADEIISTSQYVEISDVMDDSFTMMPFTTGKSAMEESIEPSLMKGFKA 372
           EEIEAYRASFGFSADEII+TSQYVEISDVMDDSFTMMP T+GKS MEE+IEPSLMK FKA
Sbjct: 324 EEIEAYRASFGFSADEIITTSQYVEISDVMDDSFTMMPLTSGKSMMEENIEPSLMKEFKA 383

Query: 373 HETHVAMQNLKSLRLDPGPVGKEARSPVPICHGYEDNKSPGYCSNSSGLSTPENHTLLDD 432
           HET V +QNLK LRLD  PVGK+A++ VPICHGYED+KSPGYCSNSSGLSTP+NHTL+DD
Sbjct: 384 HETQVGLQNLKCLRLDASPVGKQAKNQVPICHGYEDHKSPGYCSNSSGLSTPDNHTLMDD 443

Query: 433 EDIFSKMGSSRICRKYQMGLSCSDAEVDYRRGRSLREGKGI 473
           EDIFSK+GSSRICRKYQMGLSCSDAEVDYRRGRSLRE KGI
Sbjct: 444 EDIFSKLGSSRICRKYQMGLSCSDAEVDYRRGRSLRERKGI 484


>Medtr6g045493.1 | hydroxyproline-rich glycoprotein family protein |
           HC | chr6:16415254-16411073 | 20130731
          Length = 487

 Score =  141 bits (355), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 101/241 (41%), Positives = 125/241 (51%), Gaps = 18/241 (7%)

Query: 1   MGSEQNRFPQHERRKRWGGCWGAFSCFGSQ-KGGKRIVPASRIPDSNGSAAQPNGPQAVG 59
           + +E    P    +KRWG C+   SCFGS  K  KRI  A  +P+       P  P A  
Sbjct: 20  VSAESRVQPTSSPKKRWGSCFSLPSCFGSHNKTSKRIGHAVLVPE----PVAPTVPVANA 75

Query: 60  LTNQTTGXXXXXXXXXXXXXXFTHSALPSTAQSPSC------FLSLSANSPGGPSSTMFA 113
             N +T               F  S  PS+  SP+        LS +A S  GP+S MF 
Sbjct: 76  APNPSTAIVIPFIAPPSSPASFLQSDPPSSTHSPAAGLLSLSSLSANAYSTSGPAS-MFT 134

Query: 114 TGPYAHETQLVSPPVFSNFTTEPSTAPLTPPPELAHLTTPSSPDVPFAHFLSSSADLKNR 173
            GPYA+ETQLVSPPVFSNFTTEPSTA  TPPPE   +TTPSSP+VPFA  L+SS D   +
Sbjct: 135 IGPYAYETQLVSPPVFSNFTTEPSTANFTPPPESVLMTTPSSPEVPFAQLLASSLDRARK 194

Query: 174 DKNNYINANDLQATYSLYPGSPASSLISPISRNSGDCLSSSFPEREFRPQWNSSIPLENG 233
             + +   N     Y  YPGSP + L+SP S  S    S+ FP+R       SS+ L  G
Sbjct: 195 SNHKFALYNYEYQPYQQYPGSPGAQLVSPGSVISTSGTSTPFPDRR------SSLELRKG 248

Query: 234 K 234
           +
Sbjct: 249 E 249


>Medtr8g098495.1 | hydroxyproline-rich glycoprotein family protein |
           HC | chr8:41086006-41083003 | 20130731
          Length = 460

 Score =  123 bits (308), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 96/216 (44%), Positives = 112/216 (51%), Gaps = 17/216 (7%)

Query: 13  RRKRWGGCWGAFSCFGSQKGG-KRIVPASRIPDSNGSAAQPNGPQAVGLTNQTT-GXXXX 70
           ++K+WG       CFG QK   KRI  A  +P++  + A      AV  T Q        
Sbjct: 42  QKKKWGNWLNITGCFGYQKNNRKRIGHAVLVPETTPTGADA-AANAVSSTAQAPPSITLP 100

Query: 71  XXXXXXXXXXFTHSALPSTAQSPSCFLS-----LSANSPGGPSSTMFATGPYAHETQLVS 125
                     F  S  PSTAQSP   LS      S  SPGGP+S +FA GPYAHETQLVS
Sbjct: 101 FIAPPSSPASFFQSEPPSTAQSPVGILSKTSVSASMYSPGGPNS-IFAIGPYAHETQLVS 159

Query: 126 PPVFSNFTTEPSTAPLTPPPELAHLTTPSSPDVPFAHFLSSSADLKNRDKNNYINANDLQ 185
           PPVFS      STAP TPPPE  HLTTPSSP+VPFA    S++      +   I+  D Q
Sbjct: 160 PPVFS----ASSTAPFTPPPESVHLTTPSSPEVPFAQLFDSNSRNSETYQRLQISHYDFQ 215

Query: 186 ATYSLYPGSPASSLISPISRNSGDCLSSSFPEREFR 221
             Y   PGSP   LISP S  SG   SS  P+ EF+
Sbjct: 216 -NYQFQPGSPVGPLISPRSAISG--TSSPLPD-EFK 247