Miyakogusa Predicted Gene

Lj5g3v0255610.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0255610.1 tr|Q015K9|Q015K9_OSTTA Complex 1 family protein /
LVR family protein (ISS) OS=Ostreococcus tauri
GN=,41.8,2e-16,seg,NULL; Complex1_LYR,Complex 1 LYR
protein,CUFF.52685.1
         (156 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g026078.2 | complex 1 protein, LYR family protein | HC | c...   179   1e-45
Medtr1g026078.1 | complex 1 protein, LYR family protein | HC | c...   179   1e-45

>Medtr1g026078.2 | complex 1 protein, LYR family protein | HC |
           chr1:8413910-8410912 | 20130731
          Length = 159

 Score =  179 bits (453), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 96/151 (63%), Positives = 115/151 (76%), Gaps = 9/151 (5%)

Query: 1   MRGKVEKWRSIWSQIDGKARQQGC---RLLHEGPDTMEELLDRHLVXXXXXXXXXXXXEL 57
           MRGK   WRS+W+  + K +   C   RLLH+GPDT+EELL+RHLV            EL
Sbjct: 1   MRGK---WRSLWNS-NLKPKTVNCCAWRLLHDGPDTVEELLERHLVKKVINDDEEE--EL 54

Query: 58  LNQRRVTSPRRGALSLYRDVLPASRFFTWPDSNGVLWRDVLRESARKEFESARFETDPEV 117
           LN+RR+TS RR ALSLYRD+L ASRFFTW D+ GVLWRD+L++SARKEFE ARFETDPE+
Sbjct: 55  LNRRRLTSTRREALSLYRDILRASRFFTWHDTKGVLWRDLLKDSARKEFELARFETDPEI 114

Query: 118 VTRLLIGGNEAVQSAVDKLVEKQKQQTLKDR 148
           VTRLLIGG EAV +A+DKL EKQ++Q  KDR
Sbjct: 115 VTRLLIGGREAVNNAIDKLAEKQREQIQKDR 145


>Medtr1g026078.1 | complex 1 protein, LYR family protein | HC |
           chr1:8413910-8410910 | 20130731
          Length = 159

 Score =  179 bits (453), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 96/151 (63%), Positives = 115/151 (76%), Gaps = 9/151 (5%)

Query: 1   MRGKVEKWRSIWSQIDGKARQQGC---RLLHEGPDTMEELLDRHLVXXXXXXXXXXXXEL 57
           MRGK   WRS+W+  + K +   C   RLLH+GPDT+EELL+RHLV            EL
Sbjct: 1   MRGK---WRSLWNS-NLKPKTVNCCAWRLLHDGPDTVEELLERHLVKKVINDDEEE--EL 54

Query: 58  LNQRRVTSPRRGALSLYRDVLPASRFFTWPDSNGVLWRDVLRESARKEFESARFETDPEV 117
           LN+RR+TS RR ALSLYRD+L ASRFFTW D+ GVLWRD+L++SARKEFE ARFETDPE+
Sbjct: 55  LNRRRLTSTRREALSLYRDILRASRFFTWHDTKGVLWRDLLKDSARKEFELARFETDPEI 114

Query: 118 VTRLLIGGNEAVQSAVDKLVEKQKQQTLKDR 148
           VTRLLIGG EAV +A+DKL EKQ++Q  KDR
Sbjct: 115 VTRLLIGGREAVNNAIDKLAEKQREQIQKDR 145