Miyakogusa Predicted Gene

Lj5g3v0254350.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0254350.1 Non Characterized Hit- tr|K3Z0S8|K3Z0S8_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si020145,62.34,4e-19,Complex1_LYR,Complex 1 LYR protein; FAMILY NOT
NAMED,LYR motif-containing protein 2,CUFF.52670.1
         (77 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g026100.1 | LYR family of Fe/S cluster biogenesis protein ...   134   2e-32

>Medtr1g026100.1 | LYR family of Fe/S cluster biogenesis protein |
          HC | chr1:8429355-8428388 | 20130731
          Length = 77

 Score =  134 bits (336), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 63/77 (81%), Positives = 71/77 (92%)

Query: 1  MDLQDFLIRARVLKLFRQALRIAGRAPSSARAELRQTVRQEMENNRNCNDKQRIRYLISD 60
          MDLQDFLIRAR+ KL+RQALR+A RAP  AR ELRQT+RQE+E NRNCNDKQRIR+LIS+
Sbjct: 1  MDLQDFLIRARIFKLYRQALRVAARAPPPARGELRQTIRQEIEINRNCNDKQRIRFLISE 60

Query: 61 GLERLKRLDEMLDMQGH 77
          GLE+LKRLDEMLDMQGH
Sbjct: 61 GLEKLKRLDEMLDMQGH 77