Miyakogusa Predicted Gene
- Lj5g3v0240210.3
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v0240210.3 Non Characterized Hit- tr|I1MY43|I1MY43_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,93.62,0,VACUOLAR
SORTING PROTEIN 35,Vacuolar protein sorting-associated protein 35;
seg,NULL; Vps35,Vacuolar,CUFF.52774.3
(329 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g025610.1 | vacuolar protein sorting-associated 35A-like p... 586 e-167
Medtr1g025610.2 | vacuolar protein sorting-associated 35A-like p... 585 e-167
Medtr5g022610.1 | vacuolar protein sorting-associated 35A-like p... 505 e-143
Medtr5g022610.2 | vacuolar protein sorting-associated 35A-like p... 463 e-131
>Medtr1g025610.1 | vacuolar protein sorting-associated 35A-like
protein | HC | chr1:8204815-8194669 | 20130731
Length = 791
Score = 586 bits (1510), Expect = e-167, Method: Compositional matrix adjust.
Identities = 293/329 (89%), Positives = 307/329 (93%)
Query: 1 MPIVGAIALHVSLLTFTLRVHPDQLDYVDQVLGSCVKKLSGKPKLDDNRATKQVVALLSA 60
MPIVGAIALHVSLLTFTLRVHPD+LDYVDQVLGSCV KLSGKPKLDDNRATKQVVALLSA
Sbjct: 340 MPIVGAIALHVSLLTFTLRVHPDRLDYVDQVLGSCVNKLSGKPKLDDNRATKQVVALLSA 399
Query: 61 PLDKYNDVVTALTLSNYPRVMDHLDNETNKVMAMVIIQSIMKNNTCISNADKVEVLFELI 120
PLDKYNDVVTALTLSNYPRVMDHLDN TNK+MA+VIIQSIMKNNT IS ADKVEVLFELI
Sbjct: 400 PLDKYNDVVTALTLSNYPRVMDHLDNVTNKLMALVIIQSIMKNNTYISTADKVEVLFELI 459
Query: 121 KGLITDLDGTAXXXXXXXXFNEEQNSVARLIHMLHNNDPEEMFKIICTVKKHIMNGGPKR 180
KGLI DLDGT+ F+EEQNSVARLI+MLHNNDPEEMFKIICTV+KHIM GGP+R
Sbjct: 460 KGLIIDLDGTSEDEIDEEDFSEEQNSVARLINMLHNNDPEEMFKIICTVRKHIMIGGPRR 519
Query: 181 LPFTVPSLIFSALRLIRQLQGQDGDVVGEEVPLTPKKIFQLLNEIIEALSSVSSPELALR 240
LPFTVPSLIFSAL+LIRQLQGQ GD+ GEE P TP+KIFQLLNE IE LSSVSS ELALR
Sbjct: 520 LPFTVPSLIFSALKLIRQLQGQGGDIAGEEEPATPRKIFQLLNETIEVLSSVSSSELALR 579
Query: 241 LYLQCAEAANDCELEPVAYEFFTQAFVLYEEEIADSKAQVTAIHLIIGTLQRMNVFGVEN 300
LYL CAEAANDC+LEPVAYEFFTQAFVLYEEEIADSKAQVTAIHLIIGTLQRM++FGVEN
Sbjct: 580 LYLHCAEAANDCDLEPVAYEFFTQAFVLYEEEIADSKAQVTAIHLIIGTLQRMSIFGVEN 639
Query: 301 RDTLTHKATGYSAKLLKKPDQCRAVYACS 329
RDTLTHKATGYSAKLLKKPDQCRAVYACS
Sbjct: 640 RDTLTHKATGYSAKLLKKPDQCRAVYACS 668
>Medtr1g025610.2 | vacuolar protein sorting-associated 35A-like
protein | HC | chr1:8204815-8194669 | 20130731
Length = 727
Score = 585 bits (1508), Expect = e-167, Method: Compositional matrix adjust.
Identities = 293/329 (89%), Positives = 307/329 (93%)
Query: 1 MPIVGAIALHVSLLTFTLRVHPDQLDYVDQVLGSCVKKLSGKPKLDDNRATKQVVALLSA 60
MPIVGAIALHVSLLTFTLRVHPD+LDYVDQVLGSCV KLSGKPKLDDNRATKQVVALLSA
Sbjct: 276 MPIVGAIALHVSLLTFTLRVHPDRLDYVDQVLGSCVNKLSGKPKLDDNRATKQVVALLSA 335
Query: 61 PLDKYNDVVTALTLSNYPRVMDHLDNETNKVMAMVIIQSIMKNNTCISNADKVEVLFELI 120
PLDKYNDVVTALTLSNYPRVMDHLDN TNK+MA+VIIQSIMKNNT IS ADKVEVLFELI
Sbjct: 336 PLDKYNDVVTALTLSNYPRVMDHLDNVTNKLMALVIIQSIMKNNTYISTADKVEVLFELI 395
Query: 121 KGLITDLDGTAXXXXXXXXFNEEQNSVARLIHMLHNNDPEEMFKIICTVKKHIMNGGPKR 180
KGLI DLDGT+ F+EEQNSVARLI+MLHNNDPEEMFKIICTV+KHIM GGP+R
Sbjct: 396 KGLIIDLDGTSEDEIDEEDFSEEQNSVARLINMLHNNDPEEMFKIICTVRKHIMIGGPRR 455
Query: 181 LPFTVPSLIFSALRLIRQLQGQDGDVVGEEVPLTPKKIFQLLNEIIEALSSVSSPELALR 240
LPFTVPSLIFSAL+LIRQLQGQ GD+ GEE P TP+KIFQLLNE IE LSSVSS ELALR
Sbjct: 456 LPFTVPSLIFSALKLIRQLQGQGGDIAGEEEPATPRKIFQLLNETIEVLSSVSSSELALR 515
Query: 241 LYLQCAEAANDCELEPVAYEFFTQAFVLYEEEIADSKAQVTAIHLIIGTLQRMNVFGVEN 300
LYL CAEAANDC+LEPVAYEFFTQAFVLYEEEIADSKAQVTAIHLIIGTLQRM++FGVEN
Sbjct: 516 LYLHCAEAANDCDLEPVAYEFFTQAFVLYEEEIADSKAQVTAIHLIIGTLQRMSIFGVEN 575
Query: 301 RDTLTHKATGYSAKLLKKPDQCRAVYACS 329
RDTLTHKATGYSAKLLKKPDQCRAVYACS
Sbjct: 576 RDTLTHKATGYSAKLLKKPDQCRAVYACS 604
>Medtr5g022610.1 | vacuolar protein sorting-associated 35A-like
protein | HC | chr5:8929672-8917693 | 20130731
Length = 794
Score = 505 bits (1301), Expect = e-143, Method: Compositional matrix adjust.
Identities = 246/333 (73%), Positives = 280/333 (84%), Gaps = 4/333 (1%)
Query: 1 MPIVGAIALHVSLLTFTLRVHPDQLDYVDQVLGSCVKKLSGKPKLDDNRATKQVVALLSA 60
MP G + L+ SLLTFTL VHPD+LDY DQVLG+CVK LSGK K++D +ATKQ+VALLSA
Sbjct: 339 MPTAGVVTLYSSLLTFTLHVHPDRLDYADQVLGACVKNLSGKGKIEDKKATKQIVALLSA 398
Query: 61 PLDKYNDVVTALTLSNYPRVMDHLDNETNKVMAMVIIQSIMKNNTCISNADKVEVLFELI 120
PL+KYND++TAL LSNYP VM+ LD TNKVMA VIIQSIMKN T IS +DKVE LFELI
Sbjct: 399 PLEKYNDIMTALKLSNYPHVMEFLDVPTNKVMATVIIQSIMKNGTRISTSDKVESLFELI 458
Query: 121 KGLITDLDGTAXXXXXXXXFNEEQNSVARLIHMLHNNDPEEMFKIICTVKKHIMNGGPKR 180
KGLI D DGT F EEQNSVARLI M +N+DPEEM KII TV+KHI+ GGPKR
Sbjct: 459 KGLIKDSDGTPDDELDEDDFKEEQNSVARLIQMFYNDDPEEMLKIIETVRKHILTGGPKR 518
Query: 181 LPFTVPSLIFSALRLIRQLQG----QDGDVVGEEVPLTPKKIFQLLNEIIEALSSVSSPE 236
LPFTVP L+FS+L+L+RQLQG Q+ + G++ +PKKIFQLLN+ IE LS V +PE
Sbjct: 519 LPFTVPPLMFSSLKLVRQLQGQSQSQEENPFGDDASTSPKKIFQLLNQTIETLSGVLAPE 578
Query: 237 LALRLYLQCAEAANDCELEPVAYEFFTQAFVLYEEEIADSKAQVTAIHLIIGTLQRMNVF 296
LAL+L LQCAEAANDCELEPVAYEFFTQA++LYEEEI+DS+AQVTAIHLIIGTLQRM+VF
Sbjct: 579 LALQLCLQCAEAANDCELEPVAYEFFTQAYILYEEEISDSRAQVTAIHLIIGTLQRMHVF 638
Query: 297 GVENRDTLTHKATGYSAKLLKKPDQCRAVYACS 329
GVENRDTLTHKATGYSAKLLKKPDQCRAVYACS
Sbjct: 639 GVENRDTLTHKATGYSAKLLKKPDQCRAVYACS 671
>Medtr5g022610.2 | vacuolar protein sorting-associated 35A-like
protein | HC | chr5:8929660-8917693 | 20130731
Length = 672
Score = 463 bits (1192), Expect = e-131, Method: Compositional matrix adjust.
Identities = 227/314 (72%), Positives = 261/314 (83%), Gaps = 4/314 (1%)
Query: 1 MPIVGAIALHVSLLTFTLRVHPDQLDYVDQVLGSCVKKLSGKPKLDDNRATKQVVALLSA 60
MP G + L+ SLLTFTL VHPD+LDY DQVLG+CVK LSGK K++D +ATKQ+VALLSA
Sbjct: 339 MPTAGVVTLYSSLLTFTLHVHPDRLDYADQVLGACVKNLSGKGKIEDKKATKQIVALLSA 398
Query: 61 PLDKYNDVVTALTLSNYPRVMDHLDNETNKVMAMVIIQSIMKNNTCISNADKVEVLFELI 120
PL+KYND++TAL LSNYP VM+ LD TNKVMA VIIQSIMKN T IS +DKVE LFELI
Sbjct: 399 PLEKYNDIMTALKLSNYPHVMEFLDVPTNKVMATVIIQSIMKNGTRISTSDKVESLFELI 458
Query: 121 KGLITDLDGTAXXXXXXXXFNEEQNSVARLIHMLHNNDPEEMFKIICTVKKHIMNGGPKR 180
KGLI D DGT F EEQNSVARLI M +N+DPEEM KII TV+KHI+ GGPKR
Sbjct: 459 KGLIKDSDGTPDDELDEDDFKEEQNSVARLIQMFYNDDPEEMLKIIETVRKHILTGGPKR 518
Query: 181 LPFTVPSLIFSALRLIRQLQG----QDGDVVGEEVPLTPKKIFQLLNEIIEALSSVSSPE 236
LPFTVP L+FS+L+L+RQLQG Q+ + G++ +PKKIFQLLN+ IE LS V +PE
Sbjct: 519 LPFTVPPLMFSSLKLVRQLQGQSQSQEENPFGDDASTSPKKIFQLLNQTIETLSGVLAPE 578
Query: 237 LALRLYLQCAEAANDCELEPVAYEFFTQAFVLYEEEIADSKAQVTAIHLIIGTLQRMNVF 296
LAL+L LQCAEAANDCELEPVAYEFFTQA++LYEEEI+DS+AQVTAIHLIIGTLQRM+VF
Sbjct: 579 LALQLCLQCAEAANDCELEPVAYEFFTQAYILYEEEISDSRAQVTAIHLIIGTLQRMHVF 638
Query: 297 GVENRDTLTHKATG 310
GVENRDTLTHKATG
Sbjct: 639 GVENRDTLTHKATG 652