Miyakogusa Predicted Gene

Lj5g3v0218110.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0218110.1 Non Characterized Hit- tr|Q5JL26|Q5JL26_ORYSJ
Putative uncharacterized protein P0682B08.32 OS=Oryza ,40.12,9e-18,no
description,Tetratricopeptide-like helical; PCDC2 (PROGRAMMED CELL
DEATH PROTEIN
2)-RELATED,NULL;,NODE_41648_length_980_cov_119.596939.path2.1
         (246 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g080640.1 | HCP family protein with MYND-type zinc finger ...   347   9e-96
Medtr3g085330.1 | HCP family protein with MYND-type zinc finger ...   332   1e-91
Medtr3g099300.2 | HCP family protein with MYND-type zinc finger ...   267   7e-72
Medtr3g099300.1 | HCP family protein with MYND-type zinc finger ...   266   9e-72
Medtr2g045135.1 | HCP family protein with MYND-type zinc finger ...   266   9e-72
Medtr2g045140.2 | HCP family protein with MYND-type zinc finger ...   223   2e-58
Medtr2g045140.3 | HCP family protein with MYND-type zinc finger ...   222   2e-58
Medtr2g045140.1 | HCP family protein with MYND-type zinc finger ...   221   3e-58
Medtr2g045140.4 | HCP family protein with MYND-type zinc finger ...   190   1e-48

>Medtr8g080640.1 | HCP family protein with MYND-type zinc finger
           protein | HC | chr8:34684620-34682760 | 20130731
          Length = 381

 Score =  347 bits (889), Expect = 9e-96,   Method: Compositional matrix adjust.
 Identities = 172/230 (74%), Positives = 187/230 (81%), Gaps = 7/230 (3%)

Query: 1   MIRFYCLQNRGSGASLMAKAAISSHARALYSLAVIQFNGSGGTKSDKDLRAGVALCARAA 60
           MIRFYCLQNRGSGASLMAKAA++SHARALYSLAVIQFNGSGGTKSDKDLRAGVALCARAA
Sbjct: 136 MIRFYCLQNRGSGASLMAKAAMNSHARALYSLAVIQFNGSGGTKSDKDLRAGVALCARAA 195

Query: 61  FLGHIDALREIGHCLQDGYGCRKNIIEGRRFLIEANARELAAVMXXXXXXXXXXXXXXXX 120
           FLGHIDALRE+GHCLQDGYG ++NI EGRRFLI+ANARELAAV+                
Sbjct: 196 FLGHIDALRELGHCLQDGYGVKQNIAEGRRFLIQANARELAAVL-----STGAAAPAARQ 250

Query: 121 XXTWSLHPQQRHLP-SGAPLLSDFGWNVPEPEPHPANRFMTEWFAAKDDVPGPGLSLCSH 179
             + +   Q RH+  SG PLLSDFG NVP PEPHPA++FMTEWF+ +   PGPGL LCSH
Sbjct: 251 LVSTNFQSQLRHVAVSGCPLLSDFGCNVPAPEPHPASKFMTEWFSVRGGSPGPGLRLCSH 310

Query: 180 MGCGRPETRNREFRRCSVCGTVNYCSRACQALDWKLRHKVECAAPMERLL 229
            GCGRPETR  EFRRCSVCG VNYCSRACQALDWK RHK EC AP+ER L
Sbjct: 311 AGCGRPETRKHEFRRCSVCGAVNYCSRACQALDWKFRHKAEC-APVERWL 359


>Medtr3g085330.1 | HCP family protein with MYND-type zinc finger
           protein | HC | chr3:38568194-38569628 | 20130731
          Length = 364

 Score =  332 bits (852), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 167/242 (69%), Positives = 183/242 (75%), Gaps = 21/242 (8%)

Query: 1   MIRFYCLQNRGSGASLMAKAAISSHARALYSLAVIQFNGSGGTKSDKDLRAGVALCARAA 60
           MIRFYCLQNRGSGASLMAKAA+ SHA +LYSLAVIQFNGSGGTK+DKDLRAGVALCARAA
Sbjct: 107 MIRFYCLQNRGSGASLMAKAAMKSHAPSLYSLAVIQFNGSGGTKNDKDLRAGVALCARAA 166

Query: 61  FLGHIDALREIGHCLQDGYGCRKNIIEGRRFLIEANARELAAVMXXXXXXXXXXXXXXXX 120
           FLGHID LRE+GHCLQDGYG ++N+IEGRRFL++ANARELAAV+                
Sbjct: 167 FLGHIDGLRELGHCLQDGYGVKQNVIEGRRFLVQANARELAAVL-------SNGNNNKQP 219

Query: 121 XXTWSLHPQQRHLP-------------SGAPLLSDFGWNVPEPEPHPANRFMTEWFAAKD 167
             TWS++P     P             SG PLLSDFG NVP  E HPANRFMTEWF  + 
Sbjct: 220 LLTWSVNPGSSQPPQLRVLAGAGSVSGSGCPLLSDFGCNVPVQETHPANRFMTEWFDIRG 279

Query: 168 DVPGPGLSLCSHMGCGRPETRNREFRRCSVCGTVNYCSRACQALDWKLRHKVECAAPMER 227
             PGPG+ LCS+ GCGRPETR  EFRRCSVCG VNYCSRACQALDWK RHK EC AP+ER
Sbjct: 280 GFPGPGMRLCSNSGCGRPETRKHEFRRCSVCGVVNYCSRACQALDWKFRHKAEC-APVER 338

Query: 228 LL 229
            L
Sbjct: 339 WL 340


>Medtr3g099300.2 | HCP family protein with MYND-type zinc finger
           protein | HC | chr3:45519237-45520950 | 20130731
          Length = 291

 Score =  267 bits (682), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 136/226 (60%), Positives = 158/226 (69%), Gaps = 8/226 (3%)

Query: 1   MIRFYCLQNRGSGASLMAKAAISSHARALYSLAVIQFNGSGGTKSDKDLRAGVALCARAA 60
           MIRFYCL+NR SG SL+AKAA+  HA ALYSLAVIQFNGSGGTK DKDLRAGVAL ARA+
Sbjct: 43  MIRFYCLRNRRSGVSLIAKAAMKLHAPALYSLAVIQFNGSGGTKQDKDLRAGVALSARAS 102

Query: 61  FLGHIDALREIGHCLQDGYGCRKNIIEGRRFLIEANARELAAVMXXXXXXXXXXXXXXXX 120
            LGHIDALRE+GHCLQDGYG ++N+ EGRR L++AN RE+  V                 
Sbjct: 103 LLGHIDALRELGHCLQDGYGVKQNVTEGRRLLVQANVREILLVYRFLELASPSRAGSCEG 162

Query: 121 XXTWSLHPQQRHLPSGAPLLSDFGWNVPEPEPHPANRFMTEWFAAKDDVPGPGLSLCSHM 180
             +       R      PL+ +  +NV  PE HP N F+ EWF +   +   GL LC+H+
Sbjct: 163 ILS-------RLSNMAVPLIKENRYNVKVPEVHPVNWFLREWFESGLGILEDGLRLCAHI 215

Query: 181 GCGRPETRNREFRRCSVCGTVNYCSRACQALDWKLRHKVECAAPME 226
           GCGR ETR  EFRRCSVCG VNYCSRACQALDWKLRHK+EC +PME
Sbjct: 216 GCGRAETRPHEFRRCSVCGKVNYCSRACQALDWKLRHKMEC-SPME 260


>Medtr3g099300.1 | HCP family protein with MYND-type zinc finger
           protein | HC | chr3:45519237-45520950 | 20130731
          Length = 351

 Score =  266 bits (681), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 136/226 (60%), Positives = 158/226 (69%), Gaps = 8/226 (3%)

Query: 1   MIRFYCLQNRGSGASLMAKAAISSHARALYSLAVIQFNGSGGTKSDKDLRAGVALCARAA 60
           MIRFYCL+NR SG SL+AKAA+  HA ALYSLAVIQFNGSGGTK DKDLRAGVAL ARA+
Sbjct: 103 MIRFYCLRNRRSGVSLIAKAAMKLHAPALYSLAVIQFNGSGGTKQDKDLRAGVALSARAS 162

Query: 61  FLGHIDALREIGHCLQDGYGCRKNIIEGRRFLIEANARELAAVMXXXXXXXXXXXXXXXX 120
            LGHIDALRE+GHCLQDGYG ++N+ EGRR L++AN RE+  V                 
Sbjct: 163 LLGHIDALRELGHCLQDGYGVKQNVTEGRRLLVQANVREILLVYRFLELASPSRAGSCEG 222

Query: 121 XXTWSLHPQQRHLPSGAPLLSDFGWNVPEPEPHPANRFMTEWFAAKDDVPGPGLSLCSHM 180
             +       R      PL+ +  +NV  PE HP N F+ EWF +   +   GL LC+H+
Sbjct: 223 ILS-------RLSNMAVPLIKENRYNVKVPEVHPVNWFLREWFESGLGILEDGLRLCAHI 275

Query: 181 GCGRPETRNREFRRCSVCGTVNYCSRACQALDWKLRHKVECAAPME 226
           GCGR ETR  EFRRCSVCG VNYCSRACQALDWKLRHK+EC +PME
Sbjct: 276 GCGRAETRPHEFRRCSVCGKVNYCSRACQALDWKLRHKMEC-SPME 320


>Medtr2g045135.1 | HCP family protein with MYND-type zinc finger
           protein | HC | chr2:19833991-19832443 | 20130731
          Length = 351

 Score =  266 bits (681), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 136/226 (60%), Positives = 158/226 (69%), Gaps = 8/226 (3%)

Query: 1   MIRFYCLQNRGSGASLMAKAAISSHARALYSLAVIQFNGSGGTKSDKDLRAGVALCARAA 60
           MIRFYCL+NR SG SL+AKAA+  HA ALYSLAVIQFNGSGGTK DKDLRAGVAL ARA+
Sbjct: 103 MIRFYCLRNRRSGVSLIAKAAMKLHAPALYSLAVIQFNGSGGTKQDKDLRAGVALSARAS 162

Query: 61  FLGHIDALREIGHCLQDGYGCRKNIIEGRRFLIEANARELAAVMXXXXXXXXXXXXXXXX 120
            LGHIDALRE+GHCLQDGYG ++N+ EGRR L++AN RE+  V                 
Sbjct: 163 LLGHIDALRELGHCLQDGYGVKQNVTEGRRLLVQANVREILLVYRFLELASPSRAGSCEG 222

Query: 121 XXTWSLHPQQRHLPSGAPLLSDFGWNVPEPEPHPANRFMTEWFAAKDDVPGPGLSLCSHM 180
             +       R      PL+ +  +NV  PE HP N F+ EWF +   +   GL LC+H+
Sbjct: 223 ILS-------RLSNMAVPLIKENRYNVKVPEVHPVNWFLREWFESGLGILEDGLRLCAHI 275

Query: 181 GCGRPETRNREFRRCSVCGTVNYCSRACQALDWKLRHKVECAAPME 226
           GCGR ETR  EFRRCSVCG VNYCSRACQALDWKLRHK+EC +PME
Sbjct: 276 GCGRAETRPHEFRRCSVCGKVNYCSRACQALDWKLRHKMEC-SPME 320


>Medtr2g045140.2 | HCP family protein with MYND-type zinc finger
           protein | HC | chr2:19635531-19634089 | 20130731
          Length = 242

 Score =  223 bits (567), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 115/212 (54%), Positives = 136/212 (64%), Gaps = 7/212 (3%)

Query: 1   MIRFYCLQNRGSGASLMAKAAISSHARALYSLAVIQFNGSGGTKSDKDLRAGVALCARAA 60
           MIRFYCL+NR SG SL+AKAA+  HA ALYSLAVIQFNGSGGTK DKDLRAGVAL ARA+
Sbjct: 1   MIRFYCLRNRRSGVSLIAKAAMKLHAPALYSLAVIQFNGSGGTKQDKDLRAGVALSARAS 60

Query: 61  FLGHIDALREIGHCLQDGYGCRKNIIEGRRFLIEANARELAAVMXXXXXXXXXXXXXXXX 120
            LGHIDALRE+GHCLQDGYG ++N+ EGRR L++AN RE+  V                 
Sbjct: 61  LLGHIDALRELGHCLQDGYGVKQNVTEGRRLLVQANVREILLVYRFLELASPSRAGSCEG 120

Query: 121 XXTWSLHPQQRHLPSGAPLLSDFGWNVPEPEPHPANRFMTEWFAAKDDVPGPGLSLCSHM 180
             +       R      PL+ +  +NV  PE HP N F+ EWF +   +   GL LC+H+
Sbjct: 121 ILS-------RLSNMAVPLIKENRYNVKVPEVHPVNWFLREWFESGLGILEDGLRLCAHI 173

Query: 181 GCGRPETRNREFRRCSVCGTVNYCSRACQALD 212
           GCGR ETR  EFRRCSVCG     S   Q + 
Sbjct: 174 GCGRAETRPHEFRRCSVCGISGVISVCVQLVQ 205


>Medtr2g045140.3 | HCP family protein with MYND-type zinc finger
           protein | HC | chr2:19635531-19634061 | 20130731
          Length = 284

 Score =  222 bits (566), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 115/212 (54%), Positives = 136/212 (64%), Gaps = 7/212 (3%)

Query: 1   MIRFYCLQNRGSGASLMAKAAISSHARALYSLAVIQFNGSGGTKSDKDLRAGVALCARAA 60
           MIRFYCL+NR SG SL+AKAA+  HA ALYSLAVIQFNGSGGTK DKDLRAGVAL ARA+
Sbjct: 43  MIRFYCLRNRRSGVSLIAKAAMKLHAPALYSLAVIQFNGSGGTKQDKDLRAGVALSARAS 102

Query: 61  FLGHIDALREIGHCLQDGYGCRKNIIEGRRFLIEANARELAAVMXXXXXXXXXXXXXXXX 120
            LGHIDALRE+GHCLQDGYG ++N+ EGRR L++AN RE+  V                 
Sbjct: 103 LLGHIDALRELGHCLQDGYGVKQNVTEGRRLLVQANVREILLVYRFLELASPSRAGSCEG 162

Query: 121 XXTWSLHPQQRHLPSGAPLLSDFGWNVPEPEPHPANRFMTEWFAAKDDVPGPGLSLCSHM 180
             +       R      PL+ +  +NV  PE HP N F+ EWF +   +   GL LC+H+
Sbjct: 163 ILS-------RLSNMAVPLIKENRYNVKVPEVHPVNWFLREWFESGLGILEDGLRLCAHI 215

Query: 181 GCGRPETRNREFRRCSVCGTVNYCSRACQALD 212
           GCGR ETR  EFRRCSVCG     S   Q + 
Sbjct: 216 GCGRAETRPHEFRRCSVCGISGVISVCVQLVQ 247


>Medtr2g045140.1 | HCP family protein with MYND-type zinc finger
           protein | HC | chr2:19635531-19634020 | 20130731
          Length = 344

 Score =  221 bits (564), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 115/212 (54%), Positives = 136/212 (64%), Gaps = 7/212 (3%)

Query: 1   MIRFYCLQNRGSGASLMAKAAISSHARALYSLAVIQFNGSGGTKSDKDLRAGVALCARAA 60
           MIRFYCL+NR SG SL+AKAA+  HA ALYSLAVIQFNGSGGTK DKDLRAGVAL ARA+
Sbjct: 103 MIRFYCLRNRRSGVSLIAKAAMKLHAPALYSLAVIQFNGSGGTKQDKDLRAGVALSARAS 162

Query: 61  FLGHIDALREIGHCLQDGYGCRKNIIEGRRFLIEANARELAAVMXXXXXXXXXXXXXXXX 120
            LGHIDALRE+GHCLQDGYG ++N+ EGRR L++AN RE+  V                 
Sbjct: 163 LLGHIDALRELGHCLQDGYGVKQNVTEGRRLLVQANVREILLVYRFLELASPSRAGSCEG 222

Query: 121 XXTWSLHPQQRHLPSGAPLLSDFGWNVPEPEPHPANRFMTEWFAAKDDVPGPGLSLCSHM 180
             +       R      PL+ +  +NV  PE HP N F+ EWF +   +   GL LC+H+
Sbjct: 223 ILS-------RLSNMAVPLIKENRYNVKVPEVHPVNWFLREWFESGLGILEDGLRLCAHI 275

Query: 181 GCGRPETRNREFRRCSVCGTVNYCSRACQALD 212
           GCGR ETR  EFRRCSVCG     S   Q + 
Sbjct: 276 GCGRAETRPHEFRRCSVCGISGVISVCVQLVQ 307


>Medtr2g045140.4 | HCP family protein with MYND-type zinc finger
           protein | HC | chr2:19635531-19634089 | 20130731
          Length = 221

 Score =  190 bits (482), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 98/188 (52%), Positives = 116/188 (61%), Gaps = 7/188 (3%)

Query: 25  HARALYSLAVIQFNGSGGTKSDKDLRAGVALCARAAFLGHIDALREIGHCLQDGYGCRKN 84
           HA ALYSLAVIQFNGSGGTK DKDLRAGVAL ARA+ LGHIDALRE+GHCLQDGYG ++N
Sbjct: 4   HAPALYSLAVIQFNGSGGTKQDKDLRAGVALSARASLLGHIDALRELGHCLQDGYGVKQN 63

Query: 85  IIEGRRFLIEANARELAAVMXXXXXXXXXXXXXXXXXXTWSLHPQQRHLPSGAPLLSDFG 144
           + EGRR L++AN RE+  V                   +       R      PL+ +  
Sbjct: 64  VTEGRRLLVQANVREILLVYRFLELASPSRAGSCEGILS-------RLSNMAVPLIKENR 116

Query: 145 WNVPEPEPHPANRFMTEWFAAKDDVPGPGLSLCSHMGCGRPETRNREFRRCSVCGTVNYC 204
           +NV  PE HP N F+ EWF +   +   GL LC+H+GCGR ETR  EFRRCSVCG     
Sbjct: 117 YNVKVPEVHPVNWFLREWFESGLGILEDGLRLCAHIGCGRAETRPHEFRRCSVCGISGVI 176

Query: 205 SRACQALD 212
           S   Q + 
Sbjct: 177 SVCVQLVQ 184