Miyakogusa Predicted Gene
- Lj5g3v0196830.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v0196830.1 Non Characterized Hit- tr|B9S1E4|B9S1E4_RICCO
Auxin response factor, putative OS=Ricinus communis
GN,87.5,0,seg,NULL; AUX_IAA,AUX/IAA protein; CAD & PB1 domains,NULL;
FAMILY NOT NAMED,NULL; IAA_ARF,Aux/IAA-AR,TC76192.path2.1
(160 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr8g101360.1 | auxin response factor 2 | HC | chr8:42569517-4... 274 2e-74
Medtr4g124900.1 | auxin response factor 2 | HC | chr4:51795315-5... 194 4e-50
Medtr4g124900.2 | auxin response factor 2 | HC | chr4:51795315-5... 193 4e-50
Medtr2g043250.2 | auxin response factor 2 | HC | chr2:18843083-1... 191 2e-49
Medtr2g043250.1 | auxin response factor 2 | HC | chr2:18843526-1... 191 2e-49
Medtr8g079492.3 | auxin response factor 2 | HC | chr8:34083357-3... 136 1e-32
Medtr8g079492.1 | auxin response factor 2 | HC | chr8:34084967-3... 135 1e-32
Medtr8g079492.2 | auxin response factor 2 | HC | chr8:34084030-3... 135 1e-32
Medtr1g024025.1 | auxin response factor 2 | LC | chr1:7778460-77... 133 8e-32
Medtr2g018690.1 | auxin response factor 2 | HC | chr2:5912688-59... 132 1e-31
Medtr3g064050.2 | auxin response factor 2 | HC | chr3:28803320-2... 125 2e-29
Medtr3g064050.1 | auxin response factor 2 | HC | chr3:28806780-2... 124 3e-29
Medtr5g076270.1 | auxin response factor 2 | HC | chr5:32499847-3... 124 5e-29
Medtr4g060460.1 | auxin response factor-like protein | HC | chr4... 94 5e-20
Medtr4g060460.2 | auxin response factor-like protein | HC | chr4... 94 5e-20
Medtr2g093740.7 | auxin response factor-like protein | HC | chr2... 94 6e-20
Medtr2g093740.8 | auxin response factor-like protein | HC | chr2... 94 7e-20
Medtr2g093740.1 | auxin response factor-like protein | HC | chr2... 94 8e-20
Medtr2g093740.2 | auxin response factor-like protein | HC | chr2... 93 8e-20
Medtr8g100050.1 | auxin response factor 2 | HC | chr8:40230869-4... 93 1e-19
Medtr7g062540.1 | auxin response factor 2 | HC | chr7:22756278-2... 89 2e-18
Medtr4g021580.1 | auxin response factor 2 | HC | chr4:7078271-70... 88 3e-18
Medtr2g005240.1 | auxin response factor 2 | HC | chr2:92911-1033... 87 8e-18
Medtr8g027440.1 | auxin response factor 2 | HC | chr8:9733998-97... 86 2e-17
Medtr2g093740.5 | auxin response factor-like protein | HC | chr2... 77 5e-15
Medtr2g093740.4 | auxin response factor-like protein | HC | chr2... 77 5e-15
Medtr2g093740.12 | auxin response factor-like protein | HC | chr... 77 5e-15
Medtr2g093740.11 | auxin response factor-like protein | HC | chr... 77 6e-15
Medtr4g021580.2 | auxin response factor 2 | HC | chr4:7078271-70... 71 4e-13
Medtr7g110790.1 | auxin-responsive AUX/IAA family protein | HC |... 54 6e-08
Medtr1g085750.1 | auxin-responsive AUX/IAA family protein | HC |... 54 8e-08
Medtr4g124300.1 | auxin-responsive AUX/IAA family protein | HC |... 52 2e-07
Medtr2g100780.1 | auxin-responsive AUX/IAA family protein | HC |... 49 2e-06
Medtr2g100780.4 | auxin-responsive AUX/IAA family protein | HC |... 49 2e-06
Medtr2g100780.2 | auxin-responsive AUX/IAA family protein | HC |... 49 2e-06
Medtr1g069495.1 | auxin response factor | HC | chr1:30104004-300... 47 5e-06
Medtr8g014520.1 | auxin response factor | HC | chr8:4572622-4568... 47 6e-06
>Medtr8g101360.1 | auxin response factor 2 | HC |
chr8:42569517-42563540 | 20130731
Length = 1096
Score = 274 bits (701), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 131/158 (82%), Positives = 138/158 (87%), Gaps = 4/158 (2%)
Query: 1 MVSQTFGVPDMTFNSIDSTIDDSSFLNGDPWGXXXXXXXXXXXFQRMRTYTKVYKRGAVG 60
MVSQT+GVPDMTFNSIDSTI+DS FL+ PW FQR+RTYTKVYKRGAVG
Sbjct: 941 MVSQTWGVPDMTFNSIDSTINDSGFLDSGPWAPRPPPHQ----FQRIRTYTKVYKRGAVG 996
Query: 61 RSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEGDVLLVGDDPWEEFVN 120
RSIDI RYSGY+ELK DLARRFGIEGQLEDRQR+GWKLVYVDHE DVLLVGDDPWEEFVN
Sbjct: 997 RSIDITRYSGYDELKHDLARRFGIEGQLEDRQRVGWKLVYVDHENDVLLVGDDPWEEFVN 1056
Query: 121 CVRCIKILSPQEVQQMSLDGDFGSGGLPNQACSSSDGG 158
CVRCIKILSPQEVQQMSLDGDFG+GGLP QA SSSDGG
Sbjct: 1057 CVRCIKILSPQEVQQMSLDGDFGNGGLPRQASSSSDGG 1094
>Medtr4g124900.1 | auxin response factor 2 | HC |
chr4:51795315-51802487 | 20130731
Length = 1120
Score = 194 bits (492), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 101/161 (62%), Positives = 116/161 (72%), Gaps = 13/161 (8%)
Query: 3 SQTFGVPDMTFN---SIDSTIDDSS-FLNGDPWGXXXXXXXXXXXFQRMRTYTKVYKRGA 58
SQ+FG+PDM+F S D I+D+S LN QRMRTYTKV KRG+
Sbjct: 953 SQSFGLPDMSFKPGCSNDVGINDTSGVLNN---------GLRANQNQRMRTYTKVQKRGS 1003
Query: 59 VGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEGDVLLVGDDPWEEF 118
VGR ID+ RY GY+EL+ DLAR FGIEGQLED QR WKLVYVDHE D+LLVGDDPWEEF
Sbjct: 1004 VGRCIDVTRYKGYDELRYDLARMFGIEGQLEDPQRTDWKLVYVDHENDILLVGDDPWEEF 1063
Query: 119 VNCVRCIKILSPQEVQQMSLDGDFGSGGLPNQACSSSDGGN 159
V+CV+ IKILS EVQQMSLDGD G+ +PNQA S +D GN
Sbjct: 1064 VSCVQSIKILSSAEVQQMSLDGDLGNVTIPNQASSGTDSGN 1104
>Medtr4g124900.2 | auxin response factor 2 | HC |
chr4:51795315-51802487 | 20130731
Length = 1097
Score = 193 bits (491), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 101/161 (62%), Positives = 116/161 (72%), Gaps = 13/161 (8%)
Query: 3 SQTFGVPDMTFN---SIDSTIDDSS-FLNGDPWGXXXXXXXXXXXFQRMRTYTKVYKRGA 58
SQ+FG+PDM+F S D I+D+S LN QRMRTYTKV KRG+
Sbjct: 930 SQSFGLPDMSFKPGCSNDVGINDTSGVLNN---------GLRANQNQRMRTYTKVQKRGS 980
Query: 59 VGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEGDVLLVGDDPWEEF 118
VGR ID+ RY GY+EL+ DLAR FGIEGQLED QR WKLVYVDHE D+LLVGDDPWEEF
Sbjct: 981 VGRCIDVTRYKGYDELRYDLARMFGIEGQLEDPQRTDWKLVYVDHENDILLVGDDPWEEF 1040
Query: 119 VNCVRCIKILSPQEVQQMSLDGDFGSGGLPNQACSSSDGGN 159
V+CV+ IKILS EVQQMSLDGD G+ +PNQA S +D GN
Sbjct: 1041 VSCVQSIKILSSAEVQQMSLDGDLGNVTIPNQASSGTDSGN 1081
>Medtr2g043250.2 | auxin response factor 2 | HC |
chr2:18843083-18835022 | 20130731
Length = 1114
Score = 191 bits (485), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 99/162 (61%), Positives = 113/162 (69%), Gaps = 13/162 (8%)
Query: 3 SQTFGVPDMTFN---SIDSTIDDSSFLNGDPWGXXXXXXXXXXXFQRMRTYTKVYKRGAV 59
SQ+FGVP+M+F S + I D+ LN W QRMRTYTKV K G+V
Sbjct: 947 SQSFGVPNMSFKPGCSNEIPIADTGVLNNGLWSNQN---------QRMRTYTKVQKCGSV 997
Query: 60 GRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEGDVLLVGDDPWEEFV 119
GR ID+ RY GYEEL+ DLAR FGIEGQLED R+ WKLVYVDHE D+LLVGDDPWEEFV
Sbjct: 998 GRCIDVTRYKGYEELRNDLARMFGIEGQLEDPVRVDWKLVYVDHENDILLVGDDPWEEFV 1057
Query: 120 NCVRCIKILSPQEVQQMSLDGDFGSG-GLPNQACSSSDGGNT 160
NCV+ IKILS EVQQMSL+GD G + NQACS S+ GN
Sbjct: 1058 NCVQSIKILSSAEVQQMSLEGDLGYNIPITNQACSGSESGNA 1099
>Medtr2g043250.1 | auxin response factor 2 | HC |
chr2:18843526-18835022 | 20130731
Length = 1114
Score = 191 bits (485), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 99/162 (61%), Positives = 113/162 (69%), Gaps = 13/162 (8%)
Query: 3 SQTFGVPDMTFN---SIDSTIDDSSFLNGDPWGXXXXXXXXXXXFQRMRTYTKVYKRGAV 59
SQ+FGVP+M+F S + I D+ LN W QRMRTYTKV K G+V
Sbjct: 947 SQSFGVPNMSFKPGCSNEIPIADTGVLNNGLWSNQN---------QRMRTYTKVQKCGSV 997
Query: 60 GRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEGDVLLVGDDPWEEFV 119
GR ID+ RY GYEEL+ DLAR FGIEGQLED R+ WKLVYVDHE D+LLVGDDPWEEFV
Sbjct: 998 GRCIDVTRYKGYEELRNDLARMFGIEGQLEDPVRVDWKLVYVDHENDILLVGDDPWEEFV 1057
Query: 120 NCVRCIKILSPQEVQQMSLDGDFGSG-GLPNQACSSSDGGNT 160
NCV+ IKILS EVQQMSL+GD G + NQACS S+ GN
Sbjct: 1058 NCVQSIKILSSAEVQQMSLEGDLGYNIPITNQACSGSESGNA 1099
>Medtr8g079492.3 | auxin response factor 2 | HC |
chr8:34083357-34077764 | 20130731
Length = 832
Score = 136 bits (342), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 63/107 (58%), Positives = 78/107 (72%)
Query: 48 RTYTKVYKRGAVGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEGDV 107
+T+ KVYK G+ GRS+DI ++S Y EL+ +LAR FG+EG+LED R GW+LV+VD E DV
Sbjct: 699 KTFVKVYKSGSFGRSLDITKFSNYPELRSELARMFGLEGELEDPVRSGWQLVFVDQENDV 758
Query: 108 LLVGDDPWEEFVNCVRCIKILSPQEVQQMSLDGDFGSGGLPNQACSS 154
LL+GD PW EFVN V CIKILSPQEVQQM +G P Q S+
Sbjct: 759 LLLGDGPWPEFVNSVWCIKILSPQEVQQMGTNGLELLNSAPTQRLSN 805
>Medtr8g079492.1 | auxin response factor 2 | HC |
chr8:34084967-34077764 | 20130731
Length = 914
Score = 135 bits (341), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 63/107 (58%), Positives = 78/107 (72%)
Query: 48 RTYTKVYKRGAVGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEGDV 107
+T+ KVYK G+ GRS+DI ++S Y EL+ +LAR FG+EG+LED R GW+LV+VD E DV
Sbjct: 781 KTFVKVYKSGSFGRSLDITKFSNYPELRSELARMFGLEGELEDPVRSGWQLVFVDQENDV 840
Query: 108 LLVGDDPWEEFVNCVRCIKILSPQEVQQMSLDGDFGSGGLPNQACSS 154
LL+GD PW EFVN V CIKILSPQEVQQM +G P Q S+
Sbjct: 841 LLLGDGPWPEFVNSVWCIKILSPQEVQQMGTNGLELLNSAPTQRLSN 887
>Medtr8g079492.2 | auxin response factor 2 | HC |
chr8:34084030-34077887 | 20130731
Length = 915
Score = 135 bits (341), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 63/107 (58%), Positives = 78/107 (72%)
Query: 48 RTYTKVYKRGAVGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEGDV 107
+T+ KVYK G+ GRS+DI ++S Y EL+ +LAR FG+EG+LED R GW+LV+VD E DV
Sbjct: 782 KTFVKVYKSGSFGRSLDITKFSNYPELRSELARMFGLEGELEDPVRSGWQLVFVDQENDV 841
Query: 108 LLVGDDPWEEFVNCVRCIKILSPQEVQQMSLDGDFGSGGLPNQACSS 154
LL+GD PW EFVN V CIKILSPQEVQQM +G P Q S+
Sbjct: 842 LLLGDGPWPEFVNSVWCIKILSPQEVQQMGTNGLELLNSAPTQRLSN 888
>Medtr1g024025.1 | auxin response factor 2 | LC |
chr1:7778460-7771119 | 20130731
Length = 1265
Score = 133 bits (334), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 70/131 (53%), Positives = 86/131 (65%), Gaps = 12/131 (9%)
Query: 20 IDDSSFL-NGDPWGXXXXXXXXXXXFQRMRTYTKVYKRGAVGRSIDIARYSGYEELKQDL 78
D+SSFL N + W +RTYTKV K G+VGRSID+ + YEEL + +
Sbjct: 734 FDESSFLQNNNSWKQVAAP---------IRTYTKVQKAGSVGRSIDVTTFKNYEELIRAI 784
Query: 79 ARRFGIEGQLEDRQRIGWKLVYVDHEGDVLLVGDDPWEEFVNCVRCIKILSPQEVQQMSL 138
FG++G L D + GWKLVYVD+E DVLLVGDDPWEEFV CVRCI+ILSP EV++MS
Sbjct: 785 ECMFGLDGLLNDTKGSGWKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPSEVKEMSE 844
Query: 139 DGD--FGSGGL 147
+G SG L
Sbjct: 845 EGMKLLNSGAL 855
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 60/103 (58%), Gaps = 21/103 (20%)
Query: 47 MRTYTKVYKRGAVGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEGD 106
+RTYTK+ K G+VGRSID+ + YEEL + + FG++G L D +
Sbjct: 1177 IRTYTKLEKAGSVGRSIDVTTFKNYEELIRAIEYMFGLDGLLNDTK-------------- 1222
Query: 107 VLLVGDDPWEEFVNCVRCIKILSPQEVQQMSLDGD--FGSGGL 147
DDPW+EFV CVR I+ILSP EV++MS +G SG L
Sbjct: 1223 -----DDPWKEFVGCVRRIRILSPSEVKEMSEEGMKLLNSGAL 1260
>Medtr2g018690.1 | auxin response factor 2 | HC |
chr2:5912688-5906356 | 20130731
Length = 908
Score = 132 bits (333), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 63/108 (58%), Positives = 79/108 (73%)
Query: 48 RTYTKVYKRGAVGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEGDV 107
+T+ KVYK G+ GRS+DI ++S Y EL+ +LAR FG+EG+LED R GW+LV+VD E DV
Sbjct: 775 KTFVKVYKSGSFGRSLDITKFSSYNELRSELARMFGLEGELEDPVRSGWQLVFVDRENDV 834
Query: 108 LLVGDDPWEEFVNCVRCIKILSPQEVQQMSLDGDFGSGGLPNQACSSS 155
LL+GD PW EFVN V CIKILSP+EVQQM G +P Q S+S
Sbjct: 835 LLLGDGPWPEFVNSVWCIKILSPEEVQQMGNTGLGLLNSVPIQRLSNS 882
>Medtr3g064050.2 | auxin response factor 2 | HC |
chr3:28803320-28798989 | 20130731
Length = 612
Score = 125 bits (313), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 56/88 (63%), Positives = 73/88 (82%)
Query: 49 TYTKVYKRGAVGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEGDVL 108
T+ KVYK G+VGRS+DI+R+S Y EL+++L + FGIEG+LED R GW+LV+VD E DVL
Sbjct: 487 TFVKVYKSGSVGRSLDISRFSCYRELREELGQMFGIEGKLEDPLRSGWQLVFVDRENDVL 546
Query: 109 LVGDDPWEEFVNCVRCIKILSPQEVQQM 136
L+GDDPWE FVN V IKILSP+++Q+M
Sbjct: 547 LLGDDPWESFVNNVWYIKILSPEDIQKM 574
>Medtr3g064050.1 | auxin response factor 2 | HC |
chr3:28806780-28798989 | 20130731
Length = 849
Score = 124 bits (312), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 56/88 (63%), Positives = 73/88 (82%)
Query: 49 TYTKVYKRGAVGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEGDVL 108
T+ KVYK G+VGRS+DI+R+S Y EL+++L + FGIEG+LED R GW+LV+VD E DVL
Sbjct: 724 TFVKVYKSGSVGRSLDISRFSCYRELREELGQMFGIEGKLEDPLRSGWQLVFVDRENDVL 783
Query: 109 LVGDDPWEEFVNCVRCIKILSPQEVQQM 136
L+GDDPWE FVN V IKILSP+++Q+M
Sbjct: 784 LLGDDPWESFVNNVWYIKILSPEDIQKM 811
>Medtr5g076270.1 | auxin response factor 2 | HC |
chr5:32499847-32489763 | 20130731
Length = 841
Score = 124 bits (310), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 54/87 (62%), Positives = 72/87 (82%)
Query: 50 YTKVYKRGAVGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEGDVLL 109
+ KVYK G+VGRS+DI+R++ Y EL+++LA+ FGIEG+ ED R GW+LV+VD E DVLL
Sbjct: 717 FVKVYKSGSVGRSLDISRFNSYHELREELAQMFGIEGKFEDPLRSGWQLVFVDRENDVLL 776
Query: 110 VGDDPWEEFVNCVRCIKILSPQEVQQM 136
+GDDPWE FVN V IKILSP+++Q+M
Sbjct: 777 LGDDPWESFVNNVWYIKILSPEDIQKM 803
>Medtr4g060460.1 | auxin response factor-like protein | HC |
chr4:22234433-22239989 | 20130731
Length = 792
Score = 94.4 bits (233), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 67/92 (72%), Gaps = 2/92 (2%)
Query: 48 RTYTKVYKRGA-VGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEGD 106
R+ TKV+K+G+ VGR+ID++R SGY +L +L + FG+EG L D + GW+++Y D E D
Sbjct: 663 RSCTKVHKQGSLVGRAIDLSRLSGYNDLLSELEKLFGMEGLLRDSDK-GWRILYTDSEND 721
Query: 107 VLLVGDDPWEEFVNCVRCIKILSPQEVQQMSL 138
+++VGDDPW EF + V I I + +EV++M+
Sbjct: 722 IMVVGDDPWHEFCDVVSKIHIYTKEEVEKMTF 753
>Medtr4g060460.2 | auxin response factor-like protein | HC |
chr4:22234433-22239989 | 20130731
Length = 787
Score = 94.0 bits (232), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 67/92 (72%), Gaps = 2/92 (2%)
Query: 48 RTYTKVYKRGA-VGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEGD 106
R+ TKV+K+G+ VGR+ID++R SGY +L +L + FG+EG L D + GW+++Y D E D
Sbjct: 658 RSCTKVHKQGSLVGRAIDLSRLSGYNDLLSELEKLFGMEGLLRDSDK-GWRILYTDSEND 716
Query: 107 VLLVGDDPWEEFVNCVRCIKILSPQEVQQMSL 138
+++VGDDPW EF + V I I + +EV++M+
Sbjct: 717 IMVVGDDPWHEFCDVVSKIHIYTKEEVEKMTF 748
>Medtr2g093740.7 | auxin response factor-like protein | HC |
chr2:39983867-39979955 | 20130731
Length = 680
Score = 94.0 bits (232), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 72/106 (67%), Gaps = 6/106 (5%)
Query: 48 RTYTKVYKRGA-VGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEGD 106
R+ TKV+K+G+ VGR+ID++R S Y +L +L R FG+EG L D + GW+++Y D E D
Sbjct: 552 RSCTKVHKQGSLVGRAIDLSRLSSYNDLVSELERLFGMEGLLRDPDK-GWRILYTDSEND 610
Query: 107 VLLVGDDPWEEFVNCVRCIKILSPQEVQQMSLDGDFGSGGLPNQAC 152
+++VGDDPW EF + V I I + +EV++M++ G NQ+C
Sbjct: 611 IMVVGDDPWHEFCDMVSKIHIYTQEEVEKMTI----GMMNDDNQSC 652
>Medtr2g093740.8 | auxin response factor-like protein | HC |
chr2:39983867-39979955 | 20130731
Length = 693
Score = 93.6 bits (231), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 72/106 (67%), Gaps = 6/106 (5%)
Query: 48 RTYTKVYKRGA-VGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEGD 106
R+ TKV+K+G+ VGR+ID++R S Y +L +L R FG+EG L D + GW+++Y D E D
Sbjct: 565 RSCTKVHKQGSLVGRAIDLSRLSSYNDLVSELERLFGMEGLLRDPDK-GWRILYTDSEND 623
Query: 107 VLLVGDDPWEEFVNCVRCIKILSPQEVQQMSLDGDFGSGGLPNQAC 152
+++VGDDPW EF + V I I + +EV++M++ G NQ+C
Sbjct: 624 IMVVGDDPWHEFCDMVSKIHIYTQEEVEKMTI----GMMNDDNQSC 665
>Medtr2g093740.1 | auxin response factor-like protein | HC |
chr2:39984806-39979874 | 20130731
Length = 810
Score = 93.6 bits (231), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 72/106 (67%), Gaps = 6/106 (5%)
Query: 48 RTYTKVYKRGA-VGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEGD 106
R+ TKV+K+G+ VGR+ID++R S Y +L +L R FG+EG L D + GW+++Y D E D
Sbjct: 682 RSCTKVHKQGSLVGRAIDLSRLSSYNDLVSELERLFGMEGLLRDPDK-GWRILYTDSEND 740
Query: 107 VLLVGDDPWEEFVNCVRCIKILSPQEVQQMSLDGDFGSGGLPNQAC 152
+++VGDDPW EF + V I I + +EV++M++ G NQ+C
Sbjct: 741 IMVVGDDPWHEFCDMVSKIHIYTQEEVEKMTI----GMMNDDNQSC 782
>Medtr2g093740.2 | auxin response factor-like protein | HC |
chr2:39984806-39979874 | 20130731
Length = 823
Score = 93.2 bits (230), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 72/106 (67%), Gaps = 6/106 (5%)
Query: 48 RTYTKVYKRGA-VGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEGD 106
R+ TKV+K+G+ VGR+ID++R S Y +L +L R FG+EG L D + GW+++Y D E D
Sbjct: 695 RSCTKVHKQGSLVGRAIDLSRLSSYNDLVSELERLFGMEGLLRDPDK-GWRILYTDSEND 753
Query: 107 VLLVGDDPWEEFVNCVRCIKILSPQEVQQMSLDGDFGSGGLPNQAC 152
+++VGDDPW EF + V I I + +EV++M++ G NQ+C
Sbjct: 754 IMVVGDDPWHEFCDMVSKIHIYTQEEVEKMTI----GMMNDDNQSC 795
>Medtr8g100050.1 | auxin response factor 2 | HC |
chr8:40230869-40235830 | 20130731
Length = 833
Score = 92.8 bits (229), Expect = 1e-19, Method: Composition-based stats.
Identities = 50/113 (44%), Positives = 76/113 (67%), Gaps = 5/113 (4%)
Query: 48 RTYTKVYKRG-AVGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEGD 106
R+ TKV+K+G A+GRS+D+ ++S Y+EL +L + F G+L Q+ W +V+ D+EGD
Sbjct: 710 RSCTKVHKKGIALGRSVDLTKFSDYDELTAELDQLFEFRGELISPQK-DWLVVFTDNEGD 768
Query: 107 VLLVGDDPWEEFVNCVRCIKILSPQEVQQMSLDGDFGSGGLPNQACSSSDGGN 159
++LVGDDPW+EF + VR I I +E+Q+MS G S N S++DGG+
Sbjct: 769 MMLVGDDPWQEFCSMVRKIYIYPKEEIQKMS-PGTLSSKNEENH--SATDGGD 818
>Medtr7g062540.1 | auxin response factor 2 | HC |
chr7:22756278-22761697 | 20130731
Length = 680
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 64/91 (70%), Gaps = 3/91 (3%)
Query: 48 RTYTKVYKRG-AVGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEGD 106
R+ TKV +G AVGR++D+ GY++L +L + F I+GQ++ R + W++V+ D EGD
Sbjct: 570 RSCTKVQMQGVAVGRAVDLTALDGYDQLIDELEKLFDIKGQIQPRNK--WEIVFTDDEGD 627
Query: 107 VLLVGDDPWEEFVNCVRCIKILSPQEVQQMS 137
++LVGDDPW EF N VR I I S Q+V +MS
Sbjct: 628 MMLVGDDPWPEFCNMVRRIFICSSQDVHKMS 658
>Medtr4g021580.1 | auxin response factor 2 | HC |
chr4:7078271-7072794 | 20130731
Length = 667
Score = 87.8 bits (216), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 64/90 (71%), Gaps = 3/90 (3%)
Query: 48 RTYTKVYKRG-AVGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEGD 106
R+ TKV +G AVGR++D+A +GY++L +L F I+GQL+ R W++V+ D EGD
Sbjct: 555 RSRTKVQMQGVAVGRAVDLATLNGYDQLIGELEELFDIKGQLQHRN--TWEIVFTDDEGD 612
Query: 107 VLLVGDDPWEEFVNCVRCIKILSPQEVQQM 136
++LVGDDPW EF N VR I I S Q+V++M
Sbjct: 613 MMLVGDDPWPEFCNMVRRIFICSSQDVKKM 642
>Medtr2g005240.1 | auxin response factor 2 | HC | chr2:92911-103331
| 20130731
Length = 671
Score = 86.7 bits (213), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 68/94 (72%), Gaps = 2/94 (2%)
Query: 45 QRMRTYTKVYKRG-AVGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDH 103
+++R+ TKV+ +G AVGR++D+ R+ GYE+L + L F IEG+L + W +VY D+
Sbjct: 544 RQIRSCTKVHMQGMAVGRAVDLTRFDGYEDLLRKLEEMFDIEGELCGATK-KWLVVYTDN 602
Query: 104 EGDVLLVGDDPWEEFVNCVRCIKILSPQEVQQMS 137
E D+++VGDDPW EF + VR + I +P+EV+++S
Sbjct: 603 EDDMMMVGDDPWLEFCSVVRKMFIYTPEEVKKLS 636
>Medtr8g027440.1 | auxin response factor 2 | HC |
chr8:9733998-9728759 | 20130731
Length = 677
Score = 85.5 bits (210), Expect = 2e-17, Method: Composition-based stats.
Identities = 41/91 (45%), Positives = 63/91 (69%), Gaps = 3/91 (3%)
Query: 47 MRTYTKVYKRG-AVGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEG 105
MRT TKV G AVGR++D+ SGY+EL ++ + F I+G+L + + W++ + D+E
Sbjct: 557 MRTRTKVQMEGVAVGRALDLTMLSGYDELIDEVEKLFDIKGELRSQNK--WRVTFTDNEN 614
Query: 106 DVLLVGDDPWEEFVNCVRCIKILSPQEVQQM 136
D++LVGDDPW EF N V+ I I S +E+++M
Sbjct: 615 DMMLVGDDPWPEFCNMVKKIFICSNEELKKM 645
>Medtr2g093740.5 | auxin response factor-like protein | HC |
chr2:39984806-39979874 | 20130731
Length = 750
Score = 77.4 bits (189), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 53/70 (75%), Gaps = 2/70 (2%)
Query: 48 RTYTKVYKRGA-VGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEGD 106
R+ TKV+K+G+ VGR+ID++R S Y +L +L R FG+EG L D + GW+++Y D E D
Sbjct: 682 RSCTKVHKQGSLVGRAIDLSRLSSYNDLVSELERLFGMEGLLRDPDK-GWRILYTDSEND 740
Query: 107 VLLVGDDPWE 116
+++VGDDPW+
Sbjct: 741 IMVVGDDPWQ 750
>Medtr2g093740.4 | auxin response factor-like protein | HC |
chr2:39984806-39979874 | 20130731
Length = 763
Score = 77.4 bits (189), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 53/70 (75%), Gaps = 2/70 (2%)
Query: 48 RTYTKVYKRGA-VGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEGD 106
R+ TKV+K+G+ VGR+ID++R S Y +L +L R FG+EG L D + GW+++Y D E D
Sbjct: 695 RSCTKVHKQGSLVGRAIDLSRLSSYNDLVSELERLFGMEGLLRDPDK-GWRILYTDSEND 753
Query: 107 VLLVGDDPWE 116
+++VGDDPW+
Sbjct: 754 IMVVGDDPWQ 763
>Medtr2g093740.12 | auxin response factor-like protein | HC |
chr2:39983867-39979955 | 20130731
Length = 620
Score = 77.4 bits (189), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 53/70 (75%), Gaps = 2/70 (2%)
Query: 48 RTYTKVYKRGA-VGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEGD 106
R+ TKV+K+G+ VGR+ID++R S Y +L +L R FG+EG L D + GW+++Y D E D
Sbjct: 552 RSCTKVHKQGSLVGRAIDLSRLSSYNDLVSELERLFGMEGLLRDPDK-GWRILYTDSEND 610
Query: 107 VLLVGDDPWE 116
+++VGDDPW+
Sbjct: 611 IMVVGDDPWQ 620
>Medtr2g093740.11 | auxin response factor-like protein | HC |
chr2:39983938-39979955 | 20130731
Length = 633
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 53/70 (75%), Gaps = 2/70 (2%)
Query: 48 RTYTKVYKRGA-VGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEGD 106
R+ TKV+K+G+ VGR+ID++R S Y +L +L R FG+EG L D + GW+++Y D E D
Sbjct: 565 RSCTKVHKQGSLVGRAIDLSRLSSYNDLVSELERLFGMEGLLRDPDK-GWRILYTDSEND 623
Query: 107 VLLVGDDPWE 116
+++VGDDPW+
Sbjct: 624 IMVVGDDPWQ 633
>Medtr4g021580.2 | auxin response factor 2 | HC |
chr4:7078271-7072794 | 20130731
Length = 622
Score = 71.2 bits (173), Expect = 4e-13, Method: Composition-based stats.
Identities = 34/69 (49%), Positives = 50/69 (72%), Gaps = 3/69 (4%)
Query: 48 RTYTKVYKRG-AVGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEGD 106
R+ TKV +G AVGR++D+A +GY++L +L F I+GQL+ R W++V+ D EGD
Sbjct: 555 RSRTKVQMQGVAVGRAVDLATLNGYDQLIGELEELFDIKGQLQHRNT--WEIVFTDDEGD 612
Query: 107 VLLVGDDPW 115
++LVGDDPW
Sbjct: 613 MMLVGDDPW 621
>Medtr7g110790.1 | auxin-responsive AUX/IAA family protein | HC |
chr7:45409781-45408778 | 20130731
Length = 161
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 12/87 (13%)
Query: 50 YTKVYKRG-AVGRSIDIARYSGYEELKQDLARRFG--------IEGQLEDRQRIGWKLVY 100
Y KVY G +GR ++I + Y EL + L F ++G +R + L Y
Sbjct: 70 YVKVYMEGIPIGRKLNILAHQSYHELVKTLEHMFDTTILWGNEMDGVQPERCHV---LTY 126
Query: 101 VDHEGDVLLVGDDPWEEFVNCVRCIKI 127
D EGD+++VGD PWE F++ V+ +KI
Sbjct: 127 EDEEGDLVMVGDVPWEMFLSTVKRLKI 153
>Medtr1g085750.1 | auxin-responsive AUX/IAA family protein | HC |
chr1:38333347-38334717 | 20130731
Length = 176
Score = 53.5 bits (127), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 12/87 (13%)
Query: 50 YTKVYKRG-AVGRSIDIARYSGYEELKQDLARRFG--------IEGQLEDRQRIGWKLVY 100
+ KVY G +GR +++ ++GY EL L + F ++G +R + L Y
Sbjct: 85 FVKVYMEGIPIGRKLNLLAHNGYHELVNTLEQMFDTTILWGTEMDGVQSERCHV---LTY 141
Query: 101 VDHEGDVLLVGDDPWEEFVNCVRCIKI 127
D EGD+++VGD PWE F++ V+ +KI
Sbjct: 142 EDGEGDLIMVGDVPWEMFLSSVKRLKI 168
>Medtr4g124300.1 | auxin-responsive AUX/IAA family protein | HC |
chr4:51327848-51326632 | 20130731
Length = 184
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 45 QRMRTYTKVYKRG-AVGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIG-WK---LV 99
QR + KVY G +GR +++ + Y+ L + L F + Q + W L
Sbjct: 91 QRPSLFVKVYMEGIPIGRKLNLLEHHSYDGLIKALCHMFRTTILCPNSQPLNSWNFHVLT 150
Query: 100 YVDHEGDVLLVGDDPWEEFVNCVRCIKI 127
Y D EGD ++VGD PWE F++ V+ +KI
Sbjct: 151 YEDQEGDWMMVGDVPWEMFLSSVKRLKI 178
>Medtr2g100780.1 | auxin-responsive AUX/IAA family protein | HC |
chr2:43340473-43336605 | 20130731
Length = 269
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 22/102 (21%)
Query: 59 VGRSIDIARYSGYEELKQ---DLARRF----------GIEGQLEDRQRI---------GW 96
+GR +D+ Y Y+ L DL R G + E+ +++ +
Sbjct: 159 IGRKVDLNAYHSYDNLSSAVDDLFRGLLKAQRDSSACGGNNKKEEEEKVITGLLDGSGEY 218
Query: 97 KLVYVDHEGDVLLVGDDPWEEFVNCVRCIKILSPQEVQQMSL 138
LVY D+EGD +LVGD PW FV+ V+ +++L E+ +L
Sbjct: 219 TLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSTELSAFTL 260
>Medtr2g100780.4 | auxin-responsive AUX/IAA family protein | HC |
chr2:43340807-43336605 | 20130731
Length = 269
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 22/102 (21%)
Query: 59 VGRSIDIARYSGYEELKQ---DLARRF----------GIEGQLEDRQRI---------GW 96
+GR +D+ Y Y+ L DL R G + E+ +++ +
Sbjct: 159 IGRKVDLNAYHSYDNLSSAVDDLFRGLLKAQRDSSACGGNNKKEEEEKVITGLLDGSGEY 218
Query: 97 KLVYVDHEGDVLLVGDDPWEEFVNCVRCIKILSPQEVQQMSL 138
LVY D+EGD +LVGD PW FV+ V+ +++L E+ +L
Sbjct: 219 TLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSTELSAFTL 260
>Medtr2g100780.2 | auxin-responsive AUX/IAA family protein | HC |
chr2:43340473-43336605 | 20130731
Length = 269
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 22/102 (21%)
Query: 59 VGRSIDIARYSGYEELKQ---DLARRF----------GIEGQLEDRQRI---------GW 96
+GR +D+ Y Y+ L DL R G + E+ +++ +
Sbjct: 159 IGRKVDLNAYHSYDNLSSAVDDLFRGLLKAQRDSSACGGNNKKEEEEKVITGLLDGSGEY 218
Query: 97 KLVYVDHEGDVLLVGDDPWEEFVNCVRCIKILSPQEVQQMSL 138
LVY D+EGD +LVGD PW FV+ V+ +++L E+ +L
Sbjct: 219 TLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSTELSAFTL 260
>Medtr1g069495.1 | auxin response factor | HC |
chr1:30104004-30099851 | 20130731
Length = 272
Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 51/115 (44%), Gaps = 23/115 (20%)
Query: 46 RMRTYTKVYKRG-AVGRSIDIARYSGYEELKQDLARRF----------GIEGQLEDRQRI 94
R + KV G +GR +D++ +S YE L Q L F G G+ +
Sbjct: 143 RKSPFVKVNMDGIPIGRKVDLSAHSSYETLAQTLEDMFDESTTSVTSKGSNGEDHNMTTR 202
Query: 95 GWK------------LVYVDHEGDVLLVGDDPWEEFVNCVRCIKILSPQEVQQMS 137
G + L Y D EGD +LVGD PW F++ VR ++I+ E ++
Sbjct: 203 GERHSILLDGSSKFVLTYEDKEGDWMLVGDVPWGMFLSSVRRLRIMRTSEANGLA 257
>Medtr8g014520.1 | auxin response factor | HC | chr8:4572622-4568904
| 20130731
Length = 271
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 45/90 (50%), Gaps = 22/90 (24%)
Query: 59 VGRSIDIARYSGYEELKQ---DLAR--------RFGIEGQLEDRQRIGWK---------- 97
+GR IDI Y YE+L DL R GI + E+ + G K
Sbjct: 167 IGRKIDINAYDSYEKLSSAVDDLFRGLLEEINLSHGINKKQEE-EDTGMKGSLTGSGEYT 225
Query: 98 LVYVDHEGDVLLVGDDPWEEFVNCVRCIKI 127
LVY D+EGD +LVGD PW FV+ V+ +++
Sbjct: 226 LVYEDNEGDKMLVGDVPWHMFVSTVKRLRV 255