Miyakogusa Predicted Gene
- Lj5g3v0176630.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v0176630.1 Non Characterized Hit- tr|G7I760|G7I760_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,79.06,0,seg,NULL; ZINC_FINGER_C2H2_1,Zinc finger, C2H2;
ADP-ribosylation,NULL; SUBFAMILY NOT NAMED,NULL; FAM,CUFF.52623.1
(297 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g024980.1 | C2H2-like zinc finger protein | HC | chr1:7957... 394 e-110
Medtr3g072920.1 | nucleic acid-binding protein | HC | chr3:32823... 237 1e-62
Medtr4g081420.1 | C2H2-like zinc finger protein | HC | chr4:3157... 148 5e-36
Medtr3g463270.1 | C2H2-like zinc finger protein | HC | chr3:2532... 137 9e-33
Medtr2g010870.1 | C2H2-like zinc finger protein | HC | chr2:2562... 110 1e-24
Medtr2g010860.1 | C2H2-like zinc finger protein | HC | chr2:2551... 108 6e-24
Medtr5g012220.1 | zinc finger (C2H2 type) family protein, putati... 86 6e-17
Medtr4g101450.1 | zinc finger (C2H2 type) family protein, putati... 85 1e-16
Medtr5g094440.1 | nucleic acid-binding protein | HC | chr5:41275... 84 1e-16
>Medtr1g024980.1 | C2H2-like zinc finger protein | HC |
chr1:7957883-7961646 | 20130731
Length = 403
Score = 394 bits (1013), Expect = e-110, Method: Compositional matrix adjust.
Identities = 201/274 (73%), Positives = 217/274 (79%), Gaps = 6/274 (2%)
Query: 26 DQIKNLISCKQIEGSRVIDPSKGHXXXXXXXXXXXXXX---FKDVVHGNTRVVHRSDNSS 82
DQIKNL++CKQIE SRV DPSK + F+DVVHGNTRVVHRSDNSS
Sbjct: 39 DQIKNLLTCKQIEVSRVHDPSKPNNNNGYSKLGSSCSSICSFRDVVHGNTRVVHRSDNSS 98
Query: 83 PESSTLGQETGLLSRKPAPHHSTSGSA--GKSNCXXXXXXXXXXXXXMQFRKLSGCYECH 140
PESS LGQET LL RKP ST ++ GKS+ MQFRKLSGCYECH
Sbjct: 99 PESSILGQETSLLKRKPVNASSTRSASCSGKSSNGGGNYTSSSSSRGMQFRKLSGCYECH 158
Query: 141 MIIDPSRQPMPRSTICVCSQCGEVFPKMESLELHQAVRHAVSELGPEDSGRNIVEIIFKS 200
MI+DPSR P+PRST+C C QCGEVFPK+ESLELHQAVRHAVSELGPEDSGRNIVEIIFKS
Sbjct: 159 MIVDPSRLPIPRSTLCRCDQCGEVFPKIESLELHQAVRHAVSELGPEDSGRNIVEIIFKS 218
Query: 201 SWLKRDTPMCKIERILKVHNTQRTIQRFEECRDAVKSRAVSSTKKNPRCAADGNELLRFH 260
SWLKR+TPMCKIERILKVHNTQRTIQRFEECRDAVKSRA ++TKKNPRCAADGNELLRFH
Sbjct: 219 SWLKRETPMCKIERILKVHNTQRTIQRFEECRDAVKSRASNTTKKNPRCAADGNELLRFH 278
Query: 261 CTALTCALGERGSSALCSAGPSCGVCTIIRHGFQ 294
T+L+CALG GSS LC A P CGVC IIRHGFQ
Sbjct: 279 STSLSCALGASGSSTLC-AVPGCGVCNIIRHGFQ 311
>Medtr3g072920.1 | nucleic acid-binding protein | HC |
chr3:32823995-32821730 | 20130731
Length = 452
Score = 237 bits (605), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 109/171 (63%), Positives = 136/171 (79%), Gaps = 5/171 (2%)
Query: 128 MQFRKLSGCYECHMIIDP----SRQPMPRSTICVCSQCGEVFPKMESLELHQAVRHAVSE 183
MQFR+LSGCYEC M++DP +R RS+IC C CGE+ K ESLELHQAV+HAVSE
Sbjct: 185 MQFRRLSGCYECRMVVDPVLGFTRDSSLRSSICSCPDCGEIM-KTESLELHQAVKHAVSE 243
Query: 184 LGPEDSGRNIVEIIFKSSWLKRDTPMCKIERILKVHNTQRTIQRFEECRDAVKSRAVSST 243
LGPED+ +NIVEIIF SSWLK+ +P+CKI+RILKV NTQ+TI +FEE RD++K++A + +
Sbjct: 244 LGPEDTSKNIVEIIFHSSWLKKQSPVCKIDRILKVQNTQKTITKFEEYRDSIKAKATNLS 303
Query: 244 KKNPRCAADGNELLRFHCTALTCALGERGSSALCSAGPSCGVCTIIRHGFQ 294
KK+PRC ADGNELLRFHCT C+LG GSS LC++ C VC II+HGF+
Sbjct: 304 KKHPRCIADGNELLRFHCTTFVCSLGLNGSSNLCNSTSQCNVCGIIKHGFK 354
>Medtr4g081420.1 | C2H2-like zinc finger protein | HC |
chr4:31572240-31574750 | 20130731
Length = 437
Score = 148 bits (374), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 77/145 (53%), Positives = 96/145 (66%), Gaps = 1/145 (0%)
Query: 153 STICVCSQCGEVFPKMESLELHQAVRHAVSELGPEDSGRNIVEIIFKSSWLKRDTPMCKI 212
S+ C +CGE F K E+ E H +HAV+EL DS R IVEII ++SWLK + +I
Sbjct: 200 SSTVTCHKCGEQFNKWEAAEAHHLSKHAVTELVEGDSSRKIVEIICRTSWLKSENHCGRI 259
Query: 213 ERILKVHNTQRTIQRFEECRDAVKSRAVSSTKKNPRCAADGNELLRFHCTALTCALGERG 272
ER+LKVHN Q+T+ RFEE R+ VK +A KK+PRC ADGNELLRF+ T + C+LG G
Sbjct: 260 ERVLKVHNMQKTLARFEEYREMVKIKASKLQKKHPRCLADGNELLRFYGTTVACSLGLNG 319
Query: 273 SSALCSAGPSCGVCTIIRHGFQGGK 297
SS+LC C VC IIR GF K
Sbjct: 320 SSSLC-LSEKCCVCRIIRSGFSAKK 343
>Medtr3g463270.1 | C2H2-like zinc finger protein | HC |
chr3:25329997-25332232 | 20130731
Length = 389
Score = 137 bits (346), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 69/144 (47%), Positives = 93/144 (64%), Gaps = 4/144 (2%)
Query: 152 RSTICVCSQCGEVFPKMESLELHQAVRHAVSELGPEDSGRNIVEIIFKSSWLKRDTPMCK 211
R+ I C+ CGE+F K LE HQ+ HAVSEL D G NIV+IIFKS W + +T
Sbjct: 148 RNDIFPCTACGEIFQKPNLLENHQSANHAVSELIGSDPGHNIVQIIFKSGWPETNT-FPN 206
Query: 212 IERILKVHNTQRTIQRFEECRDAVKSRAVSST--KKNPRCAADGNELLRFHCTALTCALG 269
I RI+K+HN+Q+ + +FEE R+ VK +A +++ RC ADGNEL+RFHC+ C LG
Sbjct: 207 IHRIMKIHNSQKILSKFEEYRETVKIKAARGVTRRRDERCIADGNELMRFHCSTFLCELG 266
Query: 270 ERGSSALCSAGPSCGVCTIIRHGF 293
G S++CS C +C II+ GF
Sbjct: 267 HNGDSSICSQ-QFCNICGIIKSGF 289
>Medtr2g010870.1 | C2H2-like zinc finger protein | HC |
chr2:2562022-2566589 | 20130731
Length = 368
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/140 (44%), Positives = 83/140 (59%), Gaps = 2/140 (1%)
Query: 154 TICVCSQCGEVFPKMESLELHQAVRHAVSELGPEDSGRNIVEIIFKSSWLKRDTPMCKIE 213
+I +C +CGE + ++E H H+V+EL EDS R IV II + + + +I+
Sbjct: 112 SILICYKCGEKLKNLTAVEAHHITEHSVTEL-EEDSSRQIVGIICGNGTNLVSSELRQID 170
Query: 214 RILKVHNTQRTIQRFEECRDAVKSRAVSSTKKNPRCAADGNELLRFHCTALTCALGERGS 273
ILKVHN +T+ FEE R+ VK A +PRC ADGNELL FH T + C+LG S
Sbjct: 171 CILKVHNMPKTLACFEEYREIVKINANKLHVNHPRCLADGNELLMFHGTNIACSLGINNS 230
Query: 274 SALCSAGPSCGVCTIIRHGF 293
+LC CGVC I+RHGF
Sbjct: 231 FSLCDL-DYCGVCQILRHGF 249
>Medtr2g010860.1 | C2H2-like zinc finger protein | HC |
chr2:2551625-2553304 | 20130731
Length = 378
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 65/146 (44%), Positives = 84/146 (57%), Gaps = 4/146 (2%)
Query: 154 TICVCSQCGEVFPKMESLELHQAVRH-AVSELGPEDSGRNIVEIIFKSSWLKRDTPMCKI 212
+I +C +CGE + +E H H +V+EL E S R IVE I +S + + +I
Sbjct: 141 SILICHKCGEKLKNLNDVETHHITEHYSVTEL-EETSSRKIVETICESGTSFISSELWQI 199
Query: 213 ERILKVHNTQRTIQRFEECRDAVKSRAVSSTKKN-PRCAADGNELLRFHCTALTCALGER 271
+ ILKVHN +T Q FEE R+ VK A KN RC DGNELL FH T + C+LG
Sbjct: 200 DCILKVHNMPKTFQCFEEYREMVKINANKLQIKNHARCLVDGNELLMFHGTNIACSLGIN 259
Query: 272 GSSALCSAGPSCGVCTIIRHGFQGGK 297
GS +LC+ CGVC I+RHGF K
Sbjct: 260 GSYSLCTL-DYCGVCQILRHGFSTNK 284
>Medtr5g012220.1 | zinc finger (C2H2 type) family protein, putative
| HC | chr5:3627133-3625775 | 20130731
Length = 290
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 66/119 (55%), Gaps = 4/119 (3%)
Query: 180 AVSELGPEDSGRNIVEIIFKSSWLKRDTPMC-KIERILKVHNTQRTIQRFEECRDAVKSR 238
+++EL RN+VEIIF +SW + P ++E I KVHN RT+ RFEE R+ VK+R
Sbjct: 105 SLTELNEGHPSRNVVEIIFHTSWGPK--PFSGRVEMIFKVHNGSRTVTRFEEYRETVKTR 162
Query: 239 AVSST-KKNPRCAADGNELLRFHCTALTCALGERGSSALCSAGPSCGVCTIIRHGFQGG 296
S ++N RC ADGNE++RFHC T G G + + S G I GG
Sbjct: 163 PGSRNHEENARCVADGNEVMRFHCLGPTSGGGPYGGACVGSFPGGKGTAAICTFSGSGG 221
>Medtr4g101450.1 | zinc finger (C2H2 type) family protein, putative
| HC | chr4:41957218-41958219 | 20130731
Length = 275
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 65/106 (61%), Gaps = 12/106 (11%)
Query: 191 RNIVEIIFKSSWLKRDTPMCKIERILKVHNTQRTIQRFEECRDAVKSRA---VSSTKKNP 247
RN+V+IIF +SW + P ++E I KV N RT+ RFEE R+AVK+RA VS +++N
Sbjct: 106 RNVVDIIFHTSWGNNEFP-GRVEMIFKVQNGARTMSRFEEFREAVKTRAASSVSDSEENA 164
Query: 248 RCAADGNELLRFHCTAL--------TCALGERGSSALCSAGPSCGV 285
RC ADGNE+++FHC + + ER +A+C+ S G
Sbjct: 165 RCVADGNEVMQFHCLGPAEDGGPHGSWSFPERKGAAICTFSGSGGA 210
>Medtr5g094440.1 | nucleic acid-binding protein | HC |
chr5:41275804-41277174 | 20130731
Length = 270
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 65/115 (56%), Gaps = 7/115 (6%)
Query: 183 ELGPEDSGRNIVEIIFKSSWLKRDTPMCKIERILKVHNTQRTIQRFEECRDAVKSRAVSS 242
ELG D R IVE+IF+ +W+ P+ K+ +L+V ++ ++RFE+ R+ VK +
Sbjct: 74 ELGIGDPSRKIVEMIFQKAWMNTSKPLRKVRTVLRVRYSEEVLERFEKYREKVKEQY--- 130
Query: 243 TKKNPRCAADGNELLRFHCTALTCALGE--RGSSALCSAGPSCGVCTIIRHGFQG 295
++PR DGNELLRF+ T + C G+ + LC PSC C +I+ F
Sbjct: 131 -PRHPRSTVDGNELLRFYVTTMRCFQGKPMKKVHDLCK-DPSCRFCQVIQFNFDA 183