Miyakogusa Predicted Gene

Lj5g3v0175610.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0175610.1 tr|A7S166|A7S166_NEMVE Predicted protein
(Fragment) OS=Nematostella vectensis GN=v1g100491 PE=4
SV=1,35.71,0.00006,DnaJ/Hsp40 cysteine-rich domain,Heat shock protein
DnaJ, cysteine-rich domain; seg,NULL; no descript,CUFF.52621.1
         (156 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g024840.1 | protein disulfide-isomerase LQY1 | HC | chr1:7...   249   8e-67

>Medtr1g024840.1 | protein disulfide-isomerase LQY1 | HC |
           chr1:7926622-7924436 | 20130731
          Length = 157

 Score =  249 bits (636), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 121/138 (87%), Positives = 127/138 (92%), Gaps = 1/138 (0%)

Query: 20  PLKQ-PFSPSSRNRIQPKPTSYPRIRALEFDQNTVIAITVGVASVAIGIGIPVFYESQID 78
           PLK    +P +RN+ QPKPT YPRIRALE DQNTV+AITVGV SVA+GIGIPVFYESQID
Sbjct: 20  PLKSLSTTPLARNKFQPKPTFYPRIRALELDQNTVVAITVGVLSVAVGIGIPVFYESQID 79

Query: 79  NAAKRDNTQPCFPCSGSGAQKCRFCLGTGNVTVELGGDEKEVSRCINCDGAGSLTCTTCQ 138
           NAAKRDNTQPCFPC+GSGAQKCRFCLGTGNVTVELGG E EVSRCINCDGAGSLTCTTCQ
Sbjct: 80  NAAKRDNTQPCFPCNGSGAQKCRFCLGTGNVTVELGGAETEVSRCINCDGAGSLTCTTCQ 139

Query: 139 GSGIQPRYLDRREFKDDD 156
           GSGIQPRYLDRREFKDDD
Sbjct: 140 GSGIQPRYLDRREFKDDD 157