Miyakogusa Predicted Gene

Lj5g3v0144410.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0144410.1 tr|G7I5V4|G7I5V4_MEDTR GTPase obg OS=Medicago
truncatula GN=MTR_1g023160 PE=4 SV=1,66.2,0,P-loop containing
nucleoside triphosphate hydrolases,NULL; Obg GTP-binding protein
N-terminal domain,gene.g58442.t1.1
         (425 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g023160.1 | GTP-binding protein Obg2, putative | HC | chr1...   602   e-172
Medtr2g019790.1 | Obg family GTPase CgtA | HC | chr2:6528744-652...   163   3e-40
Medtr2g019790.2 | Obg family GTPase CgtA | HC | chr2:6528707-652...   163   3e-40
Medtr1g073010.1 | Obg family GTPase CgtA | HC | chr1:32424577-32...   108   1e-23
Medtr2g030370.1 | GTP-binding protein | HC | chr2:11409528-11417...    63   5e-10
Medtr3g094880.1 | developmentally regulated GTP-binding protein ...    59   9e-09
Medtr2g030335.1 | 50S ribosome-binding GTPase | LC | chr2:113929...    54   3e-07

>Medtr1g023160.1 | GTP-binding protein Obg2, putative | HC |
           chr1:7356764-7361982 | 20130731
          Length = 496

 Score =  602 bits (1551), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 310/456 (67%), Positives = 350/456 (76%), Gaps = 42/456 (9%)

Query: 9   IEFPNPKCKTVVVECRVTSAN-NASPPSTALAKEPHKYFDHAVITVRGGDGGHGAVLNQ- 66
            +F   K KT+  +CR+ + N    PPS AL KEPHK+FD  +ITVRGGDGGHGA+LNQ 
Sbjct: 35  FKFQQHKRKTI--QCRIQTLNPTQPPPSPALTKEPHKFFDQVIITVRGGDGGHGAILNQK 92

Query: 67  ----------KVKEEKETKNWKKSSFKRDFDGSIVLPLGGHGGDVLVYADESKDTLLEFH 116
                     K K+     + KKS+ KRDFDGS++LP+GGHGGDV++YADE KDTLLEFH
Sbjct: 93  PKKEIEKPKSKTKKAIIDNSHKKSALKRDFDGSLILPMGGHGGDVILYADEGKDTLLEFH 152

Query: 117 NKGRFNAKRGGNVDAMGLLTSHLRDGLAAPTLRIAVPLGTVVKSKRGKTLADLAQPGDEV 176
           +K RFNAKRGGNVDA+G+ TS+LR+G++APT+RI VPLGTVVKSKRGK LADLA+PGDEV
Sbjct: 153 SKSRFNAKRGGNVDAVGVFTSYLRNGISAPTVRIPVPLGTVVKSKRGKMLADLARPGDEV 212

Query: 177 IVARGGQGG----------------------------VLVHGQPGEEVKLELILRVVADV 208
           +VARGGQGG                            VLVHGQPGEEVKLELILRVVADV
Sbjct: 213 LVARGGQGGISLLEMPRHNRKKATSLTTNVMRDDSDKVLVHGQPGEEVKLELILRVVADV 272

Query: 209 GLIGLPNAGKSTLLAAITLAKPDIADYPFTTLMPNLGRLGGDPSLGAGMYSSEATLADLP 268
           GLIGLPNAGKSTLLAAITLAKPDIADYPFTTLMPNLGRL GDP+LGAGMYSSEATLADLP
Sbjct: 273 GLIGLPNAGKSTLLAAITLAKPDIADYPFTTLMPNLGRLDGDPNLGAGMYSSEATLADLP 332

Query: 269 GLIEGAHLGKGLGRNFXXXXXXXXXXXXXXDAATEDPINDYRTVREELRMYNPEYLERPY 328
           GLIEGAHLGKGLGRNF              DA+TE+P+NDYRTVREELRMYNPEYLERPY
Sbjct: 333 GLIEGAHLGKGLGRNFLRHLRRTRLLVHVVDASTENPVNDYRTVREELRMYNPEYLERPY 392

Query: 329 IVVLNKIDLPEVKDRLPLLTREILRIGNDGAASEQKEQSEVAAQLLSDESDKKERTLEDY 388
           IVVLNKIDLPEV+DRLP LT+EI+RIG++GAASE K  SEV+AQLLS+ESD KE+ LEDY
Sbjct: 393 IVVLNKIDLPEVEDRLPTLTQEIMRIGSNGAASEPKPSSEVSAQLLSEESDPKEKKLEDY 452

Query: 389 XXXXXXXXXXXXKGIRIKEMLKEIRAALRKCKDSNE 424
                       K IR+ EMLKEIRAALR+C DS E
Sbjct: 453 PRPHSVIGVSVLKRIRVSEMLKEIRAALRQCVDSKE 488


>Medtr2g019790.1 | Obg family GTPase CgtA | HC |
           chr2:6528744-6523643 | 20130731
          Length = 617

 Score =  163 bits (412), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 109/319 (34%), Positives = 167/319 (52%), Gaps = 57/319 (17%)

Query: 44  KYFDHAVITVRGGDGGHGAVLNQKVKEEKETKNWKKSSFKRDFDGSIVLPLGGHGG---- 99
           + FD A I  + GDGG+G++                 +F+R+      +P GG  G    
Sbjct: 161 RCFDRAKIFAKAGDGGNGSM-----------------AFRRE----KYVPFGGPSGGDGG 199

Query: 100 ---DVLVYADESKDTLLEFHNKGRFNAKRGGNVDAMGLLTSHLRDGLAAPTLRIAVPLGT 156
              +V V  D++ ++LL F N   F A RG +          ++ G     + + VP GT
Sbjct: 200 RGGNVYVEVDKAMNSLLPFRNGIHFRAGRGSHGQG------RMQIGAKGDDVVVKVPPGT 253

Query: 157 VVK-SKRGKTLADLAQPGDEVIV------------ARGGQGG---VLVHGQPGEEVKLEL 200
           V++ + R + + ++  PG + ++             + G      +  +G+ G E+ LEL
Sbjct: 254 VIREAGREEVILEMVYPGQKALLLPGGRGGRGNAAFKSGSNKAPKIAENGEQGHEMWLEL 313

Query: 201 ILRVVADVGLIGLPNAGKSTLLAAITLAKPDIADYPFTTLMPNLGRLGGDPSLGAGMYSS 260
            L++VADVG++G PNAGKSTLL+ ++ AKP++A+YPFTTL+PNLG +  D       Y S
Sbjct: 314 ELKLVADVGIVGAPNAGKSTLLSVVSAAKPEVANYPFTTLLPNLGVVSFD-------YDS 366

Query: 261 EATLADLPGLIEGAHLGKGLGRNFXXXXXXXXXXXXXXDAATEDPINDYRTVREELRMYN 320
              +ADLPGL+EGAH G GLG  F              D ++  P  ++  VR EL+++N
Sbjct: 367 TMVVADLPGLLEGAHRGFGLGHEFLRHTERCSALIHVVDGSSPQPDLEFDAVRLELKLFN 426

Query: 321 PEYLERPYIVVLNKIDLPE 339
           PE  E+P+IV  NK+DLPE
Sbjct: 427 PELAEKPFIVAYNKMDLPE 445


>Medtr2g019790.2 | Obg family GTPase CgtA | HC |
           chr2:6528707-6523643 | 20130731
          Length = 617

 Score =  163 bits (412), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 109/319 (34%), Positives = 167/319 (52%), Gaps = 57/319 (17%)

Query: 44  KYFDHAVITVRGGDGGHGAVLNQKVKEEKETKNWKKSSFKRDFDGSIVLPLGGHGG---- 99
           + FD A I  + GDGG+G++                 +F+R+      +P GG  G    
Sbjct: 161 RCFDRAKIFAKAGDGGNGSM-----------------AFRRE----KYVPFGGPSGGDGG 199

Query: 100 ---DVLVYADESKDTLLEFHNKGRFNAKRGGNVDAMGLLTSHLRDGLAAPTLRIAVPLGT 156
              +V V  D++ ++LL F N   F A RG +          ++ G     + + VP GT
Sbjct: 200 RGGNVYVEVDKAMNSLLPFRNGIHFRAGRGSHGQG------RMQIGAKGDDVVVKVPPGT 253

Query: 157 VVK-SKRGKTLADLAQPGDEVIV------------ARGGQGG---VLVHGQPGEEVKLEL 200
           V++ + R + + ++  PG + ++             + G      +  +G+ G E+ LEL
Sbjct: 254 VIREAGREEVILEMVYPGQKALLLPGGRGGRGNAAFKSGSNKAPKIAENGEQGHEMWLEL 313

Query: 201 ILRVVADVGLIGLPNAGKSTLLAAITLAKPDIADYPFTTLMPNLGRLGGDPSLGAGMYSS 260
            L++VADVG++G PNAGKSTLL+ ++ AKP++A+YPFTTL+PNLG +  D       Y S
Sbjct: 314 ELKLVADVGIVGAPNAGKSTLLSVVSAAKPEVANYPFTTLLPNLGVVSFD-------YDS 366

Query: 261 EATLADLPGLIEGAHLGKGLGRNFXXXXXXXXXXXXXXDAATEDPINDYRTVREELRMYN 320
              +ADLPGL+EGAH G GLG  F              D ++  P  ++  VR EL+++N
Sbjct: 367 TMVVADLPGLLEGAHRGFGLGHEFLRHTERCSALIHVVDGSSPQPDLEFDAVRLELKLFN 426

Query: 321 PEYLERPYIVVLNKIDLPE 339
           PE  E+P+IV  NK+DLPE
Sbjct: 427 PELAEKPFIVAYNKMDLPE 445


>Medtr1g073010.1 | Obg family GTPase CgtA | HC |
           chr1:32424577-32421281 | 20130731
          Length = 512

 Score =  108 bits (269), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 74/213 (34%), Positives = 99/213 (46%), Gaps = 50/213 (23%)

Query: 166 LADLAQPGDEVIVARGGQGGV-----------------------------------LVHG 190
           +A+L + G ++IVARGG+GG+                                   L  G
Sbjct: 250 VAELTEEGQQIIVARGGEGGLGNVSIQKDPRKPPTTKAGAGQHVTNLQDTDSVNSSLSTG 309

Query: 191 QPGEEVKLELILRVVADVGLIGLPNAGKSTLLAAITLAKPDIADYPFTTLMPNLGRLGGD 250
            PG E  L L L+ +ADV  +G+PNAGKSTLL AI+ AKP +  Y FTTL PNLG L  D
Sbjct: 310 LPGSESVLILELKCIADVSFVGMPNAGKSTLLGAISRAKPAVGHYAFTTLRPNLGNLNYD 369

Query: 251 PSLGAGMYSSEATLADLPGLIEGAHLGKGLGRNFXXXXXXXXXXXXXXDAATEDP----I 306
                        +AD+PGLI+GAH  +GLG  F              D A   P    I
Sbjct: 370 --------DMSIIVADIPGLIKGAHQNRGLGHAFLRHIERTKVLAYVVDVAAALPGRKGI 421

Query: 307 NDYRTVRE---ELRMYNPEYLERPYIVVLNKID 336
           + +  +++   EL  +      RP ++V NKID
Sbjct: 422 SPWEQLKDLVLELEYHLEGLSNRPSLIVANKID 454


>Medtr2g030370.1 | GTP-binding protein | HC | chr2:11409528-11417205
           | 20130731
          Length = 394

 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 61/137 (44%), Gaps = 19/137 (13%)

Query: 208 VGLIGLPNAGKSTLLAAITLAKPDIADYPFTTLMPNLGRLGGDPSLGAGM---------Y 258
           +G++GLPN GKSTL   +T       ++PF T+ PN  R+         +          
Sbjct: 27  IGIVGLPNVGKSTLFNTLTKMAIPAENFPFCTIEPNEARVNVPDERFEWLCQLFKPKSEV 86

Query: 259 SSEATLADLPGLIEGAHLGKGLGRNFXXXXXXXXXXXXXXDAA----------TEDPIND 308
           S+   + D+ GL+ GAH G+GLG +F               A           T DP+ D
Sbjct: 87  SAFLEIHDIAGLVRGAHQGQGLGNSFLSHIRAVDGIFHVLRAFEDPDIIHVDDTVDPVRD 146

Query: 309 YRTVREELRMYNPEYLE 325
              + EELR+ + E+++
Sbjct: 147 LEVITEELRLKDIEFMQ 163


>Medtr3g094880.1 | developmentally regulated GTP-binding protein |
           HC | chr3:43301025-43311806 | 20130731
          Length = 368

 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 42/113 (37%), Positives = 54/113 (47%), Gaps = 14/113 (12%)

Query: 206 ADVGLIGLPNAGKSTLLAAITLAKPDIADYPFTTL--MPNLGRLGGDPSLGAGMYSSEAT 263
           A VGL+G P+ GKSTLL  +T    ++A Y FTTL  +P +    G          ++  
Sbjct: 65  ARVGLVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCIPGVITYRG----------AKIQ 114

Query: 264 LADLPGLIEGAHLGKGLGRNFXXXXXXXXXXXXXXDAATEDPINDYRTVREEL 316
           L DLPG+IEGA  GKG GR                DA    PI   R + +EL
Sbjct: 115 LLDLPGIIEGAKDGKGRGRQVISTARTCNCILIVLDAI--KPITHKRLIEKEL 165


>Medtr2g030335.1 | 50S ribosome-binding GTPase | LC |
           chr2:11392921-11395427 | 20130731
          Length = 209

 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 9/86 (10%)

Query: 208 VGLIGLPNAGKSTLLAAITLAKPDIADYPFTTLMPNLGRLGGDPSLGAGM---------Y 258
           +G++GLPN GKSTL   +T       ++PF T+ PN  R+         +          
Sbjct: 27  IGIVGLPNVGKSTLFNTLTKMAIPAENFPFCTIEPNEARVNVPDERFEWLCQLFKPKSEV 86

Query: 259 SSEATLADLPGLIEGAHLGKGLGRNF 284
           S+   + D+ GL+ GAH G+GLG +F
Sbjct: 87  SAFLEIHDIAGLVRGAHQGQGLGNSF 112