Miyakogusa Predicted Gene

Lj5g3v0144400.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0144400.1 tr|F4WWA3|F4WWA3_ACREC Protein C20orf11
OS=Acromyrmex echinatior GN=G5I_10218 PE=4
SV=1,36.2,3e-19,CLTH,CTLH/CRA C-terminal to LisH motif domain;
LISH,LisH dimerisation motif; CTLH,CTLH, C-terminal L,CUFF.52637.1
         (201 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g019870.1 | LisH and RanBPM domain protein | HC | chr1:606...   328   2e-90
Medtr2g012810.1 | LisH and RanBPM domain protein | HC | chr2:330...    83   2e-16
Medtr2g012810.2 | LisH and RanBPM domain protein | HC | chr2:330...    79   3e-15
Medtr4g032800.1 | SPla/RYanodine receptor (SPRY) domain protein ...    70   2e-12

>Medtr1g019870.1 | LisH and RanBPM domain protein | HC |
           chr1:6062059-6066368 | 20130731
          Length = 216

 Score =  328 bits (842), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 156/201 (77%), Positives = 179/201 (89%)

Query: 1   MEPDPRQYEKIAINEKDIPNIVLSYLIHNCYEESVESFISCTGIKKPADYLENMEKRKKI 60
           M+ DPRQY+ IAI+EKD+ NIVLSYLIHNCYEES ESF++ TG K+P DYL+NMEKRKKI
Sbjct: 1   MDVDPRQYDNIAISEKDVSNIVLSYLIHNCYEESAESFMAGTGAKRPTDYLDNMEKRKKI 60

Query: 61  FHYALERNALKAIELTEQLAKDILENNKDLLFDLLSLHFVELVRSRKCTEALEFAQTKLS 120
           FH  LE NALKAIELTEQL  +IL  N DLLFDLLSLHFVELVRSRKCTEAL+FAQTKLS
Sbjct: 61  FHSVLEGNALKAIELTEQLTPEILVKNTDLLFDLLSLHFVELVRSRKCTEALDFAQTKLS 120

Query: 121 PFGKEQKYMQNLEDFMALLAYQEPEKSPVFHLLSPEYRQQVADRLNRAILAYFNLPSHTA 180
           PFGK+ +Y + L+DFMALLAY+EPE SP+FHLLS EYRQ++AD LNR ILAYFNLP++TA
Sbjct: 121 PFGKDGQYTEKLQDFMALLAYKEPEDSPMFHLLSLEYRQELADSLNRTILAYFNLPNYTA 180

Query: 181 MERLIQQTTVVRQCLSQEAGK 201
           ME+LIQQTTVVRQCL++EAGK
Sbjct: 181 MEKLIQQTTVVRQCLNEEAGK 201


>Medtr2g012810.1 | LisH and RanBPM domain protein | HC |
           chr2:3306938-3301342 | 20130731
          Length = 241

 Score = 82.8 bits (203), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 53/166 (31%), Positives = 88/166 (53%), Gaps = 2/166 (1%)

Query: 6   RQYEKIAINEKDIPNIVLSYLIHNCYEESVESFISCTGIKKPADYLENMEKRKKIFHYAL 65
           ++   + I ++D+  +V+++L+   + ++ E F   +G +   D L  +  R  +     
Sbjct: 31  KKLNNVKIRKEDMNKLVMNFLVTEGFVDAAEKFRKESGTEPDID-LATITDRMAVKKAVQ 89

Query: 66  ERNALKAIELTEQLAKDILENNKDLLFDLLSLHFVELVRSRKCTEALEFAQTKLSPFGKE 125
             N   AIE    L  +IL+ N  L F L     +EL+R+ K  EALEFAQ +L+P G+E
Sbjct: 90  SGNVEDAIEKVNDLNPEILDTNPQLFFHLQQQRLIELIRNGKIEEALEFAQEELAPRGEE 149

Query: 126 -QKYMQNLEDFMALLAYQEPEKSPVFHLLSPEYRQQVADRLNRAIL 170
            Q +++ LE  +ALLA+++    PV  LL    R + A  +N AIL
Sbjct: 150 NQSFLEELERTVALLAFEDVSNCPVGELLDISQRLKTASEVNAAIL 195


>Medtr2g012810.2 | LisH and RanBPM domain protein | HC |
           chr2:3305823-3301342 | 20130731
          Length = 199

 Score = 79.0 bits (193), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 51/151 (33%), Positives = 80/151 (52%), Gaps = 2/151 (1%)

Query: 21  IVLSYLIHNCYEESVESFISCTGIKKPADYLENMEKRKKIFHYALERNALKAIELTEQLA 80
           +V+++L+   + ++ E F   +G +   D L  +  R  +       N   AIE    L 
Sbjct: 4   LVMNFLVTEGFVDAAEKFRKESGTEPDID-LATITDRMAVKKAVQSGNVEDAIEKVNDLN 62

Query: 81  KDILENNKDLLFDLLSLHFVELVRSRKCTEALEFAQTKLSPFGKE-QKYMQNLEDFMALL 139
            +IL+ N  L F L     +EL+R+ K  EALEFAQ +L+P G+E Q +++ LE  +ALL
Sbjct: 63  PEILDTNPQLFFHLQQQRLIELIRNGKIEEALEFAQEELAPRGEENQSFLEELERTVALL 122

Query: 140 AYQEPEKSPVFHLLSPEYRQQVADRLNRAIL 170
           A+++    PV  LL    R + A  +N AIL
Sbjct: 123 AFEDVSNCPVGELLDISQRLKTASEVNAAIL 153


>Medtr4g032800.1 | SPla/RYanodine receptor (SPRY) domain protein |
           HC | chr4:11335272-11345067 | 20130731
          Length = 468

 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 109/229 (47%), Gaps = 31/229 (13%)

Query: 2   EPDPRQYEKIAINEKDI-PN----IVLSYLIHNCYEESVESFISCTGIKKPA------DY 50
           E   R  ++I I E  + PN    IV SYL+H  YE+++ SF   +    P       + 
Sbjct: 228 EAQERMKQQIKIEEVPVSPNASYGIVRSYLLHYGYEDTLNSFDEASRSTIPPINIVQENG 287

Query: 51  LENMEKRKKIFHYALERNALKAIELTEQLAK------DILENNKDLLFDLLSLH-FVELV 103
           +++ E    + H    R  ++  E+     K       I E+N   +  LL    F+ELV
Sbjct: 288 IDDQETTYALNHRKTLRQLIRDGEIDAAFGKLREWYPQIAEDNTSAMCFLLHCQKFIELV 347

Query: 104 RSRKCTEALEFAQTKLSPFGKEQKYMQNLEDFMALLAYQEPEKSPVFHLLSPEYRQQVAD 163
           R     EA+++ + +LS F     +   ++D +ALLAY+ P +S V +LL    R+ VAD
Sbjct: 348 RVGALEEAVKYGRIELSSFFGLSLFEDIVQDCVALLAYERPLESAVGYLLKDSQREVVAD 407

Query: 164 RLNRAILAYFNLPS--------HTAMERLIQQTTVV---RQCLSQEAGK 201
            +N  IL+    P+        H+ +ERL++Q T     R+ LS E G+
Sbjct: 408 AVNAMILS--TNPNIKVTKNCLHSNLERLLRQLTACCLERRSLSGEQGE 454