Miyakogusa Predicted Gene

Lj5g3v0112040.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0112040.1 Non Characterized Hit- tr|I1GQK0|I1GQK0_BRADI
Uncharacterized protein OS=Brachypodium distachyon GN=,70.59,2e-19,
,NODE_17573_length_663_cov_119.892914.path2.1
         (151 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g022485.1 | nuclease in basal defense response protein | H...   219   8e-58
Medtr3g112160.1 | wound-responsive family protein | HC | chr3:52...   173   5e-44
Medtr3g112160.2 | wound-responsive family protein | HC | chr3:52...   173   6e-44

>Medtr1g022485.1 | nuclease in basal defense response protein | HC |
           chr1:7218807-7215469 | 20130731
          Length = 359

 Score =  219 bits (558), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 110/158 (69%), Positives = 129/158 (81%), Gaps = 13/158 (8%)

Query: 1   MGSVQGPAVCPS---KLAGFCSLPMMGPMNVRCIRSEFLGLNGGGSKAKQRGFLSCDVNT 57
           M S++GP  CPS   K+AGFC+LP++GPMNVRC+++EF GL     K  +R FLS  +NT
Sbjct: 35  MASLKGPVACPSIHPKVAGFCTLPLIGPMNVRCVKTEFWGL-----KEFKRSFLSYHINT 89

Query: 58  RKCWTVVRCSFNPSSSND----SENFIEKDEEYVNSSVIEAVEVKSGADGFIIKMRDGRH 113
           RK  TVV CS N S SND    +E+F EKDE+YV+SSVIEAVEVKSGADGFIIKMRDG+H
Sbjct: 90  RKSKTVVHCSLN-SPSNDGGSMAESFNEKDEDYVSSSVIEAVEVKSGADGFIIKMRDGKH 148

Query: 114 LRCVHNNPQGGHLPDYAPHPAIVLKMEDGTGLLLPIIV 151
           LRCVHNNPQGGHLPDY+PHPA+VLKMEDG+ LLLPIIV
Sbjct: 149 LRCVHNNPQGGHLPDYSPHPAMVLKMEDGSDLLLPIIV 186


>Medtr3g112160.1 | wound-responsive family protein | HC |
           chr3:52496109-52492599 | 20130731
          Length = 325

 Score =  173 bits (439), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 96/154 (62%), Positives = 113/154 (73%), Gaps = 11/154 (7%)

Query: 1   MGSVQGPAVCPSKLAGFCSLPMMGPMNVRCIRSEFLGLNGGGSKAKQRGFLSCDVNTRKC 60
           M  V+G A+C        ++PM+GP+N  C R E  G +   S   +   LSC VN RKC
Sbjct: 4   MVCVKGSAMCS------VAMPMIGPINAGCSRIELWGFSA--SNKIKPNSLSCHVNMRKC 55

Query: 61  WTVVRCSFNPSSSND---SENFIEKDEEYVNSSVIEAVEVKSGADGFIIKMRDGRHLRCV 117
            TV+ CSFN SS+     +ENF E DE+YVNS+++EAVEVKSGADGFI+KMRDGRHLRCV
Sbjct: 56  RTVMNCSFNSSSNGSGSMAENFNENDEDYVNSTILEAVEVKSGADGFIVKMRDGRHLRCV 115

Query: 118 HNNPQGGHLPDYAPHPAIVLKMEDGTGLLLPIIV 151
           HN+P GG LPDYAPHPAIVLKMEDGTGLLLPIIV
Sbjct: 116 HNSPHGGLLPDYAPHPAIVLKMEDGTGLLLPIIV 149


>Medtr3g112160.2 | wound-responsive family protein | HC |
           chr3:52496109-52492711 | 20130731
          Length = 235

 Score =  173 bits (438), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 96/154 (62%), Positives = 113/154 (73%), Gaps = 11/154 (7%)

Query: 1   MGSVQGPAVCPSKLAGFCSLPMMGPMNVRCIRSEFLGLNGGGSKAKQRGFLSCDVNTRKC 60
           M  V+G A+C        ++PM+GP+N  C R E  G +   S   +   LSC VN RKC
Sbjct: 4   MVCVKGSAMCS------VAMPMIGPINAGCSRIELWGFSA--SNKIKPNSLSCHVNMRKC 55

Query: 61  WTVVRCSFNPSSSND---SENFIEKDEEYVNSSVIEAVEVKSGADGFIIKMRDGRHLRCV 117
            TV+ CSFN SS+     +ENF E DE+YVNS+++EAVEVKSGADGFI+KMRDGRHLRCV
Sbjct: 56  RTVMNCSFNSSSNGSGSMAENFNENDEDYVNSTILEAVEVKSGADGFIVKMRDGRHLRCV 115

Query: 118 HNNPQGGHLPDYAPHPAIVLKMEDGTGLLLPIIV 151
           HN+P GG LPDYAPHPAIVLKMEDGTGLLLPIIV
Sbjct: 116 HNSPHGGLLPDYAPHPAIVLKMEDGTGLLLPIIV 149