Miyakogusa Predicted Gene

Lj5g3v0109850.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0109850.1 Non Characterized Hit- tr|B8A1Y4|B8A1Y4_MAIZE
Uncharacterized protein OS=Zea mays PE=2 SV=1,59.09,3e-18,Hypothetical
protein TM0160,Bifunctional nuclease; DNase-RNase,Bifunctional
nuclease,CUFF.52836.1
         (327 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g022485.1 | nuclease in basal defense response protein | H...   525   e-149
Medtr3g112160.1 | wound-responsive family protein | HC | chr3:52...   488   e-138
Medtr3g112160.2 | wound-responsive family protein | HC | chr3:52...   323   2e-88
Medtr5g023110.2 | wound-responsive family protein | HC | chr5:91...   117   2e-26
Medtr5g023110.3 | wound-responsive family protein | HC | chr5:91...   117   2e-26
Medtr5g023110.1 | wound-responsive family protein | HC | chr5:91...   117   2e-26

>Medtr1g022485.1 | nuclease in basal defense response protein | HC |
           chr1:7218807-7215469 | 20130731
          Length = 359

 Score =  525 bits (1352), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 258/331 (77%), Positives = 288/331 (87%), Gaps = 13/331 (3%)

Query: 1   MGSVQGPAVCPS---KLAGFCSLPMMGPMNVRCIRSEFLGLNGGGSKAKQRGFLSCDVNT 57
           M S++GP  CPS   K+AGFC+LP++GPMNVRC+++EF GL     K  +R FLS  +NT
Sbjct: 35  MASLKGPVACPSIHPKVAGFCTLPLIGPMNVRCVKTEFWGL-----KEFKRSFLSYHINT 89

Query: 58  RKCWTVVRCSFNPSSSND----SENFIEKDEEYVNSSVIEAVEVKSGADGFIIKMRDGRH 113
           RK  TVV CS N S SND    +E+F EKDE+YV+SSVIEAVEVKSGADGFIIKMRDG+H
Sbjct: 90  RKSKTVVHCSLN-SPSNDGGSMAESFNEKDEDYVSSSVIEAVEVKSGADGFIIKMRDGKH 148

Query: 114 LRCVHNNPQGGHLPDYAPHPAIVLKMEDGTGLLLPIIVLEMPSVLLMAAIRDVPIARPTL 173
           LRCVHNNPQGGHLPDY+PHPA+VLKMEDG+ LLLPIIVLEMPSVLL+AA+R+V IARPTL
Sbjct: 149 LRCVHNNPQGGHLPDYSPHPAMVLKMEDGSDLLLPIIVLEMPSVLLLAAVRNVSIARPTL 208

Query: 174 YQVVKEMIDKMGYEVRLVRVTRRVHEAYFAQLYLTKVGNEAECRTFDLRPSDAINIAVRC 233
           Y+VV EMI KMGY+V+LVRVTRRV EAYFAQLYLTKVGNEAECR+FDLRPSDAINIAVRC
Sbjct: 209 YEVVMEMIGKMGYQVKLVRVTRRVDEAYFAQLYLTKVGNEAECRSFDLRPSDAINIAVRC 268

Query: 234 KVPIQVNKYLAYSDGMRVIESGKLSTQFPGFDGRLFTEMDRPNGQPCVETEEFNLLHNML 293
           KVPIQVNKYLA SDGMRVIESGKL TQ P FDGRLFTEMD+PNGQPC ET+EFNLL+NML
Sbjct: 269 KVPIQVNKYLASSDGMRVIESGKLPTQIPSFDGRLFTEMDKPNGQPCAETDEFNLLNNML 328

Query: 294 KAVGEERYKDAALWRDRLNQLRAGKNVNNRS 324
           KAV EERY DAALWRDRLNQ RAGKN+  RS
Sbjct: 329 KAVDEERYDDAALWRDRLNQHRAGKNMKKRS 359


>Medtr3g112160.1 | wound-responsive family protein | HC |
           chr3:52496109-52492599 | 20130731
          Length = 325

 Score =  488 bits (1257), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 247/330 (74%), Positives = 276/330 (83%), Gaps = 11/330 (3%)

Query: 1   MGSVQGPAVCPSKLAGFCSLPMMGPMNVRCIRSEFLGLNGGGSKAKQRGFLSCDVNTRKC 60
           M  V+G A+C        ++PM+GP+N  C R E  G +   S   +   LSC VN RKC
Sbjct: 4   MVCVKGSAMCS------VAMPMIGPINAGCSRIELWGFSA--SNKIKPNSLSCHVNMRKC 55

Query: 61  WTVVRCSFNPSSSND---SENFIEKDEEYVNSSVIEAVEVKSGADGFIIKMRDGRHLRCV 117
            TV+ CSFN SS+     +ENF E DE+YVNS+++EAVEVKSGADGFI+KMRDGRHLRCV
Sbjct: 56  RTVMNCSFNSSSNGSGSMAENFNENDEDYVNSTILEAVEVKSGADGFIVKMRDGRHLRCV 115

Query: 118 HNNPQGGHLPDYAPHPAIVLKMEDGTGLLLPIIVLEMPSVLLMAAIRDVPIARPTLYQVV 177
           HN+P GG LPDYAPHPAIVLKMEDGTGLLLPIIVLEMPSVLLMAA+R+V IARPTLYQVV
Sbjct: 116 HNSPHGGLLPDYAPHPAIVLKMEDGTGLLLPIIVLEMPSVLLMAAVRNVQIARPTLYQVV 175

Query: 178 KEMIDKMGYEVRLVRVTRRVHEAYFAQLYLTKVGNEAECRTFDLRPSDAINIAVRCKVPI 237
           KEMIDKMGYEVR VRVT+RV EAYFAQ+YL+KVGNE+EC +FDLRPSDAINIAVRCKVPI
Sbjct: 176 KEMIDKMGYEVRAVRVTKRVQEAYFAQIYLSKVGNESECMSFDLRPSDAINIAVRCKVPI 235

Query: 238 QVNKYLAYSDGMRVIESGKLSTQFPGFDGRLFTEMDRPNGQPCVETEEFNLLHNMLKAVG 297
           QVNKYLAYSDGMRVIESGKLSTQ PG DG LFTE+DRPNG+PCVET+EFNLLHNML AV 
Sbjct: 236 QVNKYLAYSDGMRVIESGKLSTQSPGSDGPLFTELDRPNGKPCVETKEFNLLHNMLTAVV 295

Query: 298 EERYKDAALWRDRLNQLRAGKNVNNRSWTL 327
           EERY+DAALWRD+LNQ RA K  NNRSWTL
Sbjct: 296 EERYQDAALWRDQLNQFRAEKKANNRSWTL 325


>Medtr3g112160.2 | wound-responsive family protein | HC |
           chr3:52496109-52492711 | 20130731
          Length = 235

 Score =  323 bits (827), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 168/237 (70%), Positives = 192/237 (81%), Gaps = 11/237 (4%)

Query: 1   MGSVQGPAVCPSKLAGFCSLPMMGPMNVRCIRSEFLGLNGGGSKAKQRGFLSCDVNTRKC 60
           M  V+G A+C        ++PM+GP+N  C R E  G +   S   +   LSC VN RKC
Sbjct: 4   MVCVKGSAMCS------VAMPMIGPINAGCSRIELWGFSA--SNKIKPNSLSCHVNMRKC 55

Query: 61  WTVVRCSFNPSSSND---SENFIEKDEEYVNSSVIEAVEVKSGADGFIIKMRDGRHLRCV 117
            TV+ CSFN SS+     +ENF E DE+YVNS+++EAVEVKSGADGFI+KMRDGRHLRCV
Sbjct: 56  RTVMNCSFNSSSNGSGSMAENFNENDEDYVNSTILEAVEVKSGADGFIVKMRDGRHLRCV 115

Query: 118 HNNPQGGHLPDYAPHPAIVLKMEDGTGLLLPIIVLEMPSVLLMAAIRDVPIARPTLYQVV 177
           HN+P GG LPDYAPHPAIVLKMEDGTGLLLPIIVLEMPSVLLMAA+R+V IARPTLYQVV
Sbjct: 116 HNSPHGGLLPDYAPHPAIVLKMEDGTGLLLPIIVLEMPSVLLMAAVRNVQIARPTLYQVV 175

Query: 178 KEMIDKMGYEVRLVRVTRRVHEAYFAQLYLTKVGNEAECRTFDLRPSDAINIAVRCK 234
           KEMIDKMGYEVR VRVT+RV EAYFAQ+YL+KVGNE+EC +FDLRPSDAINIAVRCK
Sbjct: 176 KEMIDKMGYEVRAVRVTKRVQEAYFAQIYLSKVGNESECMSFDLRPSDAINIAVRCK 232


>Medtr5g023110.2 | wound-responsive family protein | HC |
           chr5:9180372-9183953 | 20130731
          Length = 326

 Score =  117 bits (293), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 66/187 (35%), Positives = 113/187 (60%), Gaps = 7/187 (3%)

Query: 133 PAIVLKMEDGTGLLLPIIVLEMPSVLLMAAIRDVPIAR-PTLYQVVKEMIDKMGYEVRLV 191
           P I LK+      +LPI+V ++    L+ A  +  I   P  +Q V  +++++ +EV +V
Sbjct: 141 PTIFLKISCDGDYVLPIVVGKIAIEKLIDAEVEQEIEDWPDQFQFVNNLVERLDHEVIMV 200

Query: 192 RVTRRVHEAYFAQLYLTKVGNEAECRTFDLRPSDAINIAVRCKVPIQVNKYLAYSDGMRV 251
           R+T RV   YFA+LYL++ G +++  + DLRPSDAIN+A +CK PI V+K + ++D +R+
Sbjct: 201 RITERVVSTYFARLYLSQPG-KSDIISVDLRPSDAINVANKCKAPIYVSKEIVFTDAIRL 259

Query: 252 -IESGKLSTQFPGFDGRLFTEMDRPNGQPCVETEEFNLLHNMLKAVGEERYKDAALWRDR 310
               G++  +   +D  L + +D P+       +E +++HNM  A+ +ER+ DAA WR++
Sbjct: 260 GYGMGRVHNKKAIYDVLLDSAIDGPDSV----AQELSMMHNMHLAIKQERFNDAATWRNK 315

Query: 311 LNQLRAG 317
           L  LR  
Sbjct: 316 LENLRKS 322


>Medtr5g023110.3 | wound-responsive family protein | HC |
           chr5:9180345-9183958 | 20130731
          Length = 326

 Score =  117 bits (293), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 66/187 (35%), Positives = 113/187 (60%), Gaps = 7/187 (3%)

Query: 133 PAIVLKMEDGTGLLLPIIVLEMPSVLLMAAIRDVPIAR-PTLYQVVKEMIDKMGYEVRLV 191
           P I LK+      +LPI+V ++    L+ A  +  I   P  +Q V  +++++ +EV +V
Sbjct: 141 PTIFLKISCDGDYVLPIVVGKIAIEKLIDAEVEQEIEDWPDQFQFVNNLVERLDHEVIMV 200

Query: 192 RVTRRVHEAYFAQLYLTKVGNEAECRTFDLRPSDAINIAVRCKVPIQVNKYLAYSDGMRV 251
           R+T RV   YFA+LYL++ G +++  + DLRPSDAIN+A +CK PI V+K + ++D +R+
Sbjct: 201 RITERVVSTYFARLYLSQPG-KSDIISVDLRPSDAINVANKCKAPIYVSKEIVFTDAIRL 259

Query: 252 -IESGKLSTQFPGFDGRLFTEMDRPNGQPCVETEEFNLLHNMLKAVGEERYKDAALWRDR 310
               G++  +   +D  L + +D P+       +E +++HNM  A+ +ER+ DAA WR++
Sbjct: 260 GYGMGRVHNKKAIYDVLLDSAIDGPDSV----AQELSMMHNMHLAIKQERFNDAATWRNK 315

Query: 311 LNQLRAG 317
           L  LR  
Sbjct: 316 LENLRKS 322


>Medtr5g023110.1 | wound-responsive family protein | HC |
           chr5:9180345-9184014 | 20130731
          Length = 326

 Score =  117 bits (293), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 66/187 (35%), Positives = 113/187 (60%), Gaps = 7/187 (3%)

Query: 133 PAIVLKMEDGTGLLLPIIVLEMPSVLLMAAIRDVPIAR-PTLYQVVKEMIDKMGYEVRLV 191
           P I LK+      +LPI+V ++    L+ A  +  I   P  +Q V  +++++ +EV +V
Sbjct: 141 PTIFLKISCDGDYVLPIVVGKIAIEKLIDAEVEQEIEDWPDQFQFVNNLVERLDHEVIMV 200

Query: 192 RVTRRVHEAYFAQLYLTKVGNEAECRTFDLRPSDAINIAVRCKVPIQVNKYLAYSDGMRV 251
           R+T RV   YFA+LYL++ G +++  + DLRPSDAIN+A +CK PI V+K + ++D +R+
Sbjct: 201 RITERVVSTYFARLYLSQPG-KSDIISVDLRPSDAINVANKCKAPIYVSKEIVFTDAIRL 259

Query: 252 -IESGKLSTQFPGFDGRLFTEMDRPNGQPCVETEEFNLLHNMLKAVGEERYKDAALWRDR 310
               G++  +   +D  L + +D P+       +E +++HNM  A+ +ER+ DAA WR++
Sbjct: 260 GYGMGRVHNKKAIYDVLLDSAIDGPDSV----AQELSMMHNMHLAIKQERFNDAATWRNK 315

Query: 311 LNQLRAG 317
           L  LR  
Sbjct: 316 LENLRKS 322