Miyakogusa Predicted Gene

Lj5g3v0108330.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0108330.1 tr|B1YJM5|B1YJM5_EXIS2 Ornithine
carbamoyltransferase, catabolic OS=Exiguobacterium sibiricum
(strai,54.55,2e-19,AOTCASE,Aspartate/ornithine carbamoyltransferase;
seg,NULL; Aspartate/ornithine carbamoyltransferase,CUFF.52553.1
         (78 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g022420.1 | ornithine carbamoyltransferase | HC | chr1:714...   129   9e-31
Medtr3g112050.1 | ornithine carbamoyltransferase | HC | chr3:524...   122   6e-29

>Medtr1g022420.1 | ornithine carbamoyltransferase | HC |
           chr1:7148060-7142631 | 20130731
          Length = 367

 Score =  129 bits (323), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 62/78 (79%), Positives = 65/78 (83%)

Query: 1   MGQXXXXXXXXXXFKGFQVDQSLMDIAGSKALFMHCLPAEKGVEVTEEVIEGPKSIIFPQ 60
           MGQ          FKGFQVDQ+LMD+AGS ALFMHCLPAEKGVEVTEEVIEGPKSIIF Q
Sbjct: 290 MGQKEEAQKRRLMFKGFQVDQNLMDLAGSNALFMHCLPAEKGVEVTEEVIEGPKSIIFAQ 349

Query: 61  AENRLHAQNGIMLHVLGK 78
           AENRLHAQN IMLHVLG+
Sbjct: 350 AENRLHAQNAIMLHVLGE 367


>Medtr3g112050.1 | ornithine carbamoyltransferase | HC |
           chr3:52431040-52427507 | 20130731
          Length = 369

 Score =  122 bits (307), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 57/78 (73%), Positives = 62/78 (79%)

Query: 1   MGQXXXXXXXXXXFKGFQVDQSLMDIAGSKALFMHCLPAEKGVEVTEEVIEGPKSIIFPQ 60
           MGQ          FK FQVDQSLMD AGSKA FMHCLPAE+GVEVTE+V+E P SI+FPQ
Sbjct: 292 MGQKEEAAYRRQVFKEFQVDQSLMDAAGSKAFFMHCLPAERGVEVTEQVVEAPYSIVFPQ 351

Query: 61  AENRLHAQNGIMLHVLGK 78
           AENR+HAQN IMLHVLGK
Sbjct: 352 AENRMHAQNAIMLHVLGK 369