Miyakogusa Predicted Gene
- Lj5g3v0108320.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v0108320.1 Non Characterized Hit- tr|J3NE08|J3NE08_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB12G2,56.47,2e-17,SUBFAMILY NOT NAMED,NULL; AUXILIN/CYCLIN
G-ASSOCIATED KINASE-RELATED,NULL; seg,NULL;
coiled-coil,NUL,CUFF.52567.1
(1282 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g022415.1 | auxilin-like protein | HC | chr1:7135987-71425... 1016 0.0
Medtr8g077150.1 | chaperone DnaJ-domain protein, putative | HC |... 112 2e-24
Medtr8g494210.1 | auxilin-like protein | HC | chr8:39416695-3942... 110 9e-24
Medtr8g077150.2 | chaperone DnaJ-domain protein, putative | HC |... 110 1e-23
Medtr3g096790.2 | DnaJ domain protein | HC | chr3:44297240-44304... 107 1e-22
Medtr3g096790.1 | DnaJ domain protein | HC | chr3:44297240-44304... 106 1e-22
Medtr3g088495.1 | DnaJ domain protein | HC | chr3:40226149-40220... 82 4e-15
Medtr3g088495.3 | DnaJ domain protein | HC | chr3:40226149-40222... 81 7e-15
Medtr3g088495.2 | DnaJ domain protein | HC | chr3:40226149-40220... 81 8e-15
>Medtr1g022415.1 | auxilin-like protein | HC | chr1:7135987-7142594 |
20130731
Length = 1368
Score = 1016 bits (2628), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 649/1390 (46%), Positives = 802/1390 (57%), Gaps = 199/1390 (14%)
Query: 1 MESGAATATLSKKLSNGYGVSGRSAYEGVFAAPIKHRAPSFASPLGDYREIFGAGSGACS 60
ME GA T+TL+KK SN Y V+GRSAY+GVFA PIK R PSF S DY E+FG S A S
Sbjct: 1 MEFGATTSTLTKKHSNSYSVTGRSAYDGVFATPIKLRTPSF-SQFDDYNEVFGC-SDASS 58
Query: 61 SIPILELPDLNEMRAAMDDVSRSKLDYSKXXXXXXXXXXAVPLEDLVAQTKVAEDSFTSR 120
SIPILELP+LNE R ++D RS LDYSK VP E+L+ + K
Sbjct: 59 SIPILELPELNESRM-VEDFQRSNLDYSKVFSGFDNLDTTVPFEELIPKPK--------- 108
Query: 121 APARSKVKSGNQSYQEDRTDCSKEIPAASQSSNDAKRINMSYHQVSQGSQNGTSAKTHIA 180
A RSKVKSG QS +EDR + SKEIP S SSN AK INMSYH+V+QGS+NGT+ THIA
Sbjct: 109 ASKRSKVKSGEQSCREDRVNSSKEIPVISPSSNGAKTINMSYHKVNQGSENGTNGTTHIA 168
Query: 181 QVHAVPAYTCLSEEVNSVKTNRANKPTPVAQDTCSSSYCNEKIKEGGHCMES-------- 232
++HAVPAYTCL EEV+SVKT+RA P A+D S +C+E IKEGG C +S
Sbjct: 169 KLHAVPAYTCLIEEVSSVKTSRAKWSIPAAKDAFSGIHCDEGIKEGGRCDKSSVDASSNN 228
Query: 233 ----FTG--------------------------------PSPAHAKKQSTDHGVKVKHRS 256
F+ SP + KKQS+++G K +RS
Sbjct: 229 VKKQFSNNGGKAINRSDSVDMFYDEGIKEGGLCDKSSVHASPNNVKKQSSNNGGKAINRS 288
Query: 257 NSVDLSYDAREISSGSNVTHHPKVPPSETMASKLDNKNNGDAMRSKETKSQTSKSGAPES 316
+SVD+ YDA E S GS+ H KVPPS+T+ LD+ N+ D RS TK Q S+SG ES
Sbjct: 289 DSVDMFYDACETSKGSDTVHEIKVPPSQTVTDNLDHYNDIDTSRSTATKCQASQSGTYES 348
Query: 317 ATGADSPSYLXXXXXXXXXXXXXXXXLRKAIEEAQVRMKVAKESMRRKKEGFPDRVKRKS 376
A GADSP+YL LRKAIEEAQ+++KVAKESMRRKKEGFPD VK+KS
Sbjct: 349 AAGADSPTYLEDTVDSNSAAAASVAALRKAIEEAQMKIKVAKESMRRKKEGFPDHVKQKS 408
Query: 377 NVDLIAGGRKGAKLENKTMKPEEINTMQTFGEMDALRKVSSELGKPKVRIEQVRSNLGAE 436
++DL +K AKL KT K +EINT QTFGEMDAL +VSS++GK +R E+VRS++G +
Sbjct: 409 SIDLKVKEKKEAKLACKTSKVKEINTRQTFGEMDALLQVSSDVGKLPMRTEKVRSDIGDK 468
Query: 437 EMFVAKEAVRDAQVKLRSSQAEHMEDIEQKEADHKGKVLELKQAENTEKGARIKSTGRNA 496
EM A EAV++ Q KL+ S +H E++E KEADHKGK LELK+A N +K IK+TGRNA
Sbjct: 469 EMCTANEAVQEVQNKLKLSPDKHKEEVELKEADHKGKNLELKEAGNAKKVPYIKNTGRNA 528
Query: 497 SEKPETPDHT----------------VKVMKESGACEELVHEVEYRLQEVVDETKLIQET 540
+EKPE DH V+ + E+ CEELVHE + + QEV ET LI ET
Sbjct: 529 TEKPEESDHAIEMVEEYWEQENGEEKVRAVNEASYCEELVHETKQKCQEVAGETNLIHET 588
Query: 541 LDNA-TDKRMTVNEDGNVENKVTPFHEPEDYASNLGGEGFIIENKEKVACEPEDGKMVEE 599
LD+ TDKR+ V E VENKVTPF+EP+ NLGG+ ++ KE + +PEDGK +
Sbjct: 589 LDSGVTDKRLKVKE---VENKVTPFNEPKGSVINLGGKSSMMRKKESIGYKPEDGKKTKW 645
Query: 600 SLELEGCQKFFRATEELGEG-KSIVQEQXXXXXXXXXXXXXXXCELTEFLEPVDNERVCS 658
S++ E CQK RA +ELG G + I QEQ CELTE E +DNE CS
Sbjct: 646 SIDQEECQKILRAIQELGNGDREISQEQKESENKVEVVSEFEECELTESPELLDNEGPCS 705
Query: 659 FHGSDSISKENEIENVGGLEDRNRRNECSFLDINQETRHSCQRDANDDTFSNVYVQEIME 718
H S+ IS + EI N G LED+ RRN D+NQE HS R+A D TFSN+ V+E +E
Sbjct: 706 PHHSELISMDKEIYNSGCLEDKKRRNASGSWDVNQEVEHSYWREATDSTFSNINVKETLE 765
Query: 719 DILDHVHDDEEIYERNVKDSELDGNGTVQDAQASEDEFKGATH-LEDSERERKDNAVPVE 777
DI+DH+H DEEI+ERN K S+L+GN +QDA A E++ +GATH +E++E ERKDN V +E
Sbjct: 766 DIVDHIHHDEEIHERNAKASDLNGNVRLQDAHACENDLEGATHPMEENESERKDNKV-LE 824
Query: 778 VMRVTQTDPNYEETRAGVAVNATETSSSHDFDETMKLHRTQIADTIIENDETLEVT---- 833
V+ TQTD YEE R + N +E+SSS++ DET KL++TQ+++T+ ENDET EVT
Sbjct: 825 VIIETQTDLIYEEIREEESGNTSESSSSYEPDETEKLNKTQVSNTVNENDETHEVTPEFY 884
Query: 834 ----LDDIMIASKASFQHQEENDCNLSMLVEETTPESVEVCKDTKE-------------- 875
DDIM+ S AS Q QE+ + PESV+V D E
Sbjct: 885 SCDLQDDIMVTSNASVQRQEKYE----------EPESVQVTNDLCEKHAGQTSDFDEGAP 934
Query: 876 ---------------ATV---ASNIGEPD-MKAWHNEDQFFEKAENDRNPPVLVDETT-E 915
T+ ++N+GE D MK N+DQ EKAE+D + +L++ETT E
Sbjct: 935 LLSETVYQMNSTFETVTIDDDSTNVGETDMMKVRQNQDQCLEKAESDCDLVMLLEETTPE 994
Query: 916 FVEIWEDAKENTVATNMGETDLKVMQNQDQCLGKAENDCNPAVPXXXXXXXXXXXXXDAM 975
+EI DAKE+ V
Sbjct: 995 SIEICMDAKEHRV----------------------------------------------- 1007
Query: 976 ETRFASDEEIDEKRSYSSSEEILFDKKDKIDSSQTPAI-SELQSSPYKKEEVK--SMTME 1032
SDEEI++ RS SS E +SQ P E++S P K +E S+T E
Sbjct: 1008 ----VSDEEIEDNRSTSSCE-----------ASQIPFKEEEVKSIPSKIKESHQTSVTKE 1052
Query: 1033 EKEAIGKSQKAELEKGRRKKIDEAXXXXXXXXXXXLXXXXXXXXXXXXXXXXXXXXXXXX 1092
KEA GKSQK E+++ KKIDE L
Sbjct: 1053 VKEANGKSQKVEVDRELLKKIDEV--KNREREKEKLAVERAIREARERAFADARERAALE 1110
Query: 1093 XXXXXXXXXNIPDGRERVGKISSQANEKTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1152
NI +GRER+ K +SQANEKTP
Sbjct: 1111 RVAAEARQKNILNGRERL-KTTSQANEKTPAEKTAMEAKLKAERAAVERATAEARARALE 1169
Query: 1153 XXXXXXXXXXXXNKSDKSFAEKYFGSSRDNVKKQNFQSKSFSYGGRDSTDAFDGANGDSA 1212
NKSDKS EKY G+SR N KQN SKSFSYG RDST FDGAN DSA
Sbjct: 1170 RALSEKAAYDAKNKSDKSVPEKYVGASRSNGTKQNAHSKSFSYGVRDSTGVFDGANADSA 1229
Query: 1213 QRCKARSERHQRIGERVAKALEEKNMRDRLVQKEQEERNRVAEVLDADVKRWSAGKTGNL 1272
QRCKARSERHQRIGERVAKAL EK+MRDRLVQKEQEER+RVAE LDADVKRWS+GK GNL
Sbjct: 1230 QRCKARSERHQRIGERVAKALAEKSMRDRLVQKEQEERHRVAEALDADVKRWSSGKAGNL 1289
Query: 1273 RALLSTLQYV 1282
RALLSTLQY+
Sbjct: 1290 RALLSTLQYI 1299
>Medtr8g077150.1 | chaperone DnaJ-domain protein, putative | HC |
chr8:32789758-32784205 | 20130731
Length = 1466
Score = 112 bits (281), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/113 (54%), Positives = 79/113 (69%), Gaps = 8/113 (7%)
Query: 1177 GSSRDNVKKQNFQSKSFSYGGR-----DSTDAFDGAN--GDSAQRCKARSERHQRIGERV 1229
GSS D + Q F++ S + G R + +F G + G+SAQRC+AR ER +R +R
Sbjct: 1259 GSSSDMLDSQ-FRNFSSATGSRYPYSVNGASSFSGRSEEGESAQRCRARLERCRRTADRA 1317
Query: 1230 AKALEEKNMRDRLVQKEQEERNRVAEVLDADVKRWSAGKTGNLRALLSTLQYV 1282
AKALEEKNMRD QKEQ ER ++AE LD +V+RWS+GK GNLRALLSTLQY+
Sbjct: 1318 AKALEEKNMRDLQAQKEQAERTKLAETLDTEVRRWSSGKEGNLRALLSTLQYI 1370
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 84/194 (43%), Gaps = 27/194 (13%)
Query: 10 LSKKL-SNGYGVSGRSAYEGVFAAPIKHRAPSFASPLGDYREIFGA-GSGACSSIPILEL 67
L KKL SNG S Y+ V+ P K S + DY EIF + +G SSIP+L+L
Sbjct: 19 LPKKLTSNG------SLYDDVYGGPPKFTGSSISPRFEDYGEIFASFHAGRSSSIPVLDL 72
Query: 68 P--DLNEMRAAMDDVSRSKLDYSKXXXXXXXXXXAVPLEDLVAQTKVAEDSFTSRAPARS 125
P D E+ + D R+ DY++ EDL + E+ +P +
Sbjct: 73 PAVDAGEI---LFDFRRNAFDYAEVFGGSGGLDFWSSHEDLFREGDSDEEDDEVWSPEET 129
Query: 126 KVKS---GNQSYQEDRTDCSKEIPAASQSSNDAKRINMSYHQVSQGSQNGTS-AKTHIAQ 181
S GN Y + QS + N+SY++V+ S TS K H Q
Sbjct: 130 DSFSGDLGNFGYNQ----------GVFQSVDGNTEFNISYNKVNGTSNEDTSKGKAHATQ 179
Query: 182 VHAVPAYTCLSEEV 195
+HAVP T + +E
Sbjct: 180 LHAVPGVTRVVDET 193
>Medtr8g494210.1 | auxilin-like protein | HC | chr8:39416695-39425898
| 20130731
Length = 913
Score = 110 bits (275), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 55/88 (62%), Positives = 64/88 (72%)
Query: 1195 YGGRDSTDAFDGANGDSAQRCKARSERHQRIGERVAKALEEKNMRDRLVQKEQEERNRVA 1254
+G S+ F G+S +R KAR ERHQR ERVAKAL EKN RD Q+EQ ER+R+
Sbjct: 756 FGAAPSSGEFQEVEGESEERRKARLERHQRSQERVAKALAEKNQRDLQTQREQAERSRLG 815
Query: 1255 EVLDADVKRWSAGKTGNLRALLSTLQYV 1282
E LD ++KRWSAGK GNLRALLSTLQYV
Sbjct: 816 ETLDFEIKRWSAGKEGNLRALLSTLQYV 843
>Medtr8g077150.2 | chaperone DnaJ-domain protein, putative | HC |
chr8:32789758-32783308 | 20130731
Length = 1441
Score = 110 bits (274), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/132 (46%), Positives = 87/132 (65%), Gaps = 17/132 (12%)
Query: 1168 DKSFAEKYFGSSRDNVKK----------QNFQSKSFSYGGR-----DSTDAFDGAN--GD 1210
++S ++K+ SSR++ ++ F++ S + G R + +F G + G+
Sbjct: 1241 ERSVSDKFGISSRNDGRQGSSSLQDMLDSQFRNFSSATGSRYPYSVNGASSFSGRSEEGE 1300
Query: 1211 SAQRCKARSERHQRIGERVAKALEEKNMRDRLVQKEQEERNRVAEVLDADVKRWSAGKTG 1270
SAQRC+AR ER +R +R AKALEEKNMRD QKEQ ER ++AE LD +V+RWS+GK G
Sbjct: 1301 SAQRCRARLERCRRTADRAAKALEEKNMRDLQAQKEQAERTKLAETLDTEVRRWSSGKEG 1360
Query: 1271 NLRALLSTLQYV 1282
NLRALLSTLQY+
Sbjct: 1361 NLRALLSTLQYI 1372
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 84/194 (43%), Gaps = 27/194 (13%)
Query: 10 LSKKL-SNGYGVSGRSAYEGVFAAPIKHRAPSFASPLGDYREIFGA-GSGACSSIPILEL 67
L KKL SNG S Y+ V+ P K S + DY EIF + +G SSIP+L+L
Sbjct: 19 LPKKLTSNG------SLYDDVYGGPPKFTGSSISPRFEDYGEIFASFHAGRSSSIPVLDL 72
Query: 68 P--DLNEMRAAMDDVSRSKLDYSKXXXXXXXXXXAVPLEDLVAQTKVAEDSFTSRAPARS 125
P D E+ + D R+ DY++ EDL + E+ +P +
Sbjct: 73 PAVDAGEI---LFDFRRNAFDYAEVFGGSGGLDFWSSHEDLFREGDSDEEDDEVWSPEET 129
Query: 126 KVKS---GNQSYQEDRTDCSKEIPAASQSSNDAKRINMSYHQVSQGSQNGTS-AKTHIAQ 181
S GN Y + QS + N+SY++V+ S TS K H Q
Sbjct: 130 DSFSGDLGNFGYNQ----------GVFQSVDGNTEFNISYNKVNGTSNEDTSKGKAHATQ 179
Query: 182 VHAVPAYTCLSEEV 195
+HAVP T + +E
Sbjct: 180 LHAVPGVTRVVDET 193
>Medtr3g096790.2 | DnaJ domain protein | HC | chr3:44297240-44304262 |
20130731
Length = 672
Score = 107 bits (266), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 63/88 (71%)
Query: 1195 YGGRDSTDAFDGANGDSAQRCKARSERHQRIGERVAKALEEKNMRDRLVQKEQEERNRVA 1254
+G S F G+S +R KAR ER QR ER AKAL EKN RD Q+EQ+ER+R+A
Sbjct: 515 FGASPSAGEFQEVEGESEERRKARLERLQRAQERAAKALAEKNQRDLRTQREQDERHRLA 574
Query: 1255 EVLDADVKRWSAGKTGNLRALLSTLQYV 1282
E LD +VKRW+AGK GNLRALLSTLQYV
Sbjct: 575 ETLDFEVKRWAAGKEGNLRALLSTLQYV 602
>Medtr3g096790.1 | DnaJ domain protein | HC | chr3:44297240-44304262 |
20130731
Length = 735
Score = 106 bits (265), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 63/88 (71%)
Query: 1195 YGGRDSTDAFDGANGDSAQRCKARSERHQRIGERVAKALEEKNMRDRLVQKEQEERNRVA 1254
+G S F G+S +R KAR ER QR ER AKAL EKN RD Q+EQ+ER+R+A
Sbjct: 578 FGASPSAGEFQEVEGESEERRKARLERLQRAQERAAKALAEKNQRDLRTQREQDERHRLA 637
Query: 1255 EVLDADVKRWSAGKTGNLRALLSTLQYV 1282
E LD +VKRW+AGK GNLRALLSTLQYV
Sbjct: 638 ETLDFEVKRWAAGKEGNLRALLSTLQYV 665
>Medtr3g088495.1 | DnaJ domain protein | HC | chr3:40226149-40220895 |
20130731
Length = 521
Score = 82.0 bits (201), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 49/69 (71%)
Query: 1214 RCKARSERHQRIGERVAKALEEKNMRDRLVQKEQEERNRVAEVLDADVKRWSAGKTGNLR 1273
R KAR RHQR ER KA+ + N RD + EQEER R+A+ +D +KRW+AGK GN+R
Sbjct: 383 RRKARLGRHQRTQERALKAVADMNQRDLQSKLEQEERRRIADTVDVQIKRWAAGKEGNMR 442
Query: 1274 ALLSTLQYV 1282
ALLS+LQ V
Sbjct: 443 ALLSSLQNV 451
>Medtr3g088495.3 | DnaJ domain protein | HC | chr3:40226149-40222189 |
20130731
Length = 485
Score = 80.9 bits (198), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 48/67 (71%)
Query: 1214 RCKARSERHQRIGERVAKALEEKNMRDRLVQKEQEERNRVAEVLDADVKRWSAGKTGNLR 1273
R KAR RHQR ER KA+ + N RD + EQEER R+A+ +D +KRW+AGK GN+R
Sbjct: 383 RRKARLGRHQRTQERALKAVADMNQRDLQSKLEQEERRRIADTVDVQIKRWAAGKEGNMR 442
Query: 1274 ALLSTLQ 1280
ALLS+LQ
Sbjct: 443 ALLSSLQ 449
>Medtr3g088495.2 | DnaJ domain protein | HC | chr3:40226149-40220895 |
20130731
Length = 482
Score = 80.9 bits (198), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 48/67 (71%)
Query: 1214 RCKARSERHQRIGERVAKALEEKNMRDRLVQKEQEERNRVAEVLDADVKRWSAGKTGNLR 1273
R KAR RHQR ER KA+ + N RD + EQEER R+A+ +D +KRW+AGK GN+R
Sbjct: 383 RRKARLGRHQRTQERALKAVADMNQRDLQSKLEQEERRRIADTVDVQIKRWAAGKEGNMR 442
Query: 1274 ALLSTLQ 1280
ALLS+LQ
Sbjct: 443 ALLSSLQ 449