Miyakogusa Predicted Gene

Lj5g3v0107110.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0107110.1 Non Characterized Hit- tr|K3XVK5|K3XVK5_SETIT
Uncharacterized protein OS=Setaria italica GN=Si005963,32.99,3e-18,
,CUFF.52544.1
         (233 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g022350.1 | ubiquitin-protein ligase, putative | HC | chr1...   293   1e-79
Medtr8g077205.1 | ubiquitin-protein ligase | HC | chr8:32840095-...   146   2e-35
Medtr5g020570.2 | ubiquitin-protein ligase | HC | chr5:7873356-7...   144   5e-35
Medtr5g020570.1 | ubiquitin-protein ligase | HC | chr5:7872415-7...   143   1e-34
Medtr8g080280.1 | plant U-box protein | HC | chr8:34513929-34508...   105   3e-23
Medtr8g080280.2 | plant U-box protein | HC | chr8:34513519-34508...   105   3e-23
Medtr3g085610.1 | plant U-box protein | HC | chr3:38705951-38710...   104   9e-23
Medtr8g077205.2 | ubiquitin-protein ligase | HC | chr8:32839279-...    60   1e-09

>Medtr1g022350.1 | ubiquitin-protein ligase, putative | HC |
           chr1:7076378-7077932 | 20130731
          Length = 229

 Score =  293 bits (749), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 146/201 (72%), Positives = 173/201 (86%), Gaps = 5/201 (2%)

Query: 2   MMTKNGATTLQITIPSYCEVKVYRSLCIELHGFIGRILHLLLDIESARPNCALAMQALCS 61
           M+T N A      I S CEVKV+RS+CIEL+GFI RILH++L IES+RPNCALA+QALCS
Sbjct: 1   MLTNNIAA-----ITSCCEVKVHRSICIELNGFIDRILHIILAIESSRPNCALAIQALCS 55

Query: 62  LHFTLDKAKSVIKHCSESSQLYLVITSNKILSRCEKIRSAFELYLAQIQNAVPIPLAAEI 121
           LHFTLDKAKSVIK CS SS+LYL ITS+KILSRCEK+R++FELYL QIQN VPIPLAAEI
Sbjct: 56  LHFTLDKAKSVIKICSGSSKLYLAITSHKILSRCEKLRNSFELYLTQIQNTVPIPLAAEI 115

Query: 122 SAILRDLRDTEFSLEFAEEEARKVVLSMFEKNFPDSVSMENAELEAIQIATLRLNIKSSS 181
            +IL+DLRD EFSLEF E+EAR+V+LS+ EK FPDS SMENAE+EAI+I  LRL++KSSS
Sbjct: 116 CSILKDLRDAEFSLEFEEDEARQVLLSLLEKEFPDSASMENAEVEAIKIVALRLDMKSSS 175

Query: 182 HLLVEKATLKRQLKNVNGTNQ 202
            +LVEK++LKRQL+ VN TNQ
Sbjct: 176 SILVEKSSLKRQLEKVNKTNQ 196


>Medtr8g077205.1 | ubiquitin-protein ligase | HC |
           chr8:32840095-32836136 | 20130731
          Length = 760

 Score =  146 bits (369), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 80/191 (41%), Positives = 124/191 (64%), Gaps = 3/191 (1%)

Query: 14  TIPSYCEVKVYRSLCIELHGFIGRILHLLLDIESARPNCALAMQALCSLHFTLDKAKSVI 73
           T+P     KV+R LC EL   + R+L +   IE ARP  +  + AL  L  T+DKAK ++
Sbjct: 11  TLPDPRSFKVHRRLCTELKKLVDRVLRIFPQIEEARPRSSSGIPALVLLTSTVDKAKQLL 70

Query: 74  KHCSESSQLYLVITSNKILSRCEKIRSAFELYLAQIQNAVPIPLAAEISAILRDLRDTEF 133
           ++CS+SS LYL IT   ILS+C+K R + E  L QIQ+ VP+ LAAEIS I+ DLR   F
Sbjct: 71  QNCSDSSVLYLAITGESILSKCQKSRKSLEKSLVQIQDIVPVMLAAEISRIVDDLRRVTF 130

Query: 134 SLEFAEEEARKVVLSMFEKN--FPDSVSMENAELEAIQIATLRLNIKSSSHLLVEKATLK 191
            L+ AEEEA +V+  + ++     D+ S EN++++++Q A  RLNI S++ +++E+ ++K
Sbjct: 131 VLDSAEEEAGRVMRELLQQGPSTADNDSKENSDVKSLQFAAARLNITSATSIVIERRSIK 190

Query: 192 RQLKNVNGTNQ 202
           + L+ + G N+
Sbjct: 191 KLLQKL-GQNE 200


>Medtr5g020570.2 | ubiquitin-protein ligase | HC |
           chr5:7873356-7877255 | 20130731
          Length = 782

 Score =  144 bits (364), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 78/202 (38%), Positives = 125/202 (61%), Gaps = 3/202 (1%)

Query: 1   MMMTKNGATTLQITIPSYCEVKVYRSLCIELHGFIGRILHLLLDIESARPNCALAMQALC 60
           ++M  N    ++ T P+    +V+  +CIEL   +  I+ +  DIE ARP C+  +++LC
Sbjct: 14  LLMRTNSGEIVE-TFPNTLSFQVHSKICIELMKIVDSIMRIFPDIEEARPRCSSGIESLC 72

Query: 61  SLHFTLDKAKSVIKHCSESSQLYLVITSNKILSRCEKIRSAFELYLAQIQNAVPIPLAAE 120
            L+ +++KAK +++HCSE S+LYL +T   +LSRC+K + + E  L  IQ  VP+ LA E
Sbjct: 73  FLNNSIEKAKLLLQHCSECSKLYLAVTGETVLSRCQKAKKSLEQSLIPIQGMVPVMLAVE 132

Query: 121 ISAILRDLRDTEFSLEFAEEEARKVVLSMFEKNFPDSVSMENAELEAIQIATLRLNIKSS 180
           +S I+ DL    F L+FAEEEA +VV  +  +    S S+++ E++A+Q A  RLNI S 
Sbjct: 133 VSRIIDDLEYATFVLDFAEEEAGRVVRELLHQG-STSDSVDDFEVKALQFAAPRLNITSQ 191

Query: 181 SHLLVEKATLKRQLKNVNGTNQ 202
             +L+E+ ++K+ L  V G N 
Sbjct: 192 KAILIERRSIKKFLDKV-GPND 212


>Medtr5g020570.1 | ubiquitin-protein ligase | HC |
           chr5:7872415-7877255 | 20130731
          Length = 767

 Score =  143 bits (361), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 76/189 (40%), Positives = 119/189 (62%), Gaps = 2/189 (1%)

Query: 14  TIPSYCEVKVYRSLCIELHGFIGRILHLLLDIESARPNCALAMQALCSLHFTLDKAKSVI 73
           T P+    +V+  +CIEL   +  I+ +  DIE ARP C+  +++LC L+ +++KAK ++
Sbjct: 11  TFPNTLSFQVHSKICIELMKIVDSIMRIFPDIEEARPRCSSGIESLCFLNNSIEKAKLLL 70

Query: 74  KHCSESSQLYLVITSNKILSRCEKIRSAFELYLAQIQNAVPIPLAAEISAILRDLRDTEF 133
           +HCSE S+LYL +T   +LSRC+K + + E  L  IQ  VP+ LA E+S I+ DL    F
Sbjct: 71  QHCSECSKLYLAVTGETVLSRCQKAKKSLEQSLIPIQGMVPVMLAVEVSRIIDDLEYATF 130

Query: 134 SLEFAEEEARKVVLSMFEKNFPDSVSMENAELEAIQIATLRLNIKSSSHLLVEKATLKRQ 193
            L+FAEEEA +VV  +  +    S S+++ E++A+Q A  RLNI S   +L+E+ ++K+ 
Sbjct: 131 VLDFAEEEAGRVVRELLHQG-STSDSVDDFEVKALQFAAPRLNITSQKAILIERRSIKKF 189

Query: 194 LKNVNGTNQ 202
           L  V G N 
Sbjct: 190 LDKV-GPND 197


>Medtr8g080280.1 | plant U-box protein | HC | chr8:34513929-34508871
           | 20130731
          Length = 767

 Score =  105 bits (263), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 59/175 (33%), Positives = 100/175 (57%), Gaps = 4/175 (2%)

Query: 20  EVKVYRSLCIELHGFIGRILHLLLDIESARPNCALAMQALCSLHFTLDKAKSVIKHCSES 79
           + K++  +C  L     ++L +   +E+ARP     +QALCSLH  L+KAK+V+ HCS  
Sbjct: 17  DAKLHGQMCKALSVIYCKVLSIFPSLEAARPRSKTGIQALCSLHVALEKAKNVLHHCSVC 76

Query: 80  SQLYLVITSNKILSRCEKIRSAFELYLAQIQNAVPIPLAAEISAILRDLRDTEFSLEFAE 139
           S+LYL +T + +L + EK + A E  L ++++ VP  +  ++  I+ +  D EF+L+  E
Sbjct: 77  SKLYLAVTGDSVLLKFEKAKCALEDSLRRVEDIVPQSIGCQVQEIVNEFADVEFALDPLE 136

Query: 140 EEARKVVLSMFE--KNFPDSVSMENAELEAIQIATLRLNIKSSSHLLVEKATLKR 192
           ++    ++++ +  K F D    E+ ELE+   A  RL I SS   L E+  LK+
Sbjct: 137 KQVGDDLIALLQQGKKFDD--DGESYELESFHQAATRLGITSSRVALAERRALKK 189


>Medtr8g080280.2 | plant U-box protein | HC | chr8:34513519-34508871
           | 20130731
          Length = 767

 Score =  105 bits (263), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 59/175 (33%), Positives = 100/175 (57%), Gaps = 4/175 (2%)

Query: 20  EVKVYRSLCIELHGFIGRILHLLLDIESARPNCALAMQALCSLHFTLDKAKSVIKHCSES 79
           + K++  +C  L     ++L +   +E+ARP     +QALCSLH  L+KAK+V+ HCS  
Sbjct: 17  DAKLHGQMCKALSVIYCKVLSIFPSLEAARPRSKTGIQALCSLHVALEKAKNVLHHCSVC 76

Query: 80  SQLYLVITSNKILSRCEKIRSAFELYLAQIQNAVPIPLAAEISAILRDLRDTEFSLEFAE 139
           S+LYL +T + +L + EK + A E  L ++++ VP  +  ++  I+ +  D EF+L+  E
Sbjct: 77  SKLYLAVTGDSVLLKFEKAKCALEDSLRRVEDIVPQSIGCQVQEIVNEFADVEFALDPLE 136

Query: 140 EEARKVVLSMFE--KNFPDSVSMENAELEAIQIATLRLNIKSSSHLLVEKATLKR 192
           ++    ++++ +  K F D    E+ ELE+   A  RL I SS   L E+  LK+
Sbjct: 137 KQVGDDLIALLQQGKKFDD--DGESYELESFHQAATRLGITSSRVALAERRALKK 189


>Medtr3g085610.1 | plant U-box protein | HC | chr3:38705951-38710797
           | 20130731
          Length = 766

 Score =  104 bits (259), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 57/173 (32%), Positives = 101/173 (58%)

Query: 20  EVKVYRSLCIELHGFIGRILHLLLDIESARPNCALAMQALCSLHFTLDKAKSVIKHCSES 79
           + K++  +C  L     ++L L   +E+ARP     +QALCSLH  L+KAK+V+KHCSE 
Sbjct: 16  DAKLHAEMCRSLSAIYCKVLSLFPSLEAARPRSKSGIQALCSLHVALEKAKNVLKHCSEC 75

Query: 80  SQLYLVITSNKILSRCEKIRSAFELYLAQIQNAVPIPLAAEISAILRDLRDTEFSLEFAE 139
           S+LYL IT + +L + EK + A    L  +++ V   +  +I  I+ ++    F+L+ +E
Sbjct: 76  SKLYLAITGDSVLLKFEKAKCALVDSLKLVEDIVSQSIGYQIDEIVNEIAGMVFALDPSE 135

Query: 140 EEARKVVLSMFEKNFPDSVSMENAELEAIQIATLRLNIKSSSHLLVEKATLKR 192
           ++    ++++ +++   + S +++ELE   +A  RL I SS   L E+  LK+
Sbjct: 136 KQVGDDLIALLQQDRKFNNSNDSSELECFHMAATRLGITSSRAALTERRALKK 188


>Medtr8g077205.2 | ubiquitin-protein ligase | HC |
           chr8:32839279-32836136 | 20130731
          Length = 648

 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 34/88 (38%), Positives = 60/88 (68%), Gaps = 3/88 (3%)

Query: 117 LAAEISAILRDLRDTEFSLEFAEEEARKVVLSMFEKN--FPDSVSMENAELEAIQIATLR 174
           LAAEIS I+ DLR   F L+ AEEEA +V+  + ++     D+ S EN++++++Q A  R
Sbjct: 2   LAAEISRIVDDLRRVTFVLDSAEEEAGRVMRELLQQGPSTADNDSKENSDVKSLQFAAAR 61

Query: 175 LNIKSSSHLLVEKATLKRQLKNVNGTNQ 202
           LNI S++ +++E+ ++K+ L+ + G N+
Sbjct: 62  LNITSATSIVIERRSIKKLLQKL-GQNE 88