Miyakogusa Predicted Gene

Lj5g3v0104720.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0104720.1 Non Characterized Hit- tr|I1M8C6|I1M8C6_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,81.82,0,Flavoproteins,NULL; Radical SAM enzymes,NULL;
Radical_SAM,Radical SAM; Wyosine_form,tRNA wybutosine-,CUFF.52521.1
         (726 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g022225.1 | tRNA wybutosine-synthesizing-like protein | HC...   499   e-141
Medtr1g022235.1 | flavodoxin family protein | HC | chr1:6960192-...   484   e-136
Medtr1g102950.3 | NADPH-dependent diflavin oxidoreductase ATR3-l...    56   2e-07
Medtr1g102950.4 | NADPH-dependent diflavin oxidoreductase ATR3-l...    56   2e-07
Medtr1g102950.1 | NADPH-dependent diflavin oxidoreductase ATR3-l...    56   2e-07
Medtr1g102950.2 | NADPH-dependent diflavin oxidoreductase ATR3-l...    56   2e-07
Medtr1g102950.7 | NADPH-dependent diflavin oxidoreductase ATR3-l...    56   2e-07
Medtr1g102950.5 | NADPH-dependent diflavin oxidoreductase ATR3-l...    56   2e-07
Medtr1g102950.6 | NADPH-dependent diflavin oxidoreductase ATR3-l...    56   2e-07
Medtr7g406970.1 | NADPH-dependent diflavin oxidoreductase ATR3-l...    54   8e-07

>Medtr1g022225.1 | tRNA wybutosine-synthesizing-like protein | HC |
           chr1:6957574-6955942 | 20130731
          Length = 256

 Score =  499 bits (1285), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 233/250 (93%), Positives = 242/250 (96%)

Query: 474 LSPRHCALSLVGEPIMYPEINALVDELHKKRISTFLVTNAQFPDKIKSLKPITQLYVSVD 533
           ++PRHCALSLVGEPIMYPEIN LVDELHK+RISTFLVTNAQFPDKIK LKPITQLYVSVD
Sbjct: 1   MTPRHCALSLVGEPIMYPEINTLVDELHKRRISTFLVTNAQFPDKIKLLKPITQLYVSVD 60

Query: 534 AATKDSLKAIDRPLFGDFWERFIDSLTALKEKHQRTVYRLTLVKGWNTEEVDAYSKFFSM 593
           A TKDSLKAIDRPLFGDFWERFIDSLTALKEKHQRTVYRLTLVKGWN EE+DAY K FS+
Sbjct: 61  AGTKDSLKAIDRPLFGDFWERFIDSLTALKEKHQRTVYRLTLVKGWNAEEIDAYYKLFSI 120

Query: 594 GEPDFIEIKGVTYCGSTATSKLTMENVPWHADVKAFSEALALKSQGEYEVACEHVHSCCV 653
           GEPDFIEIKGVTYCGSTATSKLTMENVPWHADVKAFSEAL+LKSQGEYEVACEHVHSCC+
Sbjct: 121 GEPDFIEIKGVTYCGSTATSKLTMENVPWHADVKAFSEALSLKSQGEYEVACEHVHSCCI 180

Query: 654 LLAKTKKFKIDGQWYTWIDYEKFHDLVASGETFDSKDYMAVTPSWAVYGSEEGGFDPGQL 713
           LLAKTKKFKIDGQWYTWIDY+KFHDLVASG TFDSKDYMA TPSWAVYG+EEGGFDPGQL
Sbjct: 181 LLAKTKKFKIDGQWYTWIDYDKFHDLVASGSTFDSKDYMAATPSWAVYGAEEGGFDPGQL 240

Query: 714 RYRKERHHKS 723
           RYRKERHHKS
Sbjct: 241 RYRKERHHKS 250


>Medtr1g022235.1 | flavodoxin family protein | HC |
           chr1:6960192-6963496 | 20130731
          Length = 510

 Score =  484 bits (1246), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 245/401 (61%), Positives = 272/401 (67%), Gaps = 3/401 (0%)

Query: 92  LSSLPARLTLVALFSATTFYCXXXXXXXXXXXXXXXXXXXXXXXXXXXFLSQTGTSKTLA 151
            SS+PARLTL+ALFSATTFY                            F+SQT TSKTLA
Sbjct: 3   FSSVPARLTLLALFSATTFYFFYKSRRLRNLKQLTLNSQNPNTNPKILFISQTNTSKTLA 62

Query: 152 QRLHSFLASNGVVFELLDARSYEPEDLPKETLLLLVASTWEDGKPPPESRFFANWLAESA 211
             LH FL SN + F+++D R+YEPEDLPKETLLL+VASTWEDGKPPPE +FFA+WLAES+
Sbjct: 63  NHLHRFLTSNNLAFDIIDGRNYEPEDLPKETLLLIVASTWEDGKPPPEYKFFADWLAESS 122

Query: 212 EDFRVGSLLLSRLRFAVFGVGSGAYGDSFNAVARDLVKRMRELGAAXXXXXXXXXXXXXX 271
           EDFRVGSL+LS+ RFAVFGVGSG YGD+FNAV +++VKRM+ LG                
Sbjct: 123 EDFRVGSLILSKCRFAVFGVGSGGYGDNFNAVGKEIVKRMKALGGNEMIPLGEGDVNGGE 182

Query: 272 XXXXXXRWCAXXXXXXXXXXXXX--XXXXXXXXXXXXXXXXXXXXXXXXXPDIVDLEDIA 329
                 +WC                                          +IVDLEDIA
Sbjct: 183 VDEVFEKWCGKVVGMLKGVDDGGGDLENGEEESGALSSDEEESDEEEEAESEIVDLEDIA 242

Query: 330 GKAPSRKSGAKVEETNGKLNGKKEMVTPVIRANLVKQGYKIIGSHSGVKICRWTKSQLRG 389
           GKAPSRK  A V+E+NG+LNGKKEMVTPVIRANLVKQGYKIIGSHSGVKICRWTKSQLRG
Sbjct: 243 GKAPSRKLVATVKESNGRLNGKKEMVTPVIRANLVKQGYKIIGSHSGVKICRWTKSQLRG 302

Query: 390 RGGCYKHSFYGIESHRCMEATPSLACANKCVFCWRHHTNPVAKSWQWEMDDPIEIVNSAL 449
           RGGCYKHSFYGIESHRCMEATPSLACANKCVFCWRHHTNPVAKSW WEMDDPIEIVNSA+
Sbjct: 303 RGGCYKHSFYGIESHRCMEATPSLACANKCVFCWRHHTNPVAKSWVWEMDDPIEIVNSAI 362

Query: 450 DQHRNMVKQMKGVPGVTLERLNEGLSPRHCALSLVGEPIMY 490
           DQH NM+KQMKGVPG T+   N G   R      VG    Y
Sbjct: 363 DQHTNMIKQMKGVPGRTVAIFN-GCQTRISNNRYVGNAQNY 402


>Medtr1g102950.3 | NADPH-dependent diflavin oxidoreductase ATR3-like
           protein | HC | chr1:46545713-46554792 | 20130731
          Length = 620

 Score = 55.8 bits (133), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 5/117 (4%)

Query: 140 FLSQTGTSKTLAQRLHSFLASNGVVFELLDARSYEPEDLPKETLLLLVASTWEDGKPPPE 199
           + +QTG +   A+RL            LL    YEP  LP+E  ++ V ST   G  P  
Sbjct: 17  YATQTGNALDAAERLAREAERRACPINLLSLHQYEPNLLPQEEAVVFVVSTTGQGDSPDS 76

Query: 200 SRFFANWLAESAEDFRVGSLLLSRLRFAVFGVGSGAYGDSFNAVARDLVKRMRELGA 256
            + F  +L + +    +    L  + + VFG+G   Y   +N VA+ L KR+++LG 
Sbjct: 77  MKVFWRFLLQRS----LSQHWLKGVHYTVFGLGDSGY-QKYNFVAKKLDKRLKDLGG 128


>Medtr1g102950.4 | NADPH-dependent diflavin oxidoreductase ATR3-like
           protein | HC | chr1:46545713-46554792 | 20130731
          Length = 620

 Score = 55.8 bits (133), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 5/117 (4%)

Query: 140 FLSQTGTSKTLAQRLHSFLASNGVVFELLDARSYEPEDLPKETLLLLVASTWEDGKPPPE 199
           + +QTG +   A+RL            LL    YEP  LP+E  ++ V ST   G  P  
Sbjct: 17  YATQTGNALDAAERLAREAERRACPINLLSLHQYEPNLLPQEEAVVFVVSTTGQGDSPDS 76

Query: 200 SRFFANWLAESAEDFRVGSLLLSRLRFAVFGVGSGAYGDSFNAVARDLVKRMRELGA 256
            + F  +L + +    +    L  + + VFG+G   Y   +N VA+ L KR+++LG 
Sbjct: 77  MKVFWRFLLQRS----LSQHWLKGVHYTVFGLGDSGY-QKYNFVAKKLDKRLKDLGG 128


>Medtr1g102950.1 | NADPH-dependent diflavin oxidoreductase ATR3-like
           protein | HC | chr1:46545784-46554762 | 20130731
          Length = 620

 Score = 55.8 bits (133), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 5/117 (4%)

Query: 140 FLSQTGTSKTLAQRLHSFLASNGVVFELLDARSYEPEDLPKETLLLLVASTWEDGKPPPE 199
           + +QTG +   A+RL            LL    YEP  LP+E  ++ V ST   G  P  
Sbjct: 17  YATQTGNALDAAERLAREAERRACPINLLSLHQYEPNLLPQEEAVVFVVSTTGQGDSPDS 76

Query: 200 SRFFANWLAESAEDFRVGSLLLSRLRFAVFGVGSGAYGDSFNAVARDLVKRMRELGA 256
            + F  +L + +    +    L  + + VFG+G   Y   +N VA+ L KR+++LG 
Sbjct: 77  MKVFWRFLLQRS----LSQHWLKGVHYTVFGLGDSGY-QKYNFVAKKLDKRLKDLGG 128


>Medtr1g102950.2 | NADPH-dependent diflavin oxidoreductase ATR3-like
           protein | HC | chr1:46545713-46554792 | 20130731
          Length = 620

 Score = 55.8 bits (133), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 5/117 (4%)

Query: 140 FLSQTGTSKTLAQRLHSFLASNGVVFELLDARSYEPEDLPKETLLLLVASTWEDGKPPPE 199
           + +QTG +   A+RL            LL    YEP  LP+E  ++ V ST   G  P  
Sbjct: 17  YATQTGNALDAAERLAREAERRACPINLLSLHQYEPNLLPQEEAVVFVVSTTGQGDSPDS 76

Query: 200 SRFFANWLAESAEDFRVGSLLLSRLRFAVFGVGSGAYGDSFNAVARDLVKRMRELGA 256
            + F  +L + +    +    L  + + VFG+G   Y   +N VA+ L KR+++LG 
Sbjct: 77  MKVFWRFLLQRS----LSQHWLKGVHYTVFGLGDSGY-QKYNFVAKKLDKRLKDLGG 128


>Medtr1g102950.7 | NADPH-dependent diflavin oxidoreductase ATR3-like
           protein | HC | chr1:46545713-46554792 | 20130731
          Length = 620

 Score = 55.8 bits (133), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 5/117 (4%)

Query: 140 FLSQTGTSKTLAQRLHSFLASNGVVFELLDARSYEPEDLPKETLLLLVASTWEDGKPPPE 199
           + +QTG +   A+RL            LL    YEP  LP+E  ++ V ST   G  P  
Sbjct: 17  YATQTGNALDAAERLAREAERRACPINLLSLHQYEPNLLPQEEAVVFVVSTTGQGDSPDS 76

Query: 200 SRFFANWLAESAEDFRVGSLLLSRLRFAVFGVGSGAYGDSFNAVARDLVKRMRELGA 256
            + F  +L + +    +    L  + + VFG+G   Y   +N VA+ L KR+++LG 
Sbjct: 77  MKVFWRFLLQRS----LSQHWLKGVHYTVFGLGDSGY-QKYNFVAKKLDKRLKDLGG 128


>Medtr1g102950.5 | NADPH-dependent diflavin oxidoreductase ATR3-like
           protein | HC | chr1:46545713-46554792 | 20130731
          Length = 620

 Score = 55.8 bits (133), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 5/117 (4%)

Query: 140 FLSQTGTSKTLAQRLHSFLASNGVVFELLDARSYEPEDLPKETLLLLVASTWEDGKPPPE 199
           + +QTG +   A+RL            LL    YEP  LP+E  ++ V ST   G  P  
Sbjct: 17  YATQTGNALDAAERLAREAERRACPINLLSLHQYEPNLLPQEEAVVFVVSTTGQGDSPDS 76

Query: 200 SRFFANWLAESAEDFRVGSLLLSRLRFAVFGVGSGAYGDSFNAVARDLVKRMRELGA 256
            + F  +L + +    +    L  + + VFG+G   Y   +N VA+ L KR+++LG 
Sbjct: 77  MKVFWRFLLQRS----LSQHWLKGVHYTVFGLGDSGY-QKYNFVAKKLDKRLKDLGG 128


>Medtr1g102950.6 | NADPH-dependent diflavin oxidoreductase ATR3-like
           protein | HC | chr1:46546395-46554792 | 20130731
          Length = 620

 Score = 55.8 bits (133), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 5/117 (4%)

Query: 140 FLSQTGTSKTLAQRLHSFLASNGVVFELLDARSYEPEDLPKETLLLLVASTWEDGKPPPE 199
           + +QTG +   A+RL            LL    YEP  LP+E  ++ V ST   G  P  
Sbjct: 17  YATQTGNALDAAERLAREAERRACPINLLSLHQYEPNLLPQEEAVVFVVSTTGQGDSPDS 76

Query: 200 SRFFANWLAESAEDFRVGSLLLSRLRFAVFGVGSGAYGDSFNAVARDLVKRMRELGA 256
            + F  +L + +    +    L  + + VFG+G   Y   +N VA+ L KR+++LG 
Sbjct: 77  MKVFWRFLLQRS----LSQHWLKGVHYTVFGLGDSGY-QKYNFVAKKLDKRLKDLGG 128


>Medtr7g406970.1 | NADPH-dependent diflavin oxidoreductase ATR3-like
           protein | HC | chr7:1024141-1030865 | 20130731
          Length = 625

 Score = 53.5 bits (127), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 55/118 (46%), Gaps = 5/118 (4%)

Query: 140 FLSQTGTSKTLAQRLHSFLASNGVVFELLDARSYEPEDLPKETLLLLVASTWEDGKPPPE 199
           + +QTG +   ++RL            LL    Y+P  LP+E  ++ V ST   G  P  
Sbjct: 15  YATQTGNALDASERLAREAERRACPINLLSLHQYDPNLLPQEEAVVFVVSTTGQGDTPDS 74

Query: 200 SRFFANWLAESAEDFRVGSLLLSRLRFAVFGVGSGAYGDSFNAVARDLVKRMRELGAA 257
            + F  +L + +    +    L  + + VFG+G   Y   +N VA+ L KR+++LG  
Sbjct: 75  MKVFWRFLLQRS----LSQHWLKGVHYTVFGLGDSGY-QKYNFVAKKLDKRLKDLGGT 127