Miyakogusa Predicted Gene

Lj5g3v0088440.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0088440.1 Non Characterized Hit- tr|I1LZF8|I1LZF8_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,63.44,3e-16,PSK,Phytosulfokine; seg,NULL,CUFF.52506.1
         (92 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g061120.1 | phytosulfokine precursor protein | HC | chr1:2...    85   1e-17
Medtr1g061120.2 | phytosulfokine precursor protein | HC | chr1:2...    77   4e-15
Medtr2g084855.2 | phytosulfokine precursor protein | HC | chr2:3...    53   6e-08
Medtr2g084855.1 | phytosulfokine precursor protein | HC | chr2:3...    53   7e-08

>Medtr1g061120.1 | phytosulfokine precursor protein | HC |
          chr1:26664590-26665366 | 20130731
          Length = 93

 Score = 85.1 bits (209), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 42/69 (60%), Positives = 49/69 (71%), Gaps = 1/69 (1%)

Query: 25 VAPEGPRKGEK-EVKVDDNAITLSYAESKDDMEELKGSEACYEEDQECSSRRMIAEAHLD 83
          V P G R GEK E+K+  N I  S  E K+DME+L G E CYE+D+EC SRRM  E HLD
Sbjct: 25 VPPNGSRHGEKKELKIIGNTIAQSSTEVKEDMEQLMGLEECYEKDEECLSRRMNMETHLD 84

Query: 84 YIYTQHYKP 92
          YIYTQH+KP
Sbjct: 85 YIYTQHHKP 93


>Medtr1g061120.2 | phytosulfokine precursor protein | HC |
          chr1:26664590-26665366 | 20130731
          Length = 71

 Score = 76.6 bits (187), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 36/58 (62%), Positives = 43/58 (74%)

Query: 35 KEVKVDDNAITLSYAESKDDMEELKGSEACYEEDQECSSRRMIAEAHLDYIYTQHYKP 92
          KE+K+  N I  S  E K+DME+L G E CYE+D+EC SRRM  E HLDYIYTQH+KP
Sbjct: 14 KELKIIGNTIAQSSTEVKEDMEQLMGLEECYEKDEECLSRRMNMETHLDYIYTQHHKP 71


>Medtr2g084855.2 | phytosulfokine precursor protein | HC |
          chr2:36003423-36002105 | 20130731
          Length = 87

 Score = 53.1 bits (126), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 23/40 (57%), Positives = 29/40 (72%)

Query: 53 DDMEELKGSEACYEEDQECSSRRMIAEAHLDYIYTQHYKP 92
          D+  ++ G E C  ED++C  RRM  EAHLDYIYTQH+KP
Sbjct: 48 DESLKMLGMEKCNIEDEDCMQRRMTLEAHLDYIYTQHHKP 87


>Medtr2g084855.1 | phytosulfokine precursor protein | HC |
          chr2:36003423-36002105 | 20130731
          Length = 91

 Score = 52.8 bits (125), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 30/65 (46%), Positives = 38/65 (58%), Gaps = 5/65 (7%)

Query: 28 EGPRKGEKEVKVDDNAITLSYAESKDDMEELKGSEACYEEDQECSSRRMIAEAHLDYIYT 87
          +GP   + EV  D   + L   ES     ++ G E C  ED++C  RRM  EAHLDYIYT
Sbjct: 32 QGPNT-KIEVSGDSFVLDLEGDESL----KMLGMEKCNIEDEDCMQRRMTLEAHLDYIYT 86

Query: 88 QHYKP 92
          QH+KP
Sbjct: 87 QHHKP 91