Miyakogusa Predicted Gene

Lj4g3v3117400.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v3117400.1 Non Characterized Hit- tr|F6I7H2|F6I7H2_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,39.77,3e-19,seg,NULL; DUF760,Protein of unknown function DUF760;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL,CUFF.52461.1
         (171 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g071465.2 | plant/T1N15-5 protein | HC | chr6:26484510-264...   240   6e-64
Medtr6g071465.1 | plant/T1N15-5 protein | HC | chr6:26484510-264...   240   6e-64
Medtr5g028020.1 | plant/F3C3-6 protein | HC | chr5:11708806-1171...   140   5e-34
Medtr8g012420.1 | DUF760 family protein | HC | chr8:3542307-3545...    91   6e-19
Medtr7g053530.1 | DUF760 family protein | LC | chr7:18865635-188...    59   3e-09

>Medtr6g071465.2 | plant/T1N15-5 protein | HC |
           chr6:26484510-26489227 | 20130731
          Length = 418

 Score =  240 bits (612), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 118/171 (69%), Positives = 135/171 (78%)

Query: 1   MYGYFLKRVDQRFQLEKTMKVLPNAAEDSSVHKPVKDDARPGNGENTSQVMSHPELSPWL 60
           MYGYFLKRV QRFQLEKT+K LP+AAE++++ + ++D+ R    E  SQVMSHPE+  WL
Sbjct: 248 MYGYFLKRVVQRFQLEKTIKNLPDAAEENTISQTLEDETRNAGLEFPSQVMSHPEVPAWL 307

Query: 61  XXXXXXXXXXXXIKPTRLRNYVMSFDGDTLQRYATIRSKEAVSIIEKHTEALFGRPEFAI 120
                       I  +RLR+Y+MSFD +TLQRYATIRSKEAVSIIE HTEALFGRPE  I
Sbjct: 308 ESGISSGANDQEITVSRLRSYMMSFDIETLQRYATIRSKEAVSIIENHTEALFGRPEIVI 367

Query: 121 TPEGAIDSSKDENIKISFGGLKRLVLEAVTFGSFLWDVESYVESSYHFVLN 171
           TPEG I+SSKDE IKI  GGLKRLVLEAVTFGSFLWDVESYV+S YHFVLN
Sbjct: 368 TPEGKINSSKDEIIKIRIGGLKRLVLEAVTFGSFLWDVESYVDSRYHFVLN 418


>Medtr6g071465.1 | plant/T1N15-5 protein | HC |
           chr6:26484510-26489227 | 20130731
          Length = 418

 Score =  240 bits (612), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 118/171 (69%), Positives = 135/171 (78%)

Query: 1   MYGYFLKRVDQRFQLEKTMKVLPNAAEDSSVHKPVKDDARPGNGENTSQVMSHPELSPWL 60
           MYGYFLKRV QRFQLEKT+K LP+AAE++++ + ++D+ R    E  SQVMSHPE+  WL
Sbjct: 248 MYGYFLKRVVQRFQLEKTIKNLPDAAEENTISQTLEDETRNAGLEFPSQVMSHPEVPAWL 307

Query: 61  XXXXXXXXXXXXIKPTRLRNYVMSFDGDTLQRYATIRSKEAVSIIEKHTEALFGRPEFAI 120
                       I  +RLR+Y+MSFD +TLQRYATIRSKEAVSIIE HTEALFGRPE  I
Sbjct: 308 ESGISSGANDQEITVSRLRSYMMSFDIETLQRYATIRSKEAVSIIENHTEALFGRPEIVI 367

Query: 121 TPEGAIDSSKDENIKISFGGLKRLVLEAVTFGSFLWDVESYVESSYHFVLN 171
           TPEG I+SSKDE IKI  GGLKRLVLEAVTFGSFLWDVESYV+S YHFVLN
Sbjct: 368 TPEGKINSSKDEIIKIRIGGLKRLVLEAVTFGSFLWDVESYVDSRYHFVLN 418


>Medtr5g028020.1 | plant/F3C3-6 protein | HC |
           chr5:11708806-11712504 | 20130731
          Length = 410

 Score =  140 bits (354), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 76/171 (44%), Positives = 108/171 (63%), Gaps = 6/171 (3%)

Query: 1   MYGYFLKRVDQRFQLEKTMKVLPNAAEDSSVHKPVKDDARPGNG--ENTSQVMSHPELSP 58
           MYGYFLKRVD+RFQLE+++  LP   +D        D+  P N   ++ S +  +P+   
Sbjct: 242 MYGYFLKRVDERFQLERSVGTLP---QDLGKENISFDEPSPPNKLWDSDSLIRIYPDDEG 298

Query: 59  WLXXXXXXXXXXXXIKPTRLRNYVMSFDGDTLQRYATIRSKEAVSIIEKHTEALFGRPEF 118
           +              K + LR YV   D + LQR AT+RSKEA+S+IEK T+ALFGRP+ 
Sbjct: 299 YYEMDDMNTGDGEG-KSSGLRAYVTQLDTEALQRLATVRSKEAISLIEKQTQALFGRPDI 357

Query: 119 AITPEGAIDSSKDENIKISFGGLKRLVLEAVTFGSFLWDVESYVESSYHFV 169
            ++ +G+I+++ DE + ++F GL  LVLE+V FGSFLWD E+YVES Y F+
Sbjct: 358 RLSGDGSIETTNDEVLSLTFSGLTMLVLESVAFGSFLWDEENYVESKYPFL 408


>Medtr8g012420.1 | DUF760 family protein | HC | chr8:3542307-3545267
           | 20130731
          Length = 372

 Score = 90.9 bits (224), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 61/178 (34%), Positives = 87/178 (48%), Gaps = 37/178 (20%)

Query: 1   MYGYFLKRVDQRFQLEKTMKVLPNAAEDSSVHKPVKDDARPGNGENTSQVMSHPELSPWL 60
           +YGYFLK V  R+ LE+ + +                D  PG+  N    +S  ++ P+ 
Sbjct: 215 LYGYFLKSVSLRYHLERNLNL-------------ANHDVHPGHRTN----LSFKDMCPY- 256

Query: 61  XXXXXXXXXXXXIKPT------------RLRNYVMSFDGDTLQRYATIRSKEAVSIIEKH 108
                       +KP              L+ YVM F   +LQR A +RSKEAV+++  +
Sbjct: 257 GFEDDIFGHLSNMKPIGQGLIRQEEEIEDLKCYVMRFHPGSLQRCAKLRSKEAVNLVRSY 316

Query: 109 TEALFGRPEFAITPEGAIDSSKDENIKISFGGLKRLVLEAVTFGSFLWDVESYVESSY 166
           + ALF    F      ++DS  D+ I  SF  LKRLVLEAV FGSFLW+ E Y+++ Y
Sbjct: 317 SSALFNSEGF-----DSVDS--DDVILTSFSSLKRLVLEAVAFGSFLWETEDYIDNVY 367


>Medtr7g053530.1 | DUF760 family protein | LC |
           chr7:18865635-18867605 | 20130731
          Length = 345

 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 71/174 (40%), Gaps = 45/174 (25%)

Query: 1   MYGYFLKRVDQRFQLEKTMKVLPNAAEDSSVHKPVKDDARPGNGENTSQVMSHPELSPWL 60
           +YGYFLK V  R++LEK               +    D     G  +  V    +     
Sbjct: 201 LYGYFLKSVSSRYELEK---------------RQFLSDHDLNTGHGSKNVFLGKQ----- 240

Query: 61  XXXXXXXXXXXXIKPTRLRNYVMSF-------DGDTLQRYATIRSKEAVSIIEKHTEALF 113
                       I+   L++YV  F       DG        +R KEA+ +IE HT+ALF
Sbjct: 241 -----------EIENGTLKDYVKGFKRPRLVLDG------CKLRYKEALQLIESHTQALF 283

Query: 114 -GRPEFAITPEGAIDSSKDENIKISFGGLKRLVLEAVTFGSFLWDVESYVESSY 166
               E  +      D   D  I+ SF  +KRL+ E + FGSFLW  E +++  Y
Sbjct: 284 EHNKECGLNEFDDDDEEDDRFIEASFSSIKRLLWEGLAFGSFLWMAEDFIDGIY 337