Miyakogusa Predicted Gene
- Lj4g3v3115120.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v3115120.1 Non Characterized Hit- tr|I1KQL8|I1KQL8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.6841 PE=,71.42,0,L
domain-like,NULL; coiled-coil,NULL; LRR_4,Leucine rich repeat 4;
LRR_8,NULL; no description,NULL; ,gene.g58190.t1.1
(1004 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr8g107440.1 | outer arm dynein light chain 1 | HC | chr8:454... 1296 0.0
Medtr8g107440.2 | outer arm dynein light chain 1 | HC | chr8:454... 994 0.0
Medtr8g107440.3 | outer arm dynein light chain 1 | HC | chr8:454... 600 e-171
Medtr5g064040.1 | outer arm dynein light chain 1 | LC | chr5:265... 60 1e-08
Medtr3g074720.1 | outer arm dynein light chain 1 | HC | chr3:337... 56 2e-07
>Medtr8g107440.1 | outer arm dynein light chain 1 | HC |
chr8:45414531-45424768 | 20130731
Length = 1090
Score = 1296 bits (3353), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 677/1091 (62%), Positives = 759/1091 (69%), Gaps = 95/1091 (8%)
Query: 2 MAIVTGDRYLEKLVHFVDNQAGPLIEGAFVLKLNPAGLHYVQXXXXXXXXXXXXXXXXPV 61
MAIVTGDRYLEKLV FV++QAGPLIEG+FVLKLNPAGLHYVQ PV
Sbjct: 1 MAIVTGDRYLEKLVKFVEDQAGPLIEGSFVLKLNPAGLHYVQSRLESLHELESLLLGAPV 60
Query: 62 DYLRAYVSDLGDHRALEQLRRIXXXXXXXXXXXXXXXXXXDPTPLSFLPFGRLKLLELRG 121
DYLRAYVSDLGDHRALEQLRRI DPTPLSFLPFGRLK+LELRG
Sbjct: 61 DYLRAYVSDLGDHRALEQLRRILRLLTSLKVVSVLQPPVRDPTPLSFLPFGRLKVLELRG 120
Query: 122 CDLSTSAAKGLLELRHTLEKLICHNSTDALRHVFASRITEIKDSPQWNRLSFVSCACNAL 181
CDLSTSAAKGLL+LRHTLEK+ICHNSTDALRHVFASRITEIKDSPQWNRLSFVSCACN L
Sbjct: 121 CDLSTSAAKGLLDLRHTLEKIICHNSTDALRHVFASRITEIKDSPQWNRLSFVSCACNGL 180
Query: 182 LLMDESLQLLPAVETLDLSRNKFAKLDNLHKCTKLKHLDLGFNHLRTFAPFTQPQVSCHI 241
+LMDESL LLP+VETLDLSRNKFAKLDNL CTKLKHLDLGFNHLRT APFTQ VSCHI
Sbjct: 181 VLMDESLHLLPSVETLDLSRNKFAKLDNLKHCTKLKHLDLGFNHLRTLAPFTQ--VSCHI 238
Query: 242 VKLVLRNNALTTLHGIENLKSLEGLDVSYNMISNFSELEFLAGLPHLQSLWLEGNPLSCA 301
VKLVLRNNALTTL GIENLKSLEGLDVSYN+ISNFSELEFL GL +L+SLW+EGNPL CA
Sbjct: 239 VKLVLRNNALTTLRGIENLKSLEGLDVSYNIISNFSELEFLVGLLYLKSLWMEGNPLCCA 298
Query: 302 RWYRAHVFSFFTYPEK-------------------------------------------- 317
RWYRA VFSFF YPEK
Sbjct: 299 RWYRAQVFSFFAYPEKLKLDEKEINATDFWKRQIIIASMHKQPASFGIYVPAKDEAIVEG 358
Query: 318 -----RKVTRVASIENEEDIASICSNEDSVSCANENQSREDPDLTDDEAEIVDLINRVEH 372
RKV RVASIE+EE+I SICS+++S SC NE Q+ EDPDL DDEAEI DLIN+VEH
Sbjct: 359 GNNRRRKVCRVASIESEEEITSICSDQESQSCVNEIQNNEDPDLFDDEAEIDDLINKVEH 418
Query: 373 MKKERSILWLREFKDWMGFTSDTLVETRKEGRATSRHQKRNYIKNKTHQEQHGEVSRYAL 432
MKKERSILWLREF+DWM +SD VET +GR TS HQK N KN T++EQHGEVSRYA
Sbjct: 419 MKKERSILWLREFRDWMNISSDKSVETWIKGRGTSHHQKENLPKNHTNKEQHGEVSRYAS 478
Query: 433 DSVLKSGDESSMNLLESDSSFADMSSGFHREHYFDYRXXXXXXXXXXXXXXXVVDADRLN 492
DSVL SGDESSMN+LESDSSFADMS+ F R+ YFDYR VD +
Sbjct: 479 DSVLASGDESSMNILESDSSFADMSAWFRRQQYFDYRGSLGNASGASLSDSGGVDVECFK 538
Query: 493 PFXXXXXXXXXXXXKNSYPDTIALQGAQRKAENATNSPLTTITDISGSRSSSMCPTSPPH 552
F KNS+ DT+A QGA R N SPLTTI DI+GS+SSS CPTSPPH
Sbjct: 539 SFLLQGINSSLSQSKNSHSDTVAPQGAHRMTGNVNVSPLTTIDDINGSQSSSTCPTSPPH 598
Query: 553 FQEDLLHRRHHLVEEILQLXXXXXXXXXXXXXXXCSEIDYGEFEPSEPKVDNFPCKNSVN 612
FQ+DLLHRRH+LVEEILQL CS++D E EPS P VD P KN VN
Sbjct: 599 FQKDLLHRRHNLVEEILQLSADSFSVASSDSNTSCSDVDCSESEPSVPIVDCHPYKNHVN 658
Query: 613 GSVDEHISENKQKEKLSNPRQRIIRAGENGICLIGPSCDQTSKLYSVNFVAGADDGESAL 672
GSVD IS N+ +E + +PRQ I AG+N IC G S DQT K S++F AGA G+S+L
Sbjct: 659 GSVDGLISPNQHEENICSPRQGSIHAGQNDICSFGSSSDQTCKQGSIDFAAGA--GDSSL 716
Query: 673 SAGEDSDLSENXXXXXXXXXXXXSIFEEISDGNACEHEQEQIRHGQFSDNLRQELDINGF 732
SA + +D SI EE + ++ HEQEQI GQ + N RQE ++ F
Sbjct: 717 SASQQTDFFGKKKIRKKAKKRVISILEEKVNISSGAHEQEQINQGQNTANSRQESAVDDF 776
Query: 733 TDFSRRDCFTTEDDNLVVTYFNTTIADSEASEVCSHCIRCNCVFQRETTYKEREVAVLMS 792
T+F R+C T E+++ +VTYFN+ IADSEA+EVC+HCIRCN + Q ET YKEREVAVL+S
Sbjct: 777 TEFRWRNCSTQENNDFIVTYFNSNIADSEANEVCNHCIRCNSILQMETNYKEREVAVLLS 836
Query: 793 SHKKLYVLLVNVASDGSGICLSVLSSHKMEEVCEVLVGIGXXXXXXXXXXXXXF------ 846
SHKKLYVLL+NVASDGSG LSVLS HKMEEV EVLVG+G +
Sbjct: 837 SHKKLYVLLINVASDGSGELLSVLSCHKMEEVREVLVGMGLQVLRVNFEGGETYLFVTSS 896
Query: 847 ------------------------------------DKQICGGSNLSIYQYAMVLICYNI 870
QICGGSN+SIYQYAMVL+C N
Sbjct: 897 IEMSRELLCTIQVFDSCRGNSRCSIRSLEQVQVELFGNQICGGSNVSIYQYAMVLVCCNH 956
Query: 871 GSEESWLSRSLFVIGGNVLLCVEDVKQLYSFSSDVSTSPYFTIDSCCTIAEITEMVIEVG 930
G+EESWLSRSLFVIGG VLLC+ED+KQLYSFSSD S SPY+ IDSCC+IA+ITEMVI G
Sbjct: 957 GNEESWLSRSLFVIGGYVLLCIEDIKQLYSFSSDASVSPYYRIDSCCSIADITEMVIVAG 1016
Query: 931 DSCCVTLGLTCPLTEVHPSIRMNLVAANHGNKAPGSLKLKLQWFSRDDLLKFVSLLKAIH 990
DSCCVTLGL C LTE +PS R+NLV +HGN+ PGSLKLKL+WFS+D+LLKFVSLLKA H
Sbjct: 1017 DSCCVTLGLKCSLTEFYPSTRLNLVTVSHGNRTPGSLKLKLRWFSKDNLLKFVSLLKAFH 1076
Query: 991 AEKAVSHLVVR 1001
AEK S LVVR
Sbjct: 1077 AEKVASPLVVR 1087
>Medtr8g107440.2 | outer arm dynein light chain 1 | HC |
chr8:45414491-45420186 | 20130731
Length = 845
Score = 994 bits (2571), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 521/849 (61%), Positives = 586/849 (69%), Gaps = 56/849 (6%)
Query: 2 MAIVTGDRYLEKLVHFVDNQAGPLIEGAFVLKLNPAGLHYVQXXXXXXXXXXXXXXXXPV 61
MAIVTGDRYLEKLV FV++QAGPLIEG+FVLKLNPAGLHYVQ PV
Sbjct: 1 MAIVTGDRYLEKLVKFVEDQAGPLIEGSFVLKLNPAGLHYVQSRLESLHELESLLLGAPV 60
Query: 62 DYLRAYVSDLGDHRALEQLRRIXXXXXXXXXXXXXXXXXXDPTPLSFLPFGRLKLLELRG 121
DYLRAYVSDLGDHRALEQLRRI DPTPLSFLPFGRLK+LELRG
Sbjct: 61 DYLRAYVSDLGDHRALEQLRRILRLLTSLKVVSVLQPPVRDPTPLSFLPFGRLKVLELRG 120
Query: 122 CDLSTSAAKGLLELRHTLEKLICHNSTDALRHVFASRITEIKDSPQWNRLSFVSCACNAL 181
CDLSTSAAKGLL+LRHTLEK+ICHNSTDALRHVFASRITEIKDSPQWNRLSFVSCACN L
Sbjct: 121 CDLSTSAAKGLLDLRHTLEKIICHNSTDALRHVFASRITEIKDSPQWNRLSFVSCACNGL 180
Query: 182 LLMDESLQLLPAVETLDLSRNKFAKLDNLHKCTKLKHLDLGFNHLRTFAPFTQPQVSCHI 241
+LMDESL LLP+VETLDLSRNKFAKLDNL CTKLKHLDLGFNHLRT APFT QVSCHI
Sbjct: 181 VLMDESLHLLPSVETLDLSRNKFAKLDNLKHCTKLKHLDLGFNHLRTLAPFT--QVSCHI 238
Query: 242 VKLVLRNNALTTLHGIENLKSLEGLDVSYNMISNFSELEFLAGLPHLQSLWLEGNPLSCA 301
VKLVLRNNALTTL GIENLKSLEGLDVSYN+ISNFSELEFL GL +L+SLW+EGNPL CA
Sbjct: 239 VKLVLRNNALTTLRGIENLKSLEGLDVSYNIISNFSELEFLVGLLYLKSLWMEGNPLCCA 298
Query: 302 RWYRAHVFSFFTYPEK-------------------------------------------- 317
RWYRA VFSFF YPEK
Sbjct: 299 RWYRAQVFSFFAYPEKLKLDEKEINATDFWKRQIIIASMHKQPASFGIYVPAKDEAIVEG 358
Query: 318 -----RKVTRVASIENEEDIASICSNEDSVSCANENQSREDPDLTDDEAEIVDLINRVEH 372
RKV RVASIE+EE+I SICS+++S SC NE Q+ EDPDL DDEAEI DLIN+VEH
Sbjct: 359 GNNRRRKVCRVASIESEEEITSICSDQESQSCVNEIQNNEDPDLFDDEAEIDDLINKVEH 418
Query: 373 MKKERSILWLREFKDWMGFTSDTLVETRKEGRATSRHQKRNYIKNKTHQEQHGEVSRYAL 432
MKKERSILWLREF+DWM +SD VET +GR TS HQK N KN T++EQHGEVSRYA
Sbjct: 419 MKKERSILWLREFRDWMNISSDKSVETWIKGRGTSHHQKENLPKNHTNKEQHGEVSRYAS 478
Query: 433 DSVLKSGDESSMNLLESDSSFADMSSGFHREHYFDYRXXXXXXXXXXXXXXXVVDADRLN 492
DSVL SGDESSMN+LESDSSFADMS+ F R+ YFDYR VD +
Sbjct: 479 DSVLASGDESSMNILESDSSFADMSAWFRRQQYFDYRGSLGNASGASLSDSGGVDVECFK 538
Query: 493 PFXXXXXXXXXXXXKNSYPDTIALQGAQRKAENATNSPLTTITDISGSRSSSMCPTSPPH 552
F KNS+ DT+A QGA R N SPLTTI DI+GS+SSS CPTSPPH
Sbjct: 539 SFLLQGINSSLSQSKNSHSDTVAPQGAHRMTGNVNVSPLTTIDDINGSQSSSTCPTSPPH 598
Query: 553 FQEDLLHRRHHLVEEILQLXXXXXXXXXXXXXXXCSEIDYGEFEPSEPKVDNFPCKNSVN 612
FQ+DLLHRRH+LVEEILQL CS++D E EPS P VD P KN VN
Sbjct: 599 FQKDLLHRRHNLVEEILQLSADSFSVASSDSNTSCSDVDCSESEPSVPIVDCHPYKNHVN 658
Query: 613 GSVDEHISENKQKEKLSNPRQRIIRAGENGICLIGPSCDQTSKLYSVNFVAGADDGESAL 672
GSVD IS N+ +E + +PRQ I AG+N IC G S DQT K S++F AGA G+S+L
Sbjct: 659 GSVDGLISPNQHEENICSPRQGSIHAGQNDICSFGSSSDQTCKQGSIDFAAGA--GDSSL 716
Query: 673 SAGEDSDLSENXXXXXXXXXXXXSIFEEISDGNACEHEQEQIRHGQFSDNLRQELDINGF 732
SA + +D SI EE + ++ HEQEQI GQ + N RQE ++ F
Sbjct: 717 SASQQTDFFGKKKIRKKAKKRVISILEEKVNISSGAHEQEQINQGQNTANSRQESAVDDF 776
Query: 733 TDFSRRDCFTTEDDNLVVTYFNTTIADSEASEVCSHCIRCNCVFQRETTYKEREVAVLMS 792
T+F R+C T E+++ +VTYFN+ IADSEA+EVC+HCIRCN + Q ET YKE +
Sbjct: 777 TEFRWRNCSTQENNDFIVTYFNSNIADSEANEVCNHCIRCNSILQMETNYKESSA---FA 833
Query: 793 SHKKLYVLL 801
K LY +L
Sbjct: 834 KKKNLYNVL 842
>Medtr8g107440.3 | outer arm dynein light chain 1 | HC |
chr8:45414491-45424944 | 20130731
Length = 676
Score = 600 bits (1547), Expect = e-171, Method: Compositional matrix adjust.
Identities = 323/589 (54%), Positives = 378/589 (64%), Gaps = 51/589 (8%)
Query: 293 LEGNPLSCARWYRAHVFSFFTYPEK----------------------------------- 317
+EGNPL CARWYRA VFSFF YPEK
Sbjct: 1 MEGNPLCCARWYRAQVFSFFAYPEKLKLDEKEINATDFWKRQIIIASMHKQPASFGIYVP 60
Query: 318 --------------RKVTRVASIENEEDIASICSNEDSVSCANENQSREDPDLTDDEAEI 363
RKV RVASIE+EE+I SICS+++S SC NE Q+ EDPDL DDEAEI
Sbjct: 61 AKDEAIVEGGNNRRRKVCRVASIESEEEITSICSDQESQSCVNEIQNNEDPDLFDDEAEI 120
Query: 364 VDLINRVEHMKKERSILWLREFKDWMGFTSDTLVETRKEGRATSRHQKRNYIKNKTHQEQ 423
DLIN+VEHMKKERSILWLREF+DWM +SD VET +GR TS HQK N KN T++EQ
Sbjct: 121 DDLINKVEHMKKERSILWLREFRDWMNISSDKSVETWIKGRGTSHHQKENLPKNHTNKEQ 180
Query: 424 HGEVSRYALDSVLKSGDESSMNLLESDSSFADMSSGFHREHYFDYRXXXXXXXXXXXXXX 483
HGEVSRYA DSVL SGDESSMN+LESDSSFADMS+ F R+ YFDYR
Sbjct: 181 HGEVSRYASDSVLASGDESSMNILESDSSFADMSAWFRRQQYFDYRGSLGNASGASLSDS 240
Query: 484 XVVDADRLNPFXXXXXXXXXXXXKNSYPDTIALQGAQRKAENATNSPLTTITDISGSRSS 543
VD + F KNS+ DT+A QGA R N SPLTTI DI+GS+SS
Sbjct: 241 GGVDVECFKSFLLQGINSSLSQSKNSHSDTVAPQGAHRMTGNVNVSPLTTIDDINGSQSS 300
Query: 544 SMCPTSPPHFQEDLLHRRHHLVEEILQLXXXXXXXXXXXXXXXCSEIDYGEFEPSEPKVD 603
S CPTSPPHFQ+DLLHRRH+LVEEILQL CS++D E EPS P VD
Sbjct: 301 STCPTSPPHFQKDLLHRRHNLVEEILQLSADSFSVASSDSNTSCSDVDCSESEPSVPIVD 360
Query: 604 NFPCKNSVNGSVDEHISENKQKEKLSNPRQRIIRAGENGICLIGPSCDQTSKLYSVNFVA 663
P KN VNGSVD IS N+ +E + +PRQ I AG+N IC G S DQT K S++F A
Sbjct: 361 CHPYKNHVNGSVDGLISPNQHEENICSPRQGSIHAGQNDICSFGSSSDQTCKQGSIDFAA 420
Query: 664 GADDGESALSAGEDSDLSENXXXXXXXXXXXXSIFEEISDGNACEHEQEQIRHGQFSDNL 723
GA G+S+LSA + +D SI EE + ++ HEQEQI GQ + N
Sbjct: 421 GA--GDSSLSASQQTDFFGKKKIRKKAKKRVISILEEKVNISSGAHEQEQINQGQNTANS 478
Query: 724 RQELDINGFTDFSRRDCFTTEDDNLVVTYFNTTIADSEASEVCSHCIRCNCVFQRETTYK 783
RQE ++ FT+F R+C T E+++ +VTYFN+ IADSEA+EVC+HCIRCN + Q ET YK
Sbjct: 479 RQESAVDDFTEFRWRNCSTQENNDFIVTYFNSNIADSEANEVCNHCIRCNSILQMETNYK 538
Query: 784 EREVAVLMSSHKKLYVLLVNVASDGSGICLSVLSSHKMEEVCEVLVGIG 832
EREVAVL+SSHKKLYVLL+NVASDGSG LSVLS HKMEEV EVLVG+G
Sbjct: 539 EREVAVLLSSHKKLYVLLINVASDGSGELLSVLSCHKMEEVREVLVGMG 587
>Medtr5g064040.1 | outer arm dynein light chain 1 | LC |
chr5:26571860-26575618 | 20130731
Length = 642
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 81/155 (52%), Gaps = 6/155 (3%)
Query: 146 NSTDALRHVFASRITEIKDSPQWNRLSFVSCACNALLLMDESLQLLPAVETLDLSRNKFA 205
N ++ H+ I I ++ L V+ + N ++ + L +V+TL+LSRNK +
Sbjct: 405 NPASSVAHISGVGIKAIPVISHFSNLRSVNLSNNFIVTISPGC-LPKSVQTLNLSRNKIS 463
Query: 206 KLDNLHKCTKLKHLDLGFNHLRTFAPFTQPQVSCHIVK-LVLRNNALTTLHGIENLKSLE 264
++ L + T+L+ LDL +N + Q SC IVK L L +N ++ + G+ L L
Sbjct: 464 TIEGLKELTRLRVLDLSYNCISRIG---QGLSSCTIVKELYLADNKISDVEGLHRLFKLT 520
Query: 265 GLDVSYNMISNFSEL-EFLAGLPHLQSLWLEGNPL 298
LD+S+N I+ L + +A LQ+L L GN +
Sbjct: 521 VLDLSFNKITTTKALGQLVANYNSLQALNLLGNAI 555
>Medtr3g074720.1 | outer arm dynein light chain 1 | HC |
chr3:33762799-33767220 | 20130731
Length = 672
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 62/112 (55%), Gaps = 6/112 (5%)
Query: 190 LLP-AVETLDLSRNKFAKLDNLHKCTKLKHLDLGFNHLRTFAPFTQPQVSCHIVK-LVLR 247
LP + TL+LSRNK + ++ L + T+L+ LDL +N + Q SC +VK L L
Sbjct: 469 FLPKGLHTLNLSRNKISTIEGLRELTRLRVLDLSYNRISRIG---QGLSSCTLVKELYLA 525
Query: 248 NNALTTLHGIENLKSLEGLDVSYNMISNFSEL-EFLAGLPHLQSLWLEGNPL 298
N ++ + G+ L L LD+S+N I+ L + +A + +L L GNP+
Sbjct: 526 GNKISDVEGLHRLFKLTVLDLSFNKITTTKALRQLVANYNSVLALNLLGNPI 577