Miyakogusa Predicted Gene

Lj4g3v3114870.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v3114870.1 Non Characterized Hit- tr|I1KQK8|I1KQK8_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,35.53,6e-19,seg,NULL,NODE_85345_length_786_cov_7.073792.path2.1
         (245 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g107330.1 | nuclear localized protein, putative | HC | chr...   253   8e-68
Medtr8g107330.2 | nuclear localized protein, putative | HC | chr...   216   2e-56

>Medtr8g107330.1 | nuclear localized protein, putative | HC |
           chr8:45346874-45344406 | 20130731
          Length = 407

 Score =  253 bits (647), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 146/253 (57%), Positives = 168/253 (66%), Gaps = 11/253 (4%)

Query: 1   MTVTLKDPTGTVGASIHRKVFTESQFGKDITVGSVLLLQKVAVFSPSRSTCYLNITLPNI 60
           MTVTLKDPTG+VGASIHRKVFTE  F KDITVGSVLLLQKVAVFSP+ STCYLNITL NI
Sbjct: 158 MTVTLKDPTGSVGASIHRKVFTEGGFRKDITVGSVLLLQKVAVFSPNGSTCYLNITLSNI 217

Query: 61  LKVFSKDSGPPSGQVYPASSDNHTASGLGRHEKS----GSTFSLPQERTGGTM----TKS 112
           LKVFSKDSGPPS Q+    +     SG  R EKS     S  SLPQERT G +     +S
Sbjct: 218 LKVFSKDSGPPSQQISAIRTT--PISGAERQEKSWMPPSSVLSLPQERTQGILNNLRVES 275

Query: 113 SFRQEADVGKQWDEILVLTSSDSDNGTDRNKRTAMDRENLPLSEDSSRPVEVTHGSELEG 172
            FR+ A  GKQ DE LVL+    DNG D+N++T  DRENL L +D  RPVE   G +LE 
Sbjct: 276 RFREVAGNGKQRDENLVLSGCHFDNGGDQNQKTVSDRENLSLRQDIVRPVEAICGGDLES 335

Query: 173 EMEDQSNPPKLCEGNNLAGVAPGGIXXXXXXXXXXXXXXXIKNHLGSQKEIANPKGSIPY 232
           EMEDQ N P L +G++L G                     I+NH+ +Q EI NPK SIP 
Sbjct: 336 EMEDQQNHPNLGKGDSLVGNDQANSSSSNSAHISADQETGIENHMETQ-EIMNPKSSIPQ 394

Query: 233 WTEEQLDELLAFD 245
           WT+EQL+ELL+FD
Sbjct: 395 WTDEQLNELLSFD 407


>Medtr8g107330.2 | nuclear localized protein, putative | HC |
           chr8:45346874-45344406 | 20130731
          Length = 378

 Score =  216 bits (550), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 131/249 (52%), Positives = 151/249 (60%), Gaps = 32/249 (12%)

Query: 1   MTVTLKDPTGTVGASIHRKVFTESQFGKDITVGSVLLLQKVAVFSPSRSTCYLNITLPNI 60
           MTVTLKDPTG+VGASIHRKVFTE  F KDITVGSVLLLQKVAVFSP+ STCYLNITL NI
Sbjct: 158 MTVTLKDPTGSVGASIHRKVFTEGGFRKDITVGSVLLLQKVAVFSPNGSTCYLNITLSNI 217

Query: 61  LKVFSKDSGPPSGQVYPASSDNHTASGLGRHEKS----GSTFSLPQERTGGTMTKSSFRQ 116
           LKVFSKDSGPPS Q+  ++      SG  R EKS     S  SLPQERT G +  ++ R 
Sbjct: 218 LKVFSKDSGPPSQQI--SAIRTTPISGAERQEKSWMPPSSVLSLPQERTQGIL--NNLRV 273

Query: 117 EADVGKQWDEILVLTSSDSDNGTDRNKRTAMDRENLPLSEDSSRPVEVTHGSELEGEMED 176
           E+                         R   DRENL L +D  RPVE   G +LE EMED
Sbjct: 274 ESRF-----------------------REVADRENLSLRQDIVRPVEAICGGDLESEMED 310

Query: 177 QSNPPKLCEGNNLAGVAPGGIXXXXXXXXXXXXXXXIKNHLGSQKEIANPKGSIPYWTEE 236
           Q N P L +G++L G                     I+NH+ +Q EI NPK SIP WT+E
Sbjct: 311 QQNHPNLGKGDSLVGNDQANSSSSNSAHISADQETGIENHMETQ-EIMNPKSSIPQWTDE 369

Query: 237 QLDELLAFD 245
           QL+ELL+FD
Sbjct: 370 QLNELLSFD 378