Miyakogusa Predicted Gene
- Lj4g3v3114660.3
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v3114660.3 tr|C1FIP7|C1FIP7_MICSR Peptidyl-prolyl cis-trans
isomerase OS=Micromonas sp. (strain RCC299 / NOUM17,36,3e-18,seg,NULL;
FKBP-like,NULL; FKBP_PPIASE,Peptidyl-prolyl cis-trans isomerase,
FKBP-type, domain; no des,CUFF.52642.3
(250 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr8g107010.1 | FKBP-type peptidyl-prolyl cis-trans isomerase ... 375 e-104
Medtr1g061850.1 | FKBP-type peptidyl-prolyl cis-trans isomerase ... 64 2e-10
Medtr1g061080.1 | FKBP-type peptidyl-prolyl cis-trans isomerase ... 59 3e-09
Medtr8g006755.1 | FKBP-type peptidyl-prolyl cis-trans isomerase ... 53 2e-07
Medtr4g094785.1 | FKBP-type peptidyl-prolyl cis-trans isomerase ... 51 9e-07
Medtr7g006570.1 | FKBP-type peptidyl-prolyl cis-trans isomerase ... 48 8e-06
>Medtr8g107010.1 | FKBP-type peptidyl-prolyl cis-trans isomerase |
HC | chr8:45206393-45207788 | 20130731
Length = 256
Score = 375 bits (962), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/256 (75%), Positives = 205/256 (80%), Gaps = 6/256 (2%)
Query: 1 MATFFGSPPVFSLPLTRNXXXXXXXXXXXXXXXXXXXX------XXXXXXXXXVQGTAKA 54
MAT FGS +F LP TR VQ +AKA
Sbjct: 1 MATIFGSSSIFLLPNTRTSHHITSSSATPPPQQPQPSGPSSPQSTTNLNEDQSVQVSAKA 60
Query: 55 QPQNPIKPVTSSTKVDSTDWIATSLTRRFGLGAGLAWVGFLAFGVVSEQIKTRLEVSQQE 114
Q Q PIKPV SSTKVDSTDWIATSLTRRFGLGAGLAWVGFLAFGVVSEQIKTRLEVSQQE
Sbjct: 61 QQQIPIKPVVSSTKVDSTDWIATSLTRRFGLGAGLAWVGFLAFGVVSEQIKTRLEVSQQE 120
Query: 115 ANTRDVEKEEEVTLPNGIRYCELKVGGGASPRPGDLVVIDIMGKVESTGEVFVNTFEGDK 174
+NTR+VE+E+EV LPNGIRY ELK+GGG PR GDLVVIDIMGKVESTGEVFVNTFEGDK
Sbjct: 121 SNTRNVEEEKEVILPNGIRYYELKIGGGDMPRRGDLVVIDIMGKVESTGEVFVNTFEGDK 180
Query: 175 KPLALVMGSRPYSKGVCEGIEYVLKTMKAGGKRKVIVPPQLGFRENGADLGSGVQIPPLA 234
K LALVMGSRPYSKGVCEGIEYV+K+MKAGGKRKVIVPP+LGFRENGADLGSGV+IPPLA
Sbjct: 181 KALALVMGSRPYSKGVCEGIEYVIKSMKAGGKRKVIVPPELGFRENGADLGSGVEIPPLA 240
Query: 235 TLEYIVEVDKVSIAPA 250
TLEY+V+VDKVSIAPA
Sbjct: 241 TLEYVVQVDKVSIAPA 256
>Medtr1g061850.1 | FKBP-type peptidyl-prolyl cis-trans isomerase |
HC | chr1:27011727-27014868 | 20130731
Length = 257
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 94/198 (47%), Gaps = 33/198 (16%)
Query: 60 IKPVTSSTKVDSTDWIATSLTRRFGLGAGLAWVGFLAFGVVSEQIKTRLEVSQQEANTRD 119
++P++ S +++ + TSL F GV + + + S++
Sbjct: 75 VEPISMSLQIEGRRALLTSLLTTFA-------------GVYACDVAEAVSTSRRALRGAK 121
Query: 120 VEKEEEVTLPNGIRYCELKVGGGASPRPGDLVVIDIMGKVESTGEVFVNTFEGDKKPLAL 179
+ + + TLPNG++Y +LKVG GA G V I + K G F+ + +G
Sbjct: 122 IPESDFKTLPNGLKYYDLKVGDGAEAVKGSRVAIHYVAKWR--GITFMTSRQGMG----- 174
Query: 180 VMGSRPY-------SKG-VCEGIEYVLKTMKAGGKRKVIVPPQLGFRENGADLGSGVQIP 231
V G PY ++G V +G++ ++ M+ GG+R +IVPP+L + G +IP
Sbjct: 175 VGGGTPYGFDVGESARGNVLKGLDVGVEGMRVGGQRLLIVPPELAYGSRGVQ-----EIP 229
Query: 232 PLATLEYIVEVDKVSIAP 249
P AT+E +E+ + +P
Sbjct: 230 PNATIEMDIELLAIKQSP 247
>Medtr1g061080.1 | FKBP-type peptidyl-prolyl cis-trans isomerase |
HC | chr1:26643446-26642061 | 20130731
Length = 218
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 57/104 (54%), Gaps = 12/104 (11%)
Query: 128 LPN--GIRYCELKVGGGASPRPGDLVVIDIMGKVES-TGEVFVNTFE-----GDKKPLAL 179
LPN G++ EL VG G P+ GD V I G++ + G F +T++ GD P
Sbjct: 74 LPNSGGVKALELLVGSGEVPQDGDQVEIHYYGRLAAKQGWRFDSTYDHKDENGDPNPFVF 133
Query: 180 VMGSRPYSKGVCEGIEYVLKTMKAGGKRKVIVPPQLGFRENGAD 223
V+GS V GI+ +++MK GG R+V++PP LG++ +
Sbjct: 134 VLGS----GKVIAGIDVAVRSMKVGGIRRVVIPPSLGYQNTSQE 173
>Medtr8g006755.1 | FKBP-type peptidyl-prolyl cis-trans isomerase |
HC | chr8:920971-928573 | 20130731
Length = 470
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 6/91 (6%)
Query: 126 VTLPNGIRYCELKVGGGASPRPGDLVVIDIMGKVESTGEVFVNTFEGDKKPLALVMGSRP 185
+T +G+ Y + +VG G P+ G V +G ES + +G P + MG++
Sbjct: 345 ITRDSGLIYRDFEVGEGDCPKDGQQVTFHYVGYNESGRRIDSTYLQG--SPAKIRMGNKA 402
Query: 186 YSKGVCEGIEYVLKTMKAGGKRKVIVPPQLG 216
G EGI + M+AGGKR++I+PP LG
Sbjct: 403 LVPGFEEGI----RDMRAGGKRRIIIPPDLG 429
>Medtr4g094785.1 | FKBP-type peptidyl-prolyl cis-trans isomerase |
HC | chr4:38997044-38999561 | 20130731
Length = 240
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 60/116 (51%), Gaps = 5/116 (4%)
Query: 129 PNGIRYCELKVGGGASPRPGDLVVIDIMGKVESTGEVFVNTFEGDKKPLALVMGSRPYSK 188
P+G+ YC+ VG G G L+ +G++E+ G+VF +++ KPL +G K
Sbjct: 122 PSGLSYCDKVVGYGPQAVKGQLIKAHYVGRLEN-GKVFDSSYN-RGKPLTFRVGVGEVIK 179
Query: 189 GVCEGI--EYVLKTMKAGGKRKVIVPPQLGFRENGADL-GSGVQIPPLATLEYIVE 241
G GI + + M GGKR + +PP+ G+ GA G IPP A L + VE
Sbjct: 180 GWDVGILGDDGIPPMLTGGKRTLKLPPEFGYGSRGAGCKGGSCVIPPDAVLLFDVE 235
>Medtr7g006570.1 | FKBP-type peptidyl-prolyl cis-trans isomerase |
HC | chr7:752211-756734 | 20130731
Length = 240
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 55/111 (49%), Gaps = 13/111 (11%)
Query: 124 EEVTLPNGIRYCELKVGGGASPRPGDLVVIDIMG-KVESTGEVFV-------NTFEGDKK 175
+ V +G++Y +L+ G G P+ G+ VV+D G + G +F +FEGD K
Sbjct: 95 DYVETESGLQYKDLRPGNGPKPKKGETVVVDWDGYTIGYYGRIFEARNKTKGGSFEGDDK 154
Query: 176 PL-ALVMGSRPYSKGVCEGIEYVLKTMKAGGKRKVIVPPQLGFRENGADLG 225
+GS V E + M GG R++IVPP+LG+ E+ + G
Sbjct: 155 DFFKFKVGSHE----VIPAFEEAVAGMSLGGIRRIIVPPELGYPESDYNKG 201