Miyakogusa Predicted Gene

Lj4g3v3114570.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v3114570.1 Non Characterized Hit- tr|C5Y080|C5Y080_SORBI
Putative uncharacterized protein Sb04g030180
OS=Sorghu,32.71,4e-18,seg,NULL,
NODE_67477_length_1267_cov_62.516178.path2.1
         (335 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g106870.1 | transmembrane protein, putative | HC | chr8:45...   421   e-118
Medtr0110s0010.1 | transmembrane protein, putative | HC | scaffo...   354   9e-98
Medtr2g047975.1 | transmembrane protein, putative | HC | chr2:21...   182   5e-46
Medtr4g051000.1 | hypothetical protein | HC | chr4:18101244-1809...   178   7e-45
Medtr2g089530.1 | hypothetical protein | HC | chr2:37858887-3785...   178   7e-45

>Medtr8g106870.1 | transmembrane protein, putative | HC |
           chr8:45127493-45125425 | 20130731
          Length = 335

 Score =  421 bits (1082), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 226/328 (68%), Positives = 250/328 (76%), Gaps = 21/328 (6%)

Query: 1   MTLTLPPKSPFFKTILLLSTLLSCYV-----VALPDASASSAARPISTNPTS--QGTIPA 53
           MTLTLP     F T+LL+   + CY+     + +PDA+     +P++ NP+S  QGTIPA
Sbjct: 1   MTLTLPS----FNTLLLI-LFIPCYLSLPIPIPIPDAAT---VQPLTPNPSSSLQGTIPA 52

Query: 54  FPEQADSAGCPLSLSEDHYEGIKSACGN--NKHGGGDEKLHHSRCCPVLAAWLYSAYSAT 111
           FPEQAD A CPLSLS++H  GIK+AC +  NKH   D++LH SRCCP LAAWLYSAYSAT
Sbjct: 53  FPEQADVARCPLSLSDEHLNGIKNACSSKSNKHDAADDELHRSRCCPALAAWLYSAYSAT 112

Query: 112 ALGGLVHG-SPSYDMPLLPDDSETCESDLGKALKVRGIELVQPNETCDVVYCYCGIRLHP 170
           ALGG  HG + SYDMPLLPDDSETCESDLGKALKVRGIEL QPNETCDVVYCYCGIRLHP
Sbjct: 113 ALGGFEHGHTTSYDMPLLPDDSETCESDLGKALKVRGIELFQPNETCDVVYCYCGIRLHP 172

Query: 171 LSCPESFSVTP-SGNLVGDENVKRLERNCLSSSSN-VNDLPGLGGCXXXXXXXXXXXXXX 228
           LSC ESF +T  +GNLVGDE+VKRLERNCLSSSSN VN  P LGGC              
Sbjct: 173 LSCSESFKLTAHNGNLVGDESVKRLERNCLSSSSNHVNGFPALGGCSKCLHSLYSLRKKT 232

Query: 229 XXXXXXXEDRTTKIHNKDCELMGLTWLLNKNRTAYMHTVTVVLRALMLSTDGSDPQSCTL 288
                   DRTTKIHNKDCELMGLTWLL KNRT Y+HTVT VLRALMLS DGSDPQSCTL
Sbjct: 233 SNSSKSG-DRTTKIHNKDCELMGLTWLLAKNRTTYIHTVTWVLRALMLSPDGSDPQSCTL 291

Query: 289 NSDGMPLAVDSSEMYDQSSSAKLQGPIY 316
           NSDGMPLAVDSSEMYDQSSS  L+ PI+
Sbjct: 292 NSDGMPLAVDSSEMYDQSSSINLKVPIF 319


>Medtr0110s0010.1 | transmembrane protein, putative | HC |
           scaffold0110:3187-5549 | 20130731
          Length = 336

 Score =  354 bits (908), Expect = 9e-98,   Method: Compositional matrix adjust.
 Identities = 187/315 (59%), Positives = 220/315 (69%), Gaps = 10/315 (3%)

Query: 1   MTLTLPPKSPFFKTILLLSTLLSCYVVALPDASASSAARPISTNPTSQGTIPAFPEQADS 60
           M+L+LP   P+   + L       Y+      S SS   PI   PT+  TIP+F EQ+  
Sbjct: 1   MSLSLPLPLPYQMILFLYILFFPSYMSLTHPNSTSSTLNPIF--PTTL-TIPSFQEQSYV 57

Query: 61  AGCPLSLSEDHYEGIKSACGNNKHGGGDEKLHHSRCCPVLAAWLYSAYSATALGG----- 115
            GCPLSLS + + GI+SAC ++KHG  + KL  SRCCP+LAAWLYS+YS+TALG      
Sbjct: 58  KGCPLSLSNELFNGIESACSSSKHGS-NSKLDRSRCCPILAAWLYSSYSSTALGNHSSSS 116

Query: 116 LVHGSPSYDMPLLPDDSETCESDLGKALKVRGIELVQPNETCDVVYCYCGIRLHPLSCPE 175
                 S+DMPL+PDDSETC   L KALKVRGIEL++PNE+CD+VYCYCGIRLHP +CP+
Sbjct: 117 SSSSRSSFDMPLVPDDSETCVDGLEKALKVRGIELIKPNESCDLVYCYCGIRLHPFNCPD 176

Query: 176 SFSVTPSGNLVGDENVKRLERNCLSSSSNVNDLPGLGGCXXXXXXXXXXXXXXXXXXXXX 235
           +FSVT SG LVGD +V+RLE+NCLS   N N   GLGGC                     
Sbjct: 177 AFSVTKSGELVGDGSVRRLEKNCLSKKKNGNGFQGLGGC-SKCLNSLYLLNKKTSNLSKE 235

Query: 236 EDRTTKIHNKDCELMGLTWLLNKNRTAYMHTVTVVLRALMLSTDGSDPQSCTLNSDGMPL 295
           EDRTTKIHNKDCELMGLTWLL+KNRTAY+HTVT VLRAL+L+ DGS PQSCTLNSDGMPL
Sbjct: 236 EDRTTKIHNKDCELMGLTWLLSKNRTAYIHTVTNVLRALLLNKDGSKPQSCTLNSDGMPL 295

Query: 296 AVDSSEMYDQSSSAK 310
           AVDSSE YDQSSS K
Sbjct: 296 AVDSSEFYDQSSSTK 310


>Medtr2g047975.1 | transmembrane protein, putative | HC |
           chr2:21103008-21100608 | 20130731
          Length = 316

 Score =  182 bits (461), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 107/271 (39%), Positives = 147/271 (54%), Gaps = 33/271 (12%)

Query: 47  SQGTIPAFPEQADSAGCPLSLSEDHYEGIKSACGNNKHGGGDEKLHHSRCCPVLAAWLYS 106
           S  T+PAFP Q  +  C L LS + + G+K+ACG N        L  SRCCPVLAAWL++
Sbjct: 37  SSNTVPAFPVQTQTQICKLDLSNELFGGVKAACGKN--------LDRSRCCPVLAAWLFA 88

Query: 107 AYSATAL------GGLVHGSPS----YDMPLLPDDSETCESDLGKALKVRGIELVQPNET 156
           A++ +AL       G    +PS      +P++PDDS+ C + L  +L  R I + QPN T
Sbjct: 89  AHARSALEITPDGAGANASAPSTGEQQQLPMMPDDSQKCVNSLQDSLMSRNIRIPQPNAT 148

Query: 157 CDVVYCYCGIRLHP---LSCPESFSVTPSGNLVGDEN--VKRLERNCLSSSSNVNDLPGL 211
           CD + C+CGIRLH    LSC  +F+V+ S   +      V+ LE NC ++S         
Sbjct: 149 CDAILCFCGIRLHQISSLSCSAAFNVSGSHKNIATPTVAVRNLENNCRNASYQ------- 201

Query: 212 GGCXXXXXXXXXXXXXXXXXXXXXEDRTTKIHNKDCELMGLTWLLNKNRTAYMHTVTVVL 271
            GC                     E R  K+ N+DCELMGLTWLL KN+T Y+ TV+ VL
Sbjct: 202 -GCTKCLSALQKVKSYKNATKGASE-RVKKMFNRDCELMGLTWLLAKNKTTYIPTVSAVL 259

Query: 272 RALMLSTDGSDPQSCTLNSDGMPLAVDSSEM 302
           RA+M S    + + C+ + + MPLAVDS + 
Sbjct: 260 RAMMYSAHPHESK-CSPDQENMPLAVDSLQF 289


>Medtr4g051000.1 | hypothetical protein | HC |
           chr4:18101244-18099913 | 20130731
          Length = 301

 Score =  178 bits (451), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 109/288 (37%), Positives = 156/288 (54%), Gaps = 36/288 (12%)

Query: 43  TNPTSQGTIPAFPEQADSAGCPLSLSEDHYEGIKSACGNNKHGGGDEKLHHSRCCPVLAA 102
           +N +   T+P++P   +S  C L LS + + G+  ACGNN        L  SRCCPVLAA
Sbjct: 18  SNISHSNTLPSYPTPTESQICKLDLSNELFGGVNDACGNN--------LDRSRCCPVLAA 69

Query: 103 WLYSAYSATALGGLVHGSP---SYDMPLLPDDSETCESDLGKALKVRGIELVQPNETCDV 159
           WL++A++  AL   +   P   S D+P++PDDS+ C + L  +L+ R I +  PN +CD 
Sbjct: 70  WLFAAHARRALE--ISPPPRENSVDLPMMPDDSQKCVNSLQDSLRDRNIIIPTPNASCDA 127

Query: 160 VYCYCGIRLHPLS---CPESFSVTPSG---NLVGDEN------VKRLERNCLSSSSNVND 207
           + C+CGIRLH +S   CP +F+V+ S    N+ G         V+ LE+NC +SS     
Sbjct: 128 ILCFCGIRLHQISSLNCPNAFNVSVSTMVHNVSGSHKATPTAAVRDLEKNCRNSS----- 182

Query: 208 LPGLGGCXXXXXXXXXXXXXXXXXXXXXEDRTTKIHNKDCELMGLTWLLNKNRTAYMHTV 267
                GC                      DR  K++N+DC+LM LTWLL KN+T Y+ TV
Sbjct: 183 ---YAGC--TNCLSALQKLKVHKKDTKESDRERKMYNRDCQLMALTWLLGKNKTLYIPTV 237

Query: 268 TVVLRALMLSTDGSDPQSCTLNSDGMPLAVDSSEMYDQSSSAKLQGPI 315
           + VLRA+M S    D + C+ + + MPLAVDS +    SSS     P+
Sbjct: 238 SAVLRAVMYSAHPHDIK-CSPDQENMPLAVDSMQFDHTSSSEAPSSPL 284


>Medtr2g089530.1 | hypothetical protein | HC |
           chr2:37858887-37857342 | 20130731
          Length = 301

 Score =  178 bits (451), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 109/288 (37%), Positives = 156/288 (54%), Gaps = 36/288 (12%)

Query: 43  TNPTSQGTIPAFPEQADSAGCPLSLSEDHYEGIKSACGNNKHGGGDEKLHHSRCCPVLAA 102
           +N +   T+P++P   +S  C L LS + + G+  ACGNN        L  SRCCPVLAA
Sbjct: 18  SNISHSNTLPSYPTPTESQICKLDLSNELFGGVNDACGNN--------LDRSRCCPVLAA 69

Query: 103 WLYSAYSATALGGLVHGSP---SYDMPLLPDDSETCESDLGKALKVRGIELVQPNETCDV 159
           WL++A++  AL   +   P   S D+P++PDDS+ C + L  +L+ R I +  PN +CD 
Sbjct: 70  WLFAAHARRALE--ISPPPRENSVDLPMMPDDSQKCVNSLQDSLRDRNIIIPTPNASCDA 127

Query: 160 VYCYCGIRLHPLS---CPESFSVTPSG---NLVGDEN------VKRLERNCLSSSSNVND 207
           + C+CGIRLH +S   CP +F+V+ S    N+ G         V+ LE+NC +SS     
Sbjct: 128 ILCFCGIRLHQISSLNCPNAFNVSVSTMVHNVSGSHKATPTAAVRDLEKNCRNSS----- 182

Query: 208 LPGLGGCXXXXXXXXXXXXXXXXXXXXXEDRTTKIHNKDCELMGLTWLLNKNRTAYMHTV 267
                GC                      DR  K++N+DC+LM LTWLL KN+T Y+ TV
Sbjct: 183 ---YAGC--TNCLSALQKLKVHKKDTKESDRERKMYNRDCQLMALTWLLGKNKTLYIPTV 237

Query: 268 TVVLRALMLSTDGSDPQSCTLNSDGMPLAVDSSEMYDQSSSAKLQGPI 315
           + VLRA+M S    D + C+ + + MPLAVDS +    SSS     P+
Sbjct: 238 SAVLRAVMYSAHPHDIK-CSPDQENMPLAVDSMQFDHTSSSEAPSSPL 284