Miyakogusa Predicted Gene
- Lj4g3v3114020.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v3114020.2 Non Characterized Hit- tr|G7LCF7|G7LCF7_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,85.61,0,LEA_2,Late embryogenesis abundant protein, LEA-14;
seg,NULL,CUFF.52372.2
(279 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr8g106580.1 | late embryogenesis abundant protein | HC | chr... 357 5e-99
Medtr6g081930.1 | late embryogenesis abundant protein | HC | chr... 282 2e-76
Medtr4g075730.1 | late embryogenesis abundant protein | HC | chr... 157 1e-38
Medtr2g101870.1 | late embryogenesis abundant protein | HC | chr... 156 2e-38
Medtr6g087880.1 | late embryogenesis abundant protein | HC | chr... 129 3e-30
Medtr0154s0010.1 | late embryogenesis abundant protein | HC | sc... 124 1e-28
Medtr4g075730.2 | late embryogenesis abundant protein | HC | chr... 104 8e-23
Medtr3g037650.1 | late embryogenesis abundant protein | LC | chr... 100 2e-21
Medtr8g086610.1 | late embryogenesis abundant protein | LC | chr... 93 3e-19
Medtr4g094800.1 | hypothetical protein | HC | chr4:39022367-3902... 65 7e-11
Medtr3g033530.1 | hypothetical protein | HC | chr3:10750798-1074... 62 9e-10
>Medtr8g106580.1 | late embryogenesis abundant protein | HC |
chr8:44974833-44973007 | 20130731
Length = 296
Score = 357 bits (917), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 182/278 (65%), Positives = 201/278 (72%), Gaps = 2/278 (0%)
Query: 1 MHAKTDSEVTSLDASSTTRSPRRPAYYVQSPSHDGEKTTTSFHSTPVIXXXXXXXXXXXX 60
MH KTDSEVTSLDASSTTRSPRRPAYYVQSPSHDGEKTTTSFHSTPVI
Sbjct: 1 MHTKTDSEVTSLDASSTTRSPRRPAYYVQSPSHDGEKTTTSFHSTPVISPMGSPPHSHSS 60
Query: 61 XXXXXXXXKMNHHNHRNNSTKPWKDIDVIEEEGLLQSQDHDYTRSRRXXXXXXXXXXXXX 120
K+N+ NHR+N TKPWK+IDVIEEEGLL +QDH ++ SRR
Sbjct: 61 SSRFSGSRKLNN-NHRSN-TKPWKEIDVIEEEGLLNNQDHHHSLSRRWYFLAFILGFFLL 118
Query: 121 XXXXXXXXWGASRPMKPKIFVKSIKFEHLRVQAGSDATGVATDMITMNSTVRFTYRNTGT 180
WGASRPMKP + +KSIKFEH+RVQAGSDATGVATDMIT+N+TV+FTYRN GT
Sbjct: 119 FTLFSLILWGASRPMKPHVMIKSIKFEHVRVQAGSDATGVATDMITVNATVKFTYRNKGT 178
Query: 181 FFGVHVSSTPLDLSYSEIVIATGNVKQFYXXXXXXXXXXXXXMGSKIPLYXXXXXXXXXX 240
FFGVHVSSTPLDLSYSEIVI TGN+K+FY MGSKIPLY
Sbjct: 179 FFGVHVSSTPLDLSYSEIVIGTGNMKKFYQSRRSQRLVSVAVMGSKIPLYGSGASLSSTT 238
Query: 241 XMPTVPVPLKLSFVIRSRAYVLGKLVKPKYYKRIECSI 278
MPT+PVPLKLSF IRSRAYVLGKLVKPKYYK++ CS+
Sbjct: 239 GMPTLPVPLKLSFEIRSRAYVLGKLVKPKYYKKVHCSV 276
>Medtr6g081930.1 | late embryogenesis abundant protein | HC |
chr6:30580513-30584032 | 20130731
Length = 294
Score = 282 bits (722), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 158/284 (55%), Positives = 184/284 (64%), Gaps = 14/284 (4%)
Query: 1 MHAKTDSEVTSLDASSTTRS----PRRPAYYVQSPSHDGEKT-TTSFHSTPVIXXXXXXX 55
MH KTDSEVT+ +++T PRRP YYVQSPSHDGEKT TTSFHSTPV
Sbjct: 1 MHTKTDSEVTTTSVATSTSPTRSPPRRPLYYVQSPSHDGEKTVTTSFHSTPV-----ASP 55
Query: 56 XXXXXXXXXXXXXKMNHHNHRNNSTKPWKDIDVIEEEGLLQSQDHDYTRSRRXXXXXXXX 115
K H H S PWK IDVIEEEG L+ ++ + SRR
Sbjct: 56 HHSSSSTHFSASKKDQQHQH---SVNPWKHIDVIEEEGFLE-KERNGGYSRRCYFLAFVV 111
Query: 116 XXXXXXXXXXXXXWGASRPMKPKIFVKSIKFEHLRVQAGSDATGVATDMITMNSTVRFTY 175
WGASRPMKPKI +KSIKF+H+ VQAGSD+TGVATDMITMNST++FTY
Sbjct: 112 GFFVLFSLFSLILWGASRPMKPKIVIKSIKFDHVTVQAGSDSTGVATDMITMNSTLKFTY 171
Query: 176 RNTGTFFGVHVSSTPLDLSYSEIVIATGNVKQFYXXXXXXXXXXXXXMGSKIPLYXXXXX 235
RNTGTFFGVHVS+TPL+LSYS+IVIA+GN+K+F+ MGSK+PLY
Sbjct: 172 RNTGTFFGVHVSATPLELSYSDIVIASGNMKEFHQSRRSHRLVSVAVMGSKVPLYGSGAS 231
Query: 236 XXXXXXMPTVPVPLKLSFVIRSRAYVLGKLVKPKYYKRIECSIT 279
MPT+PVPL L+FV+RSRA VLG LVK KYYKRI+CSIT
Sbjct: 232 LSSTTGMPTLPVPLNLNFVMRSRANVLGNLVKHKYYKRIQCSIT 275
>Medtr4g075730.1 | late embryogenesis abundant protein | HC |
chr4:28960090-28965957 | 20130731
Length = 318
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 73/153 (47%), Positives = 102/153 (66%), Gaps = 2/153 (1%)
Query: 129 WGASRPMKPKIFVKSIKFEHLRVQAGSDATGVATDMITMNSTVRFTYRNTGTFFGVHVSS 188
WGAS+ KP++ +KSI FE+L VQ+G+D TGV TDM+++NSTVR YRN TFFGVHV+S
Sbjct: 147 WGASKSYKPRVILKSIVFENLNVQSGNDGTGVPTDMLSLNSTVRILYRNPATFFGVHVTS 206
Query: 189 TPLDLSYSEIVIATGNVKQFYXXXXXXXXXXXXXMGSKIPLY--XXXXXXXXXXXMPTVP 246
TP+ LSY ++ +A+G +++FY G ++PLY + TV
Sbjct: 207 TPMQLSYYQLRLASGQIQEFYQSRKSQRKLAVVVHGYQVPLYGGVSVLGNSNTEHINTVA 266
Query: 247 VPLKLSFVIRSRAYVLGKLVKPKYYKRIECSIT 279
+P+ L+F +RSRAY+LG+LVK +Y RI CSIT
Sbjct: 267 LPMNLTFEVRSRAYILGRLVKSTFYHRIRCSIT 299
>Medtr2g101870.1 | late embryogenesis abundant protein | HC |
chr2:43826956-43829452 | 20130731
Length = 309
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 101/291 (34%), Positives = 144/291 (49%), Gaps = 16/291 (5%)
Query: 1 MHAKTDSEVTSLDASSTTRSPRRPAYYVQSPS---HDGEKTTTSFHSTPVIXXXXXX--- 54
+ AK++S++TSL SS +RSP+RP YYVQSPS HDG+K++ S +TP+
Sbjct: 2 LSAKSESDITSLAPSSPSRSPKRPVYYVQSPSRDSHDGDKSS-SMQATPISNSPMESPSH 60
Query: 55 -------XXXXXXXXXXXXXXKMNHHNHRNNSTKPWKDIDVIEEEGLLQSQDHDYTRSRR 107
R + K W + VI EEG + + D + +RR
Sbjct: 61 PSFGRHSRNSSASRFSGIFRSSSGRKGSRKRNDKGWPECGVILEEGSYR-EFEDMSFARR 119
Query: 108 XXXXXXXXXXXXXXXXXXXXXWGASRPMKPKIFVKSIKFEHLRVQAGSDATGVATDMITM 167
WGASRP K ++ VKS+ +L V G+D TGV T ++T+
Sbjct: 120 FQALIAVFTFLVVFTVFCLIIWGASRPFKAEVTVKSLAVHNLYVWEGTDHTGVPTKILTI 179
Query: 168 NSTVRFTYRNTGTFFGVHVSSTPLDLSYSEIVIATGNVKQFYXXXXXXXXXXXXXMGSKI 227
NST+ N TFFG+HV ++P++L YS+I IATG +K+ Y G+KI
Sbjct: 180 NSTLHMNIYNPATFFGIHVHTSPINLVYSDISIATGELKKHYQPRKSHRIVSVNLEGNKI 239
Query: 228 PLYXXXXXXXXXXXMPTVPVPLKLSFVIRSRAYVLGKLVKPKYYKRIECSI 278
PLY +V V L L F IRSR V+GKLV+ +++K I C +
Sbjct: 240 PLYGAGSTITVSQTG-SVEVALVLKFEIRSRGDVVGKLVRTRHHKEITCPL 289
>Medtr6g087880.1 | late embryogenesis abundant protein | HC |
chr6:33066104-33069639 | 20130731
Length = 307
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/294 (32%), Positives = 133/294 (45%), Gaps = 22/294 (7%)
Query: 1 MHAKTDSEVTSLDASSTTRSPRRPAYYVQSPS----HDGEKTTT---------SFHSTPV 47
MH KTDS+VTS D SS RS ++ YYVQSPS HDG+K++T S S
Sbjct: 1 MHIKTDSDVTSFDPSSP-RSQKQTPYYVQSPSRESSHDGDKSSTMQPSPMDSPSHQSYGH 59
Query: 48 IXXXXXXXXXXXXXXXXXXXXKMNHHNHRNNSTKPWKDIDVIEEEGLLQSQDHDYTR--S 105
K+N R + K W VIEEE S
Sbjct: 60 HSRASSSSRISGGYNSSFLGRKVN----RKVNDKGWIGSKVIEEENGGYGDFDGDGNGVS 115
Query: 106 RRXXXXXXXXXXXXXXXXXXXXXWGASRPMKPKIFVKSIKFEHLRVQAGSDATGVATDMI 165
RR W AS KP++ VKS+ + GSD TGV T M+
Sbjct: 116 RRVQFFVAVVGFVLVFSLFCFIIWAASLHYKPQLSVKSLTVHNFYFGEGSDVTGVPTKML 175
Query: 166 TMNSTVRFTYRNTGTFFGVHVSSTPLDLSYSEIVIATGNVKQFYXXXXXXXXXXXXXMGS 225
T+N ++R N TFFG++VSS ++L YS++ +ATG +K+++ GS
Sbjct: 176 TVNCSMRMLVHNPATFFGIYVSSKSVNLMYSDLTVATGELKKYHQQRKSRRTVSVNIQGS 235
Query: 226 KIPLYXXXXXXXXXXXMPTVPVPLKLSFVIRSRAYVLGKLVKPKYYKRIECSIT 279
K+PLY + + L L F ++SR V+GKLV+ K+ +R+ CSI
Sbjct: 236 KVPLY--GAGADVASSVDNGKISLTLVFEVKSRGNVVGKLVRTKHTQRVSCSIA 287
>Medtr0154s0010.1 | late embryogenesis abundant protein | HC |
scaffold0154:1-1407 | 20130731
Length = 136
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 58/115 (50%), Positives = 77/115 (66%)
Query: 164 MITMNSTVRFTYRNTGTFFGVHVSSTPLDLSYSEIVIATGNVKQFYXXXXXXXXXXXXXM 223
M++MNSTV+ T+RNT TFFGVHV+STPLDL+Y ++ +ATGN+ +FY
Sbjct: 1 MVSMNSTVKMTFRNTATFFGVHVASTPLDLNYYQLTLATGNMPKFYQSRKSQRSIKVMVK 60
Query: 224 GSKIPLYXXXXXXXXXXXMPTVPVPLKLSFVIRSRAYVLGKLVKPKYYKRIECSI 278
GS IPLY P PVPL L+ ++RS+AYVLG LVKPK+ K+IEC++
Sbjct: 61 GSHIPLYGGGARLNTVNGSPVEPVPLTLNIMVRSKAYVLGALVKPKFNKKIECAL 115
>Medtr4g075730.2 | late embryogenesis abundant protein | HC |
chr4:28960090-28962545 | 20130731
Length = 236
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 61/75 (81%)
Query: 129 WGASRPMKPKIFVKSIKFEHLRVQAGSDATGVATDMITMNSTVRFTYRNTGTFFGVHVSS 188
WGAS+ KP++ +KSI FE+L VQ+G+D TGV TDM+++NSTVR YRN TFFGVHV+S
Sbjct: 147 WGASKSYKPRVILKSIVFENLNVQSGNDGTGVPTDMLSLNSTVRILYRNPATFFGVHVTS 206
Query: 189 TPLDLSYSEIVIATG 203
TP+ LSY ++ +A+G
Sbjct: 207 TPMQLSYYQLRLASG 221
>Medtr3g037650.1 | late embryogenesis abundant protein | LC |
chr3:13829626-13832376 | 20130731
Length = 273
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 84/151 (55%), Gaps = 7/151 (4%)
Query: 129 WGASRPMKPKIFVKSIKFEHLRVQAGSDATGVATDMITMNSTVRFTYRNTGTFFGVHVSS 188
W SR KP +F++SI F+ ++ G D G T M+T NS+++ T+ NT TF G+HV+S
Sbjct: 108 WAVSR-QKPDLFLESITFDRYSIEEGIDHYGFNTSMVTTNSSLKLTFTNTATFSGIHVTS 166
Query: 189 TPLDL-SYSEIVIATGNVKQFYXXXXXXXXXXXXXMGSKIPLYXXXXXXXXXXXMPTVPV 247
PL++ +Y+++ IATGN+ FY GS+IP++ +
Sbjct: 167 IPLEMKNYNQLPIATGNIPNFYQRRKSARSIDVKVEGSQIPVHIAPDDYVLGES-----I 221
Query: 248 PLKLSFVIRSRAYVLGKLVKPKYYKRIECSI 278
PL L+ ++ S+A VL LV K+ IECS+
Sbjct: 222 PLTLNMIVNSKANVLWILVTHKFNMNIECSL 252
>Medtr8g086610.1 | late embryogenesis abundant protein | LC |
chr8:35948368-35945564 | 20130731
Length = 279
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 82/153 (53%), Gaps = 4/153 (2%)
Query: 129 WGASRPMKPKIFVKSIKFEHLRVQAGSDATGVATDMITMNSTVRFTYRNTGTFFGVHVSS 188
W R KP+ +++I F+ L VQ G+D T V T ++++NST+ Y N T+FGVHV+S
Sbjct: 110 WAVGRSFKPRANLENIVFKKLDVQFGNDRTEVPTYLLSLNSTITMMYTNPATYFGVHVTS 169
Query: 189 TPLDLSYSEIVIATGNVKQFYXXXXXXXXXXXXXMGSKIPLY--XXXXXXXXXXXMPTVP 246
T L L Y ++ +A+G +++F+ ++PLY M V
Sbjct: 170 TLLQLRYYDLTLASGQMQEFHQSSKSQQKLVVFVSADQVPLYGGISILGNDTIENMNNVA 229
Query: 247 VPLKLSFVIRSRAYVLGKLVKPKYYKRIECSIT 279
+ + ++F ++S+A +LG L +Y+ I C IT
Sbjct: 230 MAMNITFELKSKADILGVL--STFYQTIGCPIT 260
>Medtr4g094800.1 | hypothetical protein | HC |
chr4:39022367-39021274 | 20130731
Length = 171
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 56/115 (48%), Gaps = 20/115 (17%)
Query: 1 MHAKTDSEVTSLDASSTTRSPR--RPAYYVQSP----SHDGEKTTTSFHSTPVIXXXXX- 53
M AKTDSEV+SL SS TRS R YYVQSP S+DGEKTT SF+S+P+
Sbjct: 12 MLAKTDSEVSSLTQSSPTRSRDGLRAVYYVQSPSRDSSNDGEKTTNSFNSSPLQSPLGSP 71
Query: 54 ------------XXXXXXXXXXXXXXXKMNHHNHRNNSTKPWKD-IDVIEEEGLL 95
HN+R + +PWKD + IEEEGLL
Sbjct: 72 PHSHSNSSLGPHSRESSSTRYSASRKSSQASHNNRKGNWRPWKDQFNAIEEEGLL 126
>Medtr3g033530.1 | hypothetical protein | HC |
chr3:10750798-10747558 | 20130731
Length = 350
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 66/148 (44%), Gaps = 2/148 (1%)
Query: 131 ASRPMKPKIFVKSIKFEHLRVQAGSDATGVATDMITMNSTVRFTYRNTGTFFGVHVSSTP 190
A++P PKI + + ++ G D TGV T ++T N ++ N FFG+H+
Sbjct: 182 ATKPPTPKISFEIARIPEFKLGEGVDRTGVTTKILTCNCSMNLIVENKSRFFGLHIRPPK 241
Query: 191 LDLSYSEIVIATGNVKQFYXXXXXXXXXXXXXMGSKIPLYXXXXXXXXXXXMPTVPVPLK 250
+D+ +S + A N + Y + +K P+Y +P+
Sbjct: 242 MDMKFSILPFAFSNGPELYAESGLTVFPLQLEVKNK-PMYGAGRSMEDMLDSGR-GLPIL 299
Query: 251 LSFVIRSRAYVLGKLVKPKYYKRIECSI 278
+ + S V+ LVKPK++ R+EC +
Sbjct: 300 IQVTLSSSFEVVPALVKPKFHHRVECIV 327