Miyakogusa Predicted Gene

Lj4g3v3113260.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v3113260.2 tr|I1KQC8|I1KQC8_SOYBN Glutamyl-tRNA(Gln)
amidotransferase subunit B, chloroplastic/mitochondrial
OS,87.8,0,seg,NULL; gatB: aspartyl/glutamyl-tRNA(Asn/Gln)
amidotransfe,Aspartyl/glutamyl-tRNA(Asn/Gln) amidotr,CUFF.52340.2
         (540 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g055940.1 | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransfera...   925   0.0  

>Medtr5g055940.1 | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase
           subunit B | HC | chr5:23052488-23047084 | 20130731
          Length = 542

 Score =  925 bits (2390), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 449/542 (82%), Positives = 484/542 (89%), Gaps = 4/542 (0%)

Query: 1   MASTIFRTFQLHPFLLCPASFLRTTN----GVVLRCASSDTQQRQPQTKVSTQYKKLDKI 56
           M+ TIFRTFQLHPFLL P S L+  N       ++   S   Q Q +   STQ KKL+ +
Sbjct: 1   MSYTIFRTFQLHPFLLYPTSILKLQNRFFHSTTIKATQSQQTQTQTKHSTSTQSKKLNNL 60

Query: 57  PKDYEAVIGIETHVQLSTLTKAFCGCPYSYGSPPNTTVCPVCMGLPGALPVLNSKVIDFA 116
           PKDYE +IGIETHVQLST TKAFC CPY+YGS PNT++CPVCMGLPGALPVLNSKVI+FA
Sbjct: 61  PKDYEPIIGIETHVQLSTNTKAFCNCPYNYGSFPNTSICPVCMGLPGALPVLNSKVIEFA 120

Query: 117 VKLGLALNCNLSFNSKFDRKQYFYPDLPKGYQISQFDVPIAAGGYLHVDIPLEFGGGHRK 176
           VKLGLALNC L+F+SKFDRKQYFYPDLPKGYQISQFDVPIA+ G+L VDIPLE+GGGH++
Sbjct: 121 VKLGLALNCELAFDSKFDRKQYFYPDLPKGYQISQFDVPIASSGFLDVDIPLEYGGGHKR 180

Query: 177 FGITRVHMEEDAGKLLHTENENYSQVDLNRAGVPLLEIVSEPDMRNGIEAAEYAAEIQRL 236
           FGITRVHMEEDAGKLLHTEN NYSQVDLNRAGVPLLEIVSEPDMRNGIEAAEYAAE+QRL
Sbjct: 181 FGITRVHMEEDAGKLLHTENGNYSQVDLNRAGVPLLEIVSEPDMRNGIEAAEYAAELQRL 240

Query: 237 VRYLGVSNGNMQEGSLRCDVNVSIRPIGQSKFGTKVEIKNLNSFSAVSRAIDFEIARQVQ 296
           VRYLGVSNGNMQEGSLRCDVNVS+RPIGQSKFGTKVE+KNLNSF+++SRAIDFEIARQVQ
Sbjct: 241 VRYLGVSNGNMQEGSLRCDVNVSVRPIGQSKFGTKVEVKNLNSFASMSRAIDFEIARQVQ 300

Query: 297 LHSNGQEDQIVQETRLWEEGSQRTITMRIKEGLADYRYFPEPDLPAVIVSQEYVDGIRNS 356
           LHS GQ DQIVQETR WEEGSQRTITMR KEGLADYRYFPEPDLP+VI+ QEYVDGI+NS
Sbjct: 301 LHSQGQADQIVQETRSWEEGSQRTITMRKKEGLADYRYFPEPDLPSVILYQEYVDGIKNS 360

Query: 357 LPELPEEKRRRYEKMGLSMQDVLFLANDQNIAEFFDATLAKGADAKLVANWIMSDIAAFM 416
           LPELPE KRRRYEKMGL MQDVLFLAND+NIAEFFDATLAKGADAKLVANWIMSDIA FM
Sbjct: 361 LPELPEGKRRRYEKMGLGMQDVLFLANDKNIAEFFDATLAKGADAKLVANWIMSDIAGFM 420

Query: 417 KNEKLSINEIKLTPEELSELIASXXXXXXXXXXXXEILFELLAKGGSVKELIEKKDLVQI 476
           KNEKL+IN+IKLTPEEL+ELIAS            EILFELLA+GGSVKE+IEKKDLVQI
Sbjct: 421 KNEKLTINDIKLTPEELAELIASIKDGTISGKIGKEILFELLAEGGSVKEIIEKKDLVQI 480

Query: 477 ADPAEIEKMVDKVIAENPKQVEQYRGGKTKLQGFFAGQVMKLSKGKANPGLLNKILLEKL 536
            DP EIEKMVDK IA+NPKQVEQYRGGKTKLQGFFAGQVMK SKGKANPGLLNKILLEKL
Sbjct: 481 TDPVEIEKMVDKAIADNPKQVEQYRGGKTKLQGFFAGQVMKASKGKANPGLLNKILLEKL 540

Query: 537 NS 538
           NS
Sbjct: 541 NS 542