Miyakogusa Predicted Gene

Lj4g3v3113180.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v3113180.1 tr|D7KAK3|D7KAK3_ARALL At1g68060/T23K23_9
OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_890198
P,74.24,2e-19,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
coiled-coil,NULL; Myosin_HC-like,Myosin II heavy ch,CUFF.52341.1
         (86 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g021120.1 | microtubule-associated protein 70-1 | HC | chr...   114   2e-26
Medtr1g032520.1 | microtubule-associated protein 70-1 | HC | chr...   114   3e-26
Medtr8g105350.1 | microtubule-associated protein 70-1 | HC | chr...   114   3e-26
Medtr2g026590.1 | myosin II heavy chain family protein | HC | ch...    58   2e-09

>Medtr8g021120.1 | microtubule-associated protein 70-1 | HC |
           chr8:7513735-7521490 | 20130731
          Length = 614

 Score =  114 bits (285), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 56/71 (78%), Positives = 66/71 (92%), Gaps = 4/71 (5%)

Query: 5   CQMLAKKVDTLTKAMEVEAKKMRREVASMEKEVAAMRIEKEQDSRSKRFSSVK----GPM 60
            +MLAKKVDTLTKAMEVEAKKMRREVA+MEKEVAAMR+EKEQ+SR+KRFS++K    GP+
Sbjct: 532 IEMLAKKVDTLTKAMEVEAKKMRREVANMEKEVAAMRVEKEQESRAKRFSNIKGPGPGPV 591

Query: 61  NSAQHQLVSGR 71
           NSAQ+QL+SGR
Sbjct: 592 NSAQNQLISGR 602


>Medtr1g032520.1 | microtubule-associated protein 70-1 | HC |
           chr1:11570553-11577948 | 20130731
          Length = 611

 Score =  114 bits (284), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 53/67 (79%), Positives = 65/67 (97%)

Query: 5   CQMLAKKVDTLTKAMEVEAKKMRREVASMEKEVAAMRIEKEQDSRSKRFSSVKGPMNSAQ 64
            +MLA+KVDTLTKAMEVEAKKMRREVASMEKEVAAMR++K Q++R+KRFS++KGP+NSAQ
Sbjct: 533 IEMLARKVDTLTKAMEVEAKKMRREVASMEKEVAAMRVDKVQENRAKRFSNIKGPVNSAQ 592

Query: 65  HQLVSGR 71
           +QL+SGR
Sbjct: 593 NQLISGR 599


>Medtr8g105350.1 | microtubule-associated protein 70-1 | HC |
           chr8:44452323-44457955 | 20130731
          Length = 616

 Score =  114 bits (284), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 55/69 (79%), Positives = 63/69 (91%)

Query: 5   CQMLAKKVDTLTKAMEVEAKKMRREVASMEKEVAAMRIEKEQDSRSKRFSSVKGPMNSAQ 64
            +MLAKKVDTLTKAMEVEAKKMRREVA MEKEVAAMR++KEQ++++KRFS+VK PMNSAQ
Sbjct: 538 IEMLAKKVDTLTKAMEVEAKKMRREVAVMEKEVAAMRVDKEQETKAKRFSNVKSPMNSAQ 597

Query: 65  HQLVSGRYF 73
            QLVSGR  
Sbjct: 598 QQLVSGRNM 606


>Medtr2g026590.1 | myosin II heavy chain family protein | HC |
           chr2:9642500-9645713 | 20130731
          Length = 552

 Score = 57.8 bits (138), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 29/50 (58%), Positives = 39/50 (78%)

Query: 5   CQMLAKKVDTLTKAMEVEAKKMRREVASMEKEVAAMRIEKEQDSRSKRFS 54
            +ML KKVD LTKAMEVE KKM+RE+A+ EKEVA+++ +  + +RS  FS
Sbjct: 496 IKMLTKKVDALTKAMEVEWKKMKREIAAREKEVASIKSDDRRKNRSSDFS 545