Miyakogusa Predicted Gene

Lj4g3v3113120.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v3113120.1 Non Characterized Hit- tr|I1KQB7|I1KQB7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.45155
PE,91.92,0,Nucleoporin_C,Nucleoporin, Nup133/Nup155-like, C-terminal;
Nucleoporin_N,Nucleoporin, Nup133/Nup155-,CUFF.52325.1
         (1482 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g105290.1 | nuclear pore complex Nup155-like protein | HC ...  2593   0.0  

>Medtr8g105290.1 | nuclear pore complex Nup155-like protein | HC |
            chr8:44427185-44416638 | 20130731
          Length = 1484

 Score = 2593 bits (6722), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1281/1485 (86%), Positives = 1346/1485 (90%), Gaps = 4/1485 (0%)

Query: 1    MSWEDEIVMRDVTNAGLVVSDRIGREVSSQLDFEEALEASRYVSHPYSTQPREWPPLVEV 60
            MSWEDEIV+RDVTNAGLVVSDRIGRE+SSQLD EE+LEASRY SHPYST PREWPPLVEV
Sbjct: 1    MSWEDEIVIRDVTNAGLVVSDRIGREISSQLDLEESLEASRYASHPYSTHPREWPPLVEV 60

Query: 61   VNTWELPPVLIERYNAAGGEGTAFCGIFPEIRRAWASVDNSLFLWRFDKWDGQCPEYSGE 120
             NTWELPPVLIERYNAAGGEGTAFCGIFPEIRRAWASVDNSLFLWRFDKWDGQCPEYSGE
Sbjct: 61   ANTWELPPVLIERYNAAGGEGTAFCGIFPEIRRAWASVDNSLFLWRFDKWDGQCPEYSGE 120

Query: 121  EQAICAVGLAKSKPGVFVEAIQYLLILATPVELILVGVCCSGGADDSDPFEEVSLQPLPE 180
            EQAICAVGLAKSK GVFVEAIQYLLILATPVELILVGVCCSGGAD SDPF EVSLQPLP+
Sbjct: 121  EQAICAVGLAKSKHGVFVEAIQYLLILATPVELILVGVCCSGGADGSDPFAEVSLQPLPD 180

Query: 181  YTIPSDGVTMTCVSCTDKGRIFLAGRDGHIYELLYSTGSGWQKRCRKICVTAGLGSVISR 240
            YTIPSDGVTMT V+CTDKGRIFLAGRDGHIYEL+YSTGSGWQKRCRK+CVTAGLGSVISR
Sbjct: 181  YTIPSDGVTMTSVACTDKGRIFLAGRDGHIYELIYSTGSGWQKRCRKVCVTAGLGSVISR 240

Query: 241  WVIPNVFNFGAVDPIVEMVFDNERQILYARTEEMKLQVYVLGPNGDGQLKKVAEEKNLVN 300
            WVIPNVFNFGAVDP+VEMVFDNERQILYARTEEMKLQVYVLGP GDG LKK+AEE+NLVN
Sbjct: 241  WVIPNVFNFGAVDPVVEMVFDNERQILYARTEEMKLQVYVLGPIGDGPLKKIAEERNLVN 300

Query: 301  QRDAQ--GRQSTGSRVSSRLPKPSIVCISPLSTLESKLLHLVAVLSDGRRMYXXXXXXXX 358
             +DA   GRQS+GSRVSSR PKPSIVCISPLSTLESK LHLVAVLSDGRRMY        
Sbjct: 301  HKDAHHGGRQSSGSRVSSRSPKPSIVCISPLSTLESKSLHLVAVLSDGRRMYLSTSPSSG 360

Query: 359  XXXXFNTNHHKPSCLKVVATRPAPPWGVSGGLTFGTMALAGRPQNEDLSLKVDAAYYSTG 418
                FNT+HHKPSCLKVV TRP+PPWGVSGGLTFGTMALAGRPQNEDLSLKV+AAYYS G
Sbjct: 361  SLNGFNTSHHKPSCLKVVTTRPSPPWGVSGGLTFGTMALAGRPQNEDLSLKVEAAYYSAG 420

Query: 419  TLILSDASPSTIPSLLVLNRDXXXXXXXXGNLGTGMRSSRALRESVSSLPVEGRMLSVAD 478
            TLILSDASP T+PSLLVLNRD        GNLGTG RSSRALRE+VSSLPVEGRMLSVAD
Sbjct: 421  TLILSDASPPTMPSLLVLNRDSSTQSSPSGNLGTGTRSSRALRETVSSLPVEGRMLSVAD 480

Query: 479  VLPLPDTAATVRSLYSEIEFGGYENSMESCERASGKLWSRGDLSTQHILPRRRIVIFSTM 538
            VLPLPDT+ATV+SLYSEIEFGGYE+SMESCERASGKLW+RGDLSTQHILPRRRIVIFSTM
Sbjct: 481  VLPLPDTSATVQSLYSEIEFGGYESSMESCERASGKLWARGDLSTQHILPRRRIVIFSTM 540

Query: 539  GMMEIVFNRPLDILRRLLESNSPRSVLEDFFNRFGAGEAAAMCLMLAARIVHSENLISNV 598
            GMMEIVFNRPLDILRRLLES+SPRSVLEDFFNRFGAGEA+AMCLMLA+RIVHSEN ISNV
Sbjct: 541  GMMEIVFNRPLDILRRLLESSSPRSVLEDFFNRFGAGEASAMCLMLASRIVHSENFISNV 600

Query: 599  IAEKAAEAFEDPRVVGMPQLEGSSALSNTRTAAGGFSMGQVVQEAEPVFSGAHEGLCLCS 658
            IAEKAAEAFEDPR+VGMPQLEGS+ALSNTRTAAGGFSMGQVVQEAEPVFSGAHEGLCLCS
Sbjct: 601  IAEKAAEAFEDPRLVGMPQLEGSNALSNTRTAAGGFSMGQVVQEAEPVFSGAHEGLCLCS 660

Query: 659  SRLLFPLWELPVMVVKGSLGPSGTLSENGVVVCRLSVGAMQVLELKLRSLEKFLRSRRNQ 718
            SRLLFPLWELPVMV+KGSL  SGT  ENGVVVCRLS+ AMQVLE KLRSLEKFLRSRRNQ
Sbjct: 661  SRLLFPLWELPVMVIKGSLSASGTSFENGVVVCRLSIEAMQVLEHKLRSLEKFLRSRRNQ 720

Query: 719  RRGLYGCVAGLGDVSGSILYGNGSALGAGDRSMVRSLFGAYSRNMESNGGGTTNKRQRLP 778
            RRGLYGCVAGLGDVSGSILYG GSALGAGDRSMVR+LFGAYS+NMESNGGG  NKRQRLP
Sbjct: 721  RRGLYGCVAGLGDVSGSILYGGGSALGAGDRSMVRTLFGAYSKNMESNGGGAANKRQRLP 780

Query: 779  YSPAELAAMEVRAMECIRQLLLRSGEALFLLQLLSQHHVTRLIQGFDANLQHALVQLTFH 838
            YSPAELAAMEVRAMECIRQLLLRSGEALFLLQLLSQHHVTRLIQGFDANLQ ALVQLTFH
Sbjct: 781  YSPAELAAMEVRAMECIRQLLLRSGEALFLLQLLSQHHVTRLIQGFDANLQQALVQLTFH 840

Query: 839  QLVCSEEGDRLATRLISALMEYYTGPDGRGTVDDISRRLREGCPSYYKESDYKFFLSVEA 898
            QLVCSEEGD LATRLISALMEYYTG DGRGTVDDIS+RLREGCPSYYKESDYKFFL+VEA
Sbjct: 841  QLVCSEEGDHLATRLISALMEYYTGTDGRGTVDDISKRLREGCPSYYKESDYKFFLAVEA 900

Query: 899  LERAAVTVDAEEKENLAREALNSLSKVPESADLRTVCKRFEDLRFYEAVVCLPLQKAQAL 958
            LERAAVT+D EEKE LAREALN+LSKVPESADLRTVCKRFEDLRFYEAVVCLPLQKAQA+
Sbjct: 901  LERAAVTIDDEEKETLAREALNALSKVPESADLRTVCKRFEDLRFYEAVVCLPLQKAQAI 960

Query: 959  DPAGDAYNDDIDATVREQALVQREQCYEVIISALRSLKGDTLQKEFGSPIRSAASQSALD 1018
            DPAGDAYND+IDATVREQAL QREQCYE+IISALRSLKGD  +KEFGSPI S ASQSALD
Sbjct: 961  DPAGDAYNDEIDATVREQALAQREQCYEIIISALRSLKGDPSRKEFGSPIGS-ASQSALD 1019

Query: 1019 PASRRKYISQIVQLGVQSPDRIFHEYLYQAMIDXXXXXXXXXXXXPDLLPFLQSAGRKPI 1078
            PASR+KYISQIVQLGVQSPDRIFHEYLYQAMID            PDLLPFL+SAGR PI
Sbjct: 1020 PASRKKYISQIVQLGVQSPDRIFHEYLYQAMIDLGLENELLEYGGPDLLPFLKSAGRTPI 1079

Query: 1079 HEVRAVTATTSPIGQSGAPLSSNQVKYYELLARYYVLKRQHMXXXXXXXXXXXXXSIDGV 1138
            HEVRAVTATTSP+GQSGAP+SSNQVKY+ELLARYYVLKRQHM             S DGV
Sbjct: 1080 HEVRAVTATTSPMGQSGAPMSSNQVKYFELLARYYVLKRQHMLAAHALLRLAGRPSTDGV 1139

Query: 1139 PTLEQRCQYLSNAVLQAKNATNNDGLVGSTRSSFDSGFLDLLEGKLAVLRFQIKIKEEFE 1198
            PTLEQRCQYLSNAVLQAKNATN+DGLV STRSS D+G LD+LEGKLAVLRFQIKIKEE E
Sbjct: 1140 PTLEQRCQYLSNAVLQAKNATNSDGLVSSTRSSSDTGLLDMLEGKLAVLRFQIKIKEELE 1199

Query: 1199 AMASRSEGLQGTPDSVQNGLVPEGSSTADPNFANAIREKAKELSSDVKSITQLYNEYAVP 1258
             MAS SE L  T +SV+NGLV + S T D NFANA REKAKELSSD+KSITQLYNEYAVP
Sbjct: 1200 HMASSSEVLHSTSNSVENGLVSDASPTVDANFANATREKAKELSSDLKSITQLYNEYAVP 1259

Query: 1259 FELWEICLEMLYFANYSGENDSSIVRETWARLIDQAISRGGIAEACSVLKRVGPRIYPGD 1318
            F+LWE CLEMLYFANYSG++DSSIVRETWARLIDQAIS GGIAEACSVLKR+GPR+YPGD
Sbjct: 1260 FKLWETCLEMLYFANYSGDSDSSIVRETWARLIDQAISGGGIAEACSVLKRLGPRLYPGD 1319

Query: 1319 GAVLPLDIICLHLEKAGLERLNSGVEPVGDEDVARALVSACKGSAEPVLNAYDQLLSNGA 1378
            G V  LDIICLHLEKA LERLN+GVE VGDEDVARALVSACKG+AEPVLNAYDQLLSNGA
Sbjct: 1320 GTVFQLDIICLHLEKAALERLNTGVESVGDEDVARALVSACKGAAEPVLNAYDQLLSNGA 1379

Query: 1379 XXXXXXXXXXXXXXXXXXXXEWATSVYSHRMGIGASPSR-VLEGGFSLERTVASQGIRDK 1437
                                EWA S+YSHRMG GA+ S  ++ GGFSLERTVASQGIRDK
Sbjct: 1380 ILPSPNLRLRMLRSVLVVLREWAMSIYSHRMGTGATGSSIIIGGGFSLERTVASQGIRDK 1439

Query: 1438 ITSAANRYMTEVRRLALPQNQTEVVYRGFRELEESVISPHSFNRF 1482
            ITS ANRYMTEVRRLALPQ+QTE VY GF+ELEES+ISPHSF+RF
Sbjct: 1440 ITSVANRYMTEVRRLALPQSQTEGVYCGFKELEESLISPHSFDRF 1484