Miyakogusa Predicted Gene

Lj4g3v3113050.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v3113050.1 Non Characterized Hit- tr|I3JYH2|I3JYH2_ORENI
Uncharacterized protein OS=Oreochromis niloticus
GN=SE,25.4,3e-18,Rubis-subs-bind,Rubisco LS methyltransferase,
substrate-binding domain; SET,SET domain; SET domain,N,CUFF.52319.1
         (472 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g105200.1 | histone-lysine N-methyltransferase setd3-like ...   725   0.0  
Medtr5g010630.1 | histone-lysine N-methyltransferase | HC | chr5...   162   6e-40
Medtr2g067520.1 | rubisco methyltransferase family protein | HC ...   110   4e-24
Medtr4g082305.1 | rubisco large subunit N-methyltransferase | HC...    55   2e-07
Medtr4g128240.1 | rubisco methyltransferase family protein | HC ...    52   1e-06
Medtr3g082690.1 | rubisco methyltransferase family protein | HC ...    50   3e-06

>Medtr8g105200.1 | histone-lysine N-methyltransferase setd3-like
           protein | HC | chr8:44369752-44366067 | 20130731
          Length = 482

 Score =  725 bits (1872), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/474 (76%), Positives = 402/474 (84%), Gaps = 6/474 (1%)

Query: 3   TSKMVMSSLTHLRPLTCAASAS---RIVSHPPDLINWVTREGGFVHRAVKIAQL-GSNGL 58
           T+ ++ SSL+H+RPLTC++S S   RI  HP DLI WVTREGGFVHRAVKIAQL  SNGL
Sbjct: 11  TAMLMSSSLSHVRPLTCSSSTSSSSRIAPHPHDLIKWVTREGGFVHRAVKIAQLDSSNGL 70

Query: 59  GLVAKQEIPMGSELIVLPHHIPLQFPSLDVNPHDSALLQLVHHVPEEXXXXXXXXXXXQE 118
           GLVAK++IP+G++LI LP HIPL F + D N H S LLQL  HVP+E            E
Sbjct: 71  GLVAKEDIPIGTDLIALPQHIPLHF-NHDDNSH-SLLLQLTSHVPDELWSMKLGLKLLLE 128

Query: 119 RAKVGSYWWPYISNLPITYSVPIFFPGEDIKNLQYGPLLHQVNKRCRFLLEFEQEVKRAL 178
           RAK+GS+WWPYISNLP TY++PIFFPGEDIKNLQY P+LHQVNKRCRFLL+FEQ+VK AL
Sbjct: 129 RAKLGSFWWPYISNLPQTYTLPIFFPGEDIKNLQYAPILHQVNKRCRFLLDFEQKVKHAL 188

Query: 179 ASLTPDKHPFGGLEVDAPSLGWAMSAVSSRAFRLHGNKDPNGTHVDIPMMLPLIDMCNHS 238
             LTPDKHPFGG EVDA SLGWAMSAVSSRAF+LHGNK  NG + DIPMMLPLIDMCNHS
Sbjct: 189 VGLTPDKHPFGGQEVDASSLGWAMSAVSSRAFKLHGNKQSNGINFDIPMMLPLIDMCNHS 248

Query: 239 FNPNAKIIQEQDSSSTKMQVKVVAKTTIKEDDPLLLCYGNLSNDLFLLDYGFVMHSNPYD 298
           FNPNA+I+QEQ++ STKM VKVVA+  IKEDDPLLLCYG LSNDLFLLDYGFV+ SNPYD
Sbjct: 249 FNPNARIVQEQETGSTKMWVKVVAEKAIKEDDPLLLCYGCLSNDLFLLDYGFVIQSNPYD 308

Query: 299 YIELKYDGAFLDAASTAAGVSSPNFSTPAPWQEHILSQLNLAGEAPDLKVSLGGQEIIEG 358
            IELKYDGA LDAAS AAGVSSPNFSTPAPWQE ILSQLNLAGE PDLKVSLGGQEIIEG
Sbjct: 309 CIELKYDGALLDAASMAAGVSSPNFSTPAPWQELILSQLNLAGETPDLKVSLGGQEIIEG 368

Query: 359 XXXXXXXXXXXSDAETVQKHDLNTLKSLHAEAPLGVANDIAVFRTLIALCVIALGHFPTQ 418
                      SD  +VQKHDLNTLKSL+AEAPLGVAND+AVFRTLIALCVIALGHFPT+
Sbjct: 369 RLLAALRVLLASDMASVQKHDLNTLKSLNAEAPLGVANDLAVFRTLIALCVIALGHFPTK 428

Query: 419 IADDESLLKQGAPGSTELAIQFRMQKKSVIIDVVRDLSRRVKLLSSKETVTAEG 472
           + DDESLLKQGA GSTELAIQFR+QKKSVIIDV+++LSR+VKLLSSKETVTAEG
Sbjct: 429 LMDDESLLKQGASGSTELAIQFRIQKKSVIIDVMKNLSRKVKLLSSKETVTAEG 482


>Medtr5g010630.1 | histone-lysine N-methyltransferase | HC |
           chr5:2885090-2885915 | 20130731
          Length = 104

 Score =  162 bits (410), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 81/103 (78%), Positives = 88/103 (85%), Gaps = 3/103 (2%)

Query: 187 PFGGLEVDAPSLGWAMSAVSSRAFRLHGNKDPNGTHVDIPMMLPLIDMCNHSFNPNAKII 246
           PF G EVDA SLGWAMSAVSSRAF+LHGNK  NG + DIPMMLPLIDMCN+SFNPNA+I+
Sbjct: 5   PFDGQEVDASSLGWAMSAVSSRAFKLHGNKQSNGVNFDIPMMLPLIDMCNNSFNPNARIV 64

Query: 247 QEQDSSSTKMQVKVVAKTTIKEDDPLLLCYGNLSNDLFLLDYG 289
           QEQ+ SSTKM   VVA+  IKEDDPLLL YG LSNDLFLLDYG
Sbjct: 65  QEQE-SSTKMW--VVAEKAIKEDDPLLLWYGCLSNDLFLLDYG 104


>Medtr2g067520.1 | rubisco methyltransferase family protein | HC |
           chr2:28260151-28260681 | 20130731
          Length = 91

 Score =  110 bits (274), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 49/69 (71%), Positives = 57/69 (82%)

Query: 187 PFGGLEVDAPSLGWAMSAVSSRAFRLHGNKDPNGTHVDIPMMLPLIDMCNHSFNPNAKII 246
           PF   EVDA SLGWAMSAVSSRAF+LHGNK  NG + +IPMMLPLIDMCN+SFNPN +I+
Sbjct: 5   PFDCQEVDASSLGWAMSAVSSRAFKLHGNKQSNGINFEIPMMLPLIDMCNNSFNPNDRIV 64

Query: 247 QEQDSSSTK 255
           QEQ++   K
Sbjct: 65  QEQETGENK 73


>Medtr4g082305.1 | rubisco large subunit N-methyltransferase | HC |
           chr4:32029066-32031775 | 20130731
          Length = 490

 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 98/443 (22%), Positives = 167/443 (37%), Gaps = 86/443 (19%)

Query: 35  NWVTREGGFVHRAVKIAQLGSNGLGLVAKQEIPMGSELIVLPHHIPLQFPSLDVNPHDSA 94
            W+  EG    +    A +   GLGLVA ++I     ++ +P         L +NP   A
Sbjct: 60  KWLQEEGVITAKTPVKASVVPEGLGLVALKDISRNDVILQVPKR-------LWINPDAVA 112

Query: 95  LLQLVHHVPEEXXXXXXXXXXXQERAKVGSYWWPYISNLPITYSVPIFFPGEDIKNLQYG 154
             ++     +            +ER++  S W  Y   LP      I++  E+++ LQ  
Sbjct: 113 SSEIGRVCSKLTPWLSVMLFLIRERSREDSVWKHYFGILPQETDSTIYWSEEELQELQGT 172

Query: 155 PLLHQ-------VNKRCRFLLEFEQEVKRALASLTPDKHPFGGLEVDAPSLGWAMSAVSS 207
            LL+        V   C   L+ E+E+      + P+K  F    V      WA   + S
Sbjct: 173 QLLNTTLSVKEYVKNEC---LKLEKEI------ILPNKKLFPS-PVTLDDFFWAFGILRS 222

Query: 208 RAFRLHGNKDPNGTHVDIPMMLPLIDMCNHSFNPNAKIIQEQDSSSTK---------MQV 258
           RAF    N++         +++PL D+ NHS    A++  +  +   K            
Sbjct: 223 RAFSRLRNEN--------LVVIPLADLINHS----ARVTTDDHAYEVKGPAGLFSWDYLF 270

Query: 259 KVVAKTTIKEDDPLLLCYG-NLSNDLFLLDYGFVM-HSNPYDY---IELKYDGAFLDAAS 313
            + +  ++K  + + + Y  N SN    LDYGF+  +++ Y Y   + +     F D   
Sbjct: 271 SLRSPLSVKAGEQVYIQYDLNKSNAELALDYGFIEPNADRYAYTLTLGISESDPFFDDKV 330

Query: 314 TAAGVSSPNFSTPA--------PWQEHILSQLNLAGEAPDLKVSLGGQEIIEGXXXXXXX 365
             A   S  FS  A        P  E +L  L L        V+LGG             
Sbjct: 331 DVA--ESNGFSQTAYFDIFYNRPLPEGMLPYLRL--------VALGG------------- 367

Query: 366 XXXXSDAETVQKHDLNTLKSLHAEAPLGVANDIAVFRTLIALCVIALGHFPTQIADDESL 425
               +DA  ++    +++   H E P+   N+  V + +   C  AL  + T I  D  L
Sbjct: 368 ----TDAFLLESLFRDSIWG-HLEVPMSRDNEELVCKAVRDACKSALAGYHTTIEQDRKL 422

Query: 426 LKQGAPGSTELAIQFRMQKKSVI 448
            +        +A+  R  +K ++
Sbjct: 423 KEANLESRLAIAVGIREGEKLIL 445


>Medtr4g128240.1 | rubisco methyltransferase family protein | HC |
           chr4:53384921-53373038 | 20130731
          Length = 639

 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 67/281 (23%), Positives = 114/281 (40%), Gaps = 18/281 (6%)

Query: 33  LINWVTREGGFVHRAVKIAQLGSNGLGLVAKQEIPMGSELIVLPHHIPLQFPSLDVNPHD 92
           LI W    G  V   +KIA +   G G++A +++ +G   I +P  + +    L +    
Sbjct: 241 LIEWGKSHG--VKTGLKIAYVEGAGRGMIAGKDLKVGDIAIEIPVSLIIS-EELVLETDM 297

Query: 93  SALLQLVHHVPEEXXXXXXXXXXXQERAKVGSYWWPYISNLPITYSVPIFFPGEDIKNLQ 152
             LL+ V  +  E           +E+    S +  Y   LP  ++  + F  E I  L 
Sbjct: 298 YRLLKEVDGISSETILLLWSM---KEKYNCDSKFKIYFDTLPEKFNTGLSFGIEAITMLD 354

Query: 153 YGPLLHQVNKRCRFLLEFEQEVKRALASLTPDKHPFGGLEVDA-PSLGWAMSAVSSRAFR 211
              L  ++ +  + L     E+  AL +  PD  P    E+    +  WA     S + +
Sbjct: 355 GTLLFEEIMQSRQHLHAQYDELVPALCNGFPDIFP---PEIYTWENFLWACELWYSNSMK 411

Query: 212 LHGNKDPNGTHVDIPMMLPLIDMCNHSFNPNAKIIQEQDSSSTKMQVKVVAKTTIKEDDP 271
           +  +     T      ++PL    NHS  P+     + D S+  +  K     + +  + 
Sbjct: 412 IMYSDGKLRT-----CLIPLAGFLNHSLCPHITHYGKVDPSTNSL--KFCLSRSCRSGEE 464

Query: 272 LLLCYGNLSNDLFLLDYGFV-MHSNPYDYIELKYDGAFLDA 311
             L YGN S+  F+  YGF+    NPYD I L  D + +D+
Sbjct: 465 CCLSYGNFSSSHFITFYGFLPQGDNPYDVIPLDIDSSDVDS 505


>Medtr3g082690.1 | rubisco methyltransferase family protein | HC |
           chr3:37307346-37311457 | 20130731
          Length = 497

 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 72/300 (24%), Positives = 120/300 (40%), Gaps = 29/300 (9%)

Query: 9   SSLTHLRPLTCAASASRIVSHPPDLINWVTREGGFVHRAVKIAQLGSNGLGLVAKQEIPM 68
           SSL    P  C   +   + +   L  W++ + G   + + I ++     GLVA   I  
Sbjct: 49  SSLIETIPWGCENDS---IENSSSLQKWLS-QSGLPSQKMSIDKVDVGERGLVALNNIRK 104

Query: 69  GSELIVLPHHIPLQFPSLDVNPHDSALLQLVHHVPEEXXXXXXXXXXXQERAKVGSYWWP 128
           G +L+ +P  + +   S    P    +L+  + VP+            +      S W+ 
Sbjct: 105 GEKLLFVPPQLVITPDSEWSCPEAGEVLK-KNSVPD--WPLLATYLISEASLMKSSRWFS 161

Query: 129 YISNLPIT-YSVPIFFPGEDIKNLQYGPLLHQVNKRCRFLLEFEQEVKRALASLTPDKHP 187
           YIS LP   YS+  +   E  + L+   +  +  +R   ++    +++  + S  PD  P
Sbjct: 162 YISALPRQPYSLLYWSQAELDRYLEASQIRERAIERTNNVIGTYNDMRVRIFSKYPDFFP 221

Query: 188 FGGLEVDAPSLGWAMSAVSSRAFRLHGNKDPNGTHVDIPMMLPLIDMCNHSFNPNAKIIQ 247
                ++  S  W+   + SR  RL      N        ++P  DM NHS     +   
Sbjct: 222 EEVFNIE--SFKWSFGILFSRMVRLPSMDGKNA-------LVPWADMMNHS--CEVETFL 270

Query: 248 EQDSSSTKMQVKVVAKTTIKEDDP---LLLCYGNLSNDLFLLDYGFVMH--SNPYDYIEL 302
           + D SS     K +   T +   P   + + YG  SN   LL YGFV    +NP D +EL
Sbjct: 271 DYDKSS-----KGIVFPTDRPYQPGEQVFISYGKKSNGELLLSYGFVPKEGTNPSDSVEL 325