Miyakogusa Predicted Gene

Lj4g3v3112910.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v3112910.1 Non Characterized Hit- tr|I1KQ73|I1KQ73_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,75.57,0,PUG
domain-like,NULL; Ubiquitin-like,NULL; UBX-RELATED,NULL;
coiled-coil,NULL; domain in protein kin,CUFF.52313.1
         (466 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g104930.1 | plant UBX domain protein | HC | chr8:44238774-...   616   e-176

>Medtr8g104930.1 | plant UBX domain protein | HC |
           chr8:44238774-44235496 | 20130731
          Length = 463

 Score =  616 bits (1589), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 316/487 (64%), Positives = 358/487 (73%), Gaps = 47/487 (9%)

Query: 1   MGDMKDKVKGFMKKVNNPFTSSSSGKFKGQGRVLGXXXXXXXXXAPIXXXXXXXXXXXXX 60
           M D+KDK+KGF+KKVNNPFTSSSSGKFKGQGRVLG           I             
Sbjct: 1   MDDVKDKMKGFIKKVNNPFTSSSSGKFKGQGRVLGSSSSSSTPANSI------------- 47

Query: 61  XXXXXXSKPRPASTTNHEPSPQKTN--------------------RNPGDGFDPFDSLVT 100
                        T  H PSP +                      R P DGFDPFDSLVT
Sbjct: 48  ------------PTPTHRPSPSQNPNPKPKPTPPIASDQSKIDKPRKPADGFDPFDSLVT 95

Query: 101 SSNRSQNGYSLNVYECPICKQPFRSEEEVSEHVDTCLSTPAEGD--CEKGVSELALTEAE 158
           SS RSQNGYSLNVYECPICKQPFRSE+EV+EHV++CLS P E D   EK VS+L  ++  
Sbjct: 96  SSQRSQNGYSLNVYECPICKQPFRSEDEVTEHVESCLSNPIENDDVDEKCVSKLKESQVS 155

Query: 159 SQNSELEVCVGTFLSGNPSEGSLDVVLKLLRNIAREPENVKFRKIRMSNPKIKEAVAEVT 218
             N+ELE+C+GT++SGNPS+GS+D+VLKLLRNI +EP+NVKFRKIRM NPKIKEA+ EV 
Sbjct: 156 ESNTELEICIGTYVSGNPSQGSVDIVLKLLRNIVKEPDNVKFRKIRMGNPKIKEAIGEVI 215

Query: 219 GGIELLSFLGFELREENGDTWAVMEVPTEEQIKVIKKAXXXXXXXXXXQPSKRDNLVTST 278
           GG+ELLS LGFEL+EENG+TWA+MEVPTEE++ +IKKA             KR+N   + 
Sbjct: 216 GGVELLSLLGFELKEENGETWALMEVPTEEKVNLIKKAIVLLEPQLVQDTPKRENSTPTV 275

Query: 279 SAEKDVKAEPKKVDRQVKVFFAVPESVAAKIELPDSFYKLSXXXXXXXXXXXXXXXXXSQ 338
           S EK  +AEPKK+DRQVKVFFAV ESVAA+IELPDSFYK S                 SQ
Sbjct: 276 STEKVAEAEPKKIDRQVKVFFAVSESVAARIELPDSFYKRSAEEVRREAELRRKKIEESQ 335

Query: 339 LLIPKSLREKQAKAARRRYTKTIIRIQFPDGVVLQGVFSPWEPTTALYEFVSSALKEQAL 398
           LLIPKSL+EKQAKAA+RRYT+TIIRIQFPDGVVLQGVF+PWEPTTALYEFVSSALKE  L
Sbjct: 336 LLIPKSLKEKQAKAAKRRYTRTIIRIQFPDGVVLQGVFAPWEPTTALYEFVSSALKESCL 395

Query: 399 EFELMHPVVIKRRVIPHFPKAGENAKTIEEEDLVPSALIKFKPLETDSVVFTGLRNELLE 458
           EFELMHPVV++RRVIP FPKAG+ AKTIEEEDLVPSALIKFKPLETDSVVFTGL+NELLE
Sbjct: 396 EFELMHPVVVQRRVIPCFPKAGQKAKTIEEEDLVPSALIKFKPLETDSVVFTGLKNELLE 455

Query: 459 ISEPLVN 465
           ISEPLVN
Sbjct: 456 ISEPLVN 462