Miyakogusa Predicted Gene
- Lj4g3v3099280.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v3099280.1 Non Characterized Hit- tr|G7KN45|G7KN45_MEDTR
Putative uncharacterized protein OS=Medicago truncatul,67.35,4e-19,
,CUFF.52269.1
(166 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr8g104210.1 | hypothetical protein | HC | chr8:43887786-4388... 205 1e-53
Medtr8g104210.3 | hypothetical protein | HC | chr8:43887776-4388... 205 1e-53
Medtr8g104210.2 | hypothetical protein | HC | chr8:43887902-4388... 192 1e-49
Medtr6g084470.1 | hypothetical protein | HC | chr6:31639571-3164... 174 5e-44
Medtr6g018430.1 | hypothetical protein | HC | chr6:7060057-70571... 105 2e-23
Medtr1g110760.1 | hypothetical protein | HC | chr1:49993647-4999... 91 7e-19
Medtr1g110760.2 | hypothetical protein | HC | chr1:49993658-4999... 91 7e-19
Medtr1g110760.3 | hypothetical protein | HC | chr1:49993668-4999... 91 7e-19
Medtr4g087400.1 | hypothetical protein | HC | chr4:34302650-3430... 67 8e-12
Medtr1g051170.1 | hypothetical protein | HC | chr1:19981243-1998... 63 1e-10
>Medtr8g104210.1 | hypothetical protein | HC |
chr8:43887786-43886150 | 20130731
Length = 172
Score = 205 bits (522), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 117/175 (66%), Positives = 125/175 (71%), Gaps = 12/175 (6%)
Query: 1 MNCYAYYGYQQNNTLTSC-EEMRMESVVCPKPRRMSQLNH--SSMNNQIRPSRRPMGYQS 57
MNCY YGY Q NT+TS EE+RME VVCPKPRR+ NH SS+NN IRP R P+ YQS
Sbjct: 1 MNCY--YGYPQMNTMTSSYEEVRMEPVVCPKPRRLGLSNHHQSSINNHIRPLRCPISYQS 58
Query: 58 EIEDSGVGAELLDIILPKDSCYPESDRSG-----ESPFFCGSPPSRASNPVIQDEQFGNG 112
EIEDSGVGAELL+II PK SCYPE + P+F GSPPSRASNPVIQDEQFGNG
Sbjct: 59 EIEDSGVGAELLEIIHPKASCYPERSAAANLLASSPPYFIGSPPSRASNPVIQDEQFGNG 118
Query: 113 NXXXXXXXXXXXXXXXXRGC-VPMKFGNTPAVVRIEGFDCLTRDRRSNRSISAVA 166
N RGC VPMKFGNTPA VRIEGFDCL RDRRSN SISAVA
Sbjct: 119 N-FSSPFTMVASPSPSARGCGVPMKFGNTPAAVRIEGFDCLRRDRRSNCSISAVA 172
>Medtr8g104210.3 | hypothetical protein | HC |
chr8:43887776-43886067 | 20130731
Length = 172
Score = 205 bits (522), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 117/175 (66%), Positives = 125/175 (71%), Gaps = 12/175 (6%)
Query: 1 MNCYAYYGYQQNNTLTSC-EEMRMESVVCPKPRRMSQLNH--SSMNNQIRPSRRPMGYQS 57
MNCY YGY Q NT+TS EE+RME VVCPKPRR+ NH SS+NN IRP R P+ YQS
Sbjct: 1 MNCY--YGYPQMNTMTSSYEEVRMEPVVCPKPRRLGLSNHHQSSINNHIRPLRCPISYQS 58
Query: 58 EIEDSGVGAELLDIILPKDSCYPESDRSG-----ESPFFCGSPPSRASNPVIQDEQFGNG 112
EIEDSGVGAELL+II PK SCYPE + P+F GSPPSRASNPVIQDEQFGNG
Sbjct: 59 EIEDSGVGAELLEIIHPKASCYPERSAAANLLASSPPYFIGSPPSRASNPVIQDEQFGNG 118
Query: 113 NXXXXXXXXXXXXXXXXRGC-VPMKFGNTPAVVRIEGFDCLTRDRRSNRSISAVA 166
N RGC VPMKFGNTPA VRIEGFDCL RDRRSN SISAVA
Sbjct: 119 N-FSSPFTMVASPSPSARGCGVPMKFGNTPAAVRIEGFDCLRRDRRSNCSISAVA 172
>Medtr8g104210.2 | hypothetical protein | HC |
chr8:43887902-43886067 | 20130731
Length = 163
Score = 192 bits (489), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 109/163 (66%), Positives = 117/163 (71%), Gaps = 10/163 (6%)
Query: 13 NTLTSC-EEMRMESVVCPKPRRMSQLNH--SSMNNQIRPSRRPMGYQSEIEDSGVGAELL 69
NT+TS EE+RME VVCPKPRR+ NH SS+NN IRP R P+ YQSEIEDSGVGAELL
Sbjct: 2 NTMTSSYEEVRMEPVVCPKPRRLGLSNHHQSSINNHIRPLRCPISYQSEIEDSGVGAELL 61
Query: 70 DIILPKDSCYPESDRSG-----ESPFFCGSPPSRASNPVIQDEQFGNGNXXXXXXXXXXX 124
+II PK SCYPE + P+F GSPPSRASNPVIQDEQFGNGN
Sbjct: 62 EIIHPKASCYPERSAAANLLASSPPYFIGSPPSRASNPVIQDEQFGNGN-FSSPFTMVAS 120
Query: 125 XXXXXRGC-VPMKFGNTPAVVRIEGFDCLTRDRRSNRSISAVA 166
RGC VPMKFGNTPA VRIEGFDCL RDRRSN SISAVA
Sbjct: 121 PSPSARGCGVPMKFGNTPAAVRIEGFDCLRRDRRSNCSISAVA 163
>Medtr6g084470.1 | hypothetical protein | HC |
chr6:31639571-31641580 | 20130731
Length = 167
Score = 174 bits (440), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 104/170 (61%), Positives = 115/170 (67%), Gaps = 14/170 (8%)
Query: 6 YYGYQQNNTLTSCEEMRMESVVCPKPRRMSQLNHSSMNNQIRPSR-RPMGYQSEIEDSGV 64
+ GYQQ N + SCEEMRMES+VCPKP R +N N IRP R + + YQSE+EDSGV
Sbjct: 3 HCGYQQKNAMRSCEEMRMESLVCPKPIRFGLMNR----NHIRPFRPQILSYQSEVEDSGV 58
Query: 65 GAELLDIILPKDSCYPE--SDRSGESP--FFCGSPPSRASNPVIQDEQFGNGNXX---XX 117
+LLDIILPK +CY E D+ G SP FFCGSPPSRASNPVIQDEQFGNGN
Sbjct: 59 REDLLDIILPKGNCYSERFGDQFGSSPPPFFCGSPPSRASNPVIQDEQFGNGNGHGNFSP 118
Query: 118 XXXXXXXXXXXXRGCVPM-KFGNTPAVVRIEGFDCLTRDRRSNRSISAVA 166
RGC PM KFG+T A VRIEGFDCL RD RSN SISAVA
Sbjct: 119 FSMAPSSPSSSARGCAPMKKFGHTQAAVRIEGFDCLNRD-RSNCSISAVA 167
>Medtr6g018430.1 | hypothetical protein | HC | chr6:7060057-7057115
| 20130731
Length = 168
Score = 105 bits (262), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 93/177 (52%), Gaps = 20/177 (11%)
Query: 1 MNCYAYYGYQQNNTLTSCEEMR--------MESVVCPKPRRMSQLNHSSMNNQIRPSRRP 52
MN Y+ Q N +CEEMR E ++CPKPRR+ L+ N +R R
Sbjct: 1 MNRYSL----QQNAFAACEEMRGSVTITDQKEPLICPKPRRVGVLS----NVPVRQLRFH 52
Query: 53 MGYQSEIEDSGVGAELLDIILPKDSCYPE--SDRSGESPFFCGSPPSRASNPVIQDEQFG 110
+Q+E DS AELLD+I K+S + + + P+F SPP RA+NP++QD +FG
Sbjct: 53 FNHQAEGSDSKAAAELLDMIFEKESHGDDFANHVAYSPPYFSVSPPVRAANPLVQDARFG 112
Query: 111 NGNXXXXXXXXXXXXXXXXRG-CVPMKFGNTPAVVRIEGFDCLTRDRRSNRSISAVA 166
N +G CV FG PA VR+EGFDCL RDR+ N S+ AVA
Sbjct: 113 NEIISSSPSGLPSPNSASRKGGCVRTSFGLKPAAVRVEGFDCLNRDRQ-NSSVPAVA 168
>Medtr1g110760.1 | hypothetical protein | HC |
chr1:49993647-49995728 | 20130731
Length = 160
Score = 90.5 bits (223), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/158 (43%), Positives = 80/158 (50%), Gaps = 17/158 (10%)
Query: 24 ESVVCPKPRRMSQLNHSSMNNQIRPSRRPMGYQSEIEDSGVGAE-LLDIILPKDSCYPES 82
ESVVCPKPRR+ LN + + R R + Q E DS A LD IL KD +
Sbjct: 5 ESVVCPKPRRVGLLNFAVNDYPSRSFRWHLSCQVEPCDSNSSASNPLDTILTKDDDFDRE 64
Query: 83 D-----RSGESPFFCGSPPSRASNPVIQDEQFGNGNXXXXXXXXXXXXXXXXR------- 130
S PFFCGSPPSR +NP+IQD +FG+ N
Sbjct: 65 QLSPPVASSPPPFFCGSPPSRVANPLIQDARFGDENFSPSSWVVVPAPSGLPPSPPSSAR 124
Query: 131 --GCVPMKFGNTPAVVRIEGFDCLTRDRRSNRSISAVA 166
GCV FGN PA VR+EGFDCL RD R N SI+A+A
Sbjct: 125 KGGCVRANFGNNPA-VRVEGFDCLDRDSR-NCSIAALA 160
>Medtr1g110760.2 | hypothetical protein | HC |
chr1:49993658-49995728 | 20130731
Length = 160
Score = 90.5 bits (223), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/158 (43%), Positives = 80/158 (50%), Gaps = 17/158 (10%)
Query: 24 ESVVCPKPRRMSQLNHSSMNNQIRPSRRPMGYQSEIEDSGVGAE-LLDIILPKDSCYPES 82
ESVVCPKPRR+ LN + + R R + Q E DS A LD IL KD +
Sbjct: 5 ESVVCPKPRRVGLLNFAVNDYPSRSFRWHLSCQVEPCDSNSSASNPLDTILTKDDDFDRE 64
Query: 83 D-----RSGESPFFCGSPPSRASNPVIQDEQFGNGNXXXXXXXXXXXXXXXXR------- 130
S PFFCGSPPSR +NP+IQD +FG+ N
Sbjct: 65 QLSPPVASSPPPFFCGSPPSRVANPLIQDARFGDENFSPSSWVVVPAPSGLPPSPPSSAR 124
Query: 131 --GCVPMKFGNTPAVVRIEGFDCLTRDRRSNRSISAVA 166
GCV FGN PA VR+EGFDCL RD R N SI+A+A
Sbjct: 125 KGGCVRANFGNNPA-VRVEGFDCLDRDSR-NCSIAALA 160
>Medtr1g110760.3 | hypothetical protein | HC |
chr1:49993668-49995728 | 20130731
Length = 160
Score = 90.5 bits (223), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/158 (43%), Positives = 80/158 (50%), Gaps = 17/158 (10%)
Query: 24 ESVVCPKPRRMSQLNHSSMNNQIRPSRRPMGYQSEIEDSGVGAE-LLDIILPKDSCYPES 82
ESVVCPKPRR+ LN + + R R + Q E DS A LD IL KD +
Sbjct: 5 ESVVCPKPRRVGLLNFAVNDYPSRSFRWHLSCQVEPCDSNSSASNPLDTILTKDDDFDRE 64
Query: 83 D-----RSGESPFFCGSPPSRASNPVIQDEQFGNGNXXXXXXXXXXXXXXXXR------- 130
S PFFCGSPPSR +NP+IQD +FG+ N
Sbjct: 65 QLSPPVASSPPPFFCGSPPSRVANPLIQDARFGDENFSPSSWVVVPAPSGLPPSPPSSAR 124
Query: 131 --GCVPMKFGNTPAVVRIEGFDCLTRDRRSNRSISAVA 166
GCV FGN PA VR+EGFDCL RD R N SI+A+A
Sbjct: 125 KGGCVRANFGNNPA-VRVEGFDCLDRDSR-NCSIAALA 160
>Medtr4g087400.1 | hypothetical protein | HC |
chr4:34302650-34302222 | 20130731
Length = 142
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 57/133 (42%), Gaps = 28/133 (21%)
Query: 28 CPKPRRMSQLNHSSMNNQIRPSRRPMGYQSEIEDSGVGAELLDIILPKDSCYPESDRSGE 87
CPKP QL R ++E DS VG ELL II KD S
Sbjct: 22 CPKPIPTRQL------------RLKFCQENEGYDSNVGIELLHIIQNKDV-------SSS 62
Query: 88 SPFFCGSPPSRASNPVIQDEQFGNGNXXXXXXXXXXXXXXX---------XRGCVPMKFG 138
P+F GSPP RASNP++QDEQF RGCV MKFG
Sbjct: 63 PPYFLGSPPVRASNPLVQDEQFKWEEHIPQSTPVVSSASSGLSSPSSPFRKRGCVRMKFG 122
Query: 139 NTPAVVRIEGFDC 151
+ VR+ GFDC
Sbjct: 123 VKSSKVRVVGFDC 135
>Medtr1g051170.1 | hypothetical protein | HC |
chr1:19981243-19980776 | 20130731
Length = 155
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 54/124 (43%), Gaps = 29/124 (23%)
Query: 50 RRPMGY----QSEIEDSGVGAELLDIILPKDSCYPESDRSGESPFFCGSPPSRASNPVIQ 105
R+ +G+ ++E DS VG ELLDII K+ S P+F GSPP R SNP++Q
Sbjct: 32 RKQLGWKFCQENEGHDSNVGTELLDIIQNKEV-------SSSPPYFLGSPPVRVSNPLVQ 84
Query: 106 DEQFGNGNXXXXXXXXXXXXXXXXR------------------GCVPMKFGNTPAVVRIE 147
DEQF GCV MKFG A VR+
Sbjct: 85 DEQFTWEEHIPQSTPVVSSSPGLSSPSSASSGLSSPSSPFRKGGCVRMKFGVKSAKVRVV 144
Query: 148 GFDC 151
GFDC
Sbjct: 145 GFDC 148