Miyakogusa Predicted Gene
- Lj4g3v3099260.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v3099260.1 tr|Q10E18|Q10E18_ORYSJ CCT motif family protein,
expressed OS=Oryza sativa subsp. japonica
GN=LOC_Os,41.45,2e-18,B-Box-type zinc finger,Zinc finger, B-box;
ZF_BBOX,Zinc finger, B-box; CCT,CCT domain; zf-B_box,Zinc,CUFF.52262.1
(407 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr8g104190.1 | zinc finger constans-like protein | HC | chr8:... 491 e-139
Medtr1g110870.1 | zinc finger constans-like protein | HC | chr1:... 279 4e-75
Medtr5g072780.1 | CCT motif protein | HC | chr5:30979956-3098159... 92 8e-19
Medtr7g032240.1 | CCT motif protein | HC | chr7:11334447-1133006... 82 7e-16
Medtr4g127420.1 | import apparatus protein | HC | chr4:52887578-... 74 4e-13
Medtr7g018170.1 | zinc finger constans-like protein | HC | chr7:... 68 1e-11
Medtr3g105710.1 | zinc finger constans-like protein | HC | chr3:... 68 1e-11
Medtr4g128930.1 | zinc finger constans-like protein | HC | chr4:... 67 4e-11
Medtr1g013450.1 | zinc finger constans-like protein | HC | chr1:... 66 5e-11
Medtr2g099010.1 | salt tolerance-like protein | HC | chr2:424100... 58 1e-08
Medtr2g099010.2 | salt tolerance-like protein | HC | chr2:424100... 58 1e-08
Medtr3g117320.1 | salt tolerance-like protein | HC | chr3:548802... 56 7e-08
Medtr7g118260.3 | PRR response regulator | HC | chr7:49081893-49... 55 1e-07
Medtr4g067320.1 | salt tolerance-like protein | HC | chr4:254160... 55 1e-07
Medtr4g067320.2 | salt tolerance-like protein | HC | chr4:254160... 55 1e-07
Medtr7g118260.4 | PRR response regulator | HC | chr7:49081893-49... 55 1e-07
Medtr3g092780.1 | PRR response regulator | HC | chr3:42411882-42... 55 2e-07
Medtr3g092780.2 | PRR response regulator | HC | chr3:42411881-42... 55 2e-07
Medtr3g092780.4 | PRR response regulator | HC | chr3:42411907-42... 55 2e-07
Medtr3g092780.3 | PRR response regulator | HC | chr3:42411881-42... 55 2e-07
Medtr3g113070.1 | salt tolerance-like protein | HC | chr3:528236... 54 2e-07
Medtr7g083540.1 | zinc finger constans-like protein | HC | chr7:... 54 2e-07
Medtr7g118260.1 | PRR response regulator | HC | chr7:49081893-49... 54 2e-07
Medtr2g088900.1 | zinc finger constans-like protein | HC | chr2:... 54 2e-07
Medtr7g118260.2 | PRR response regulator | HC | chr7:49081784-49... 54 2e-07
Medtr4g108880.2 | two-component response regulator-like APRR7 pr... 54 2e-07
Medtr4g108880.1 | two-component response regulator-like APRR7 pr... 54 2e-07
Medtr7g108150.1 | zinc finger constans-like protein | HC | chr7:... 54 3e-07
Medtr4g061360.5 | PRR response regulator | HC | chr4:22682971-22... 54 3e-07
Medtr4g061360.1 | PRR response regulator | HC | chr4:22682971-22... 54 3e-07
Medtr4g061360.2 | PRR response regulator | HC | chr4:22682971-22... 54 3e-07
Medtr4g061360.3 | PRR response regulator | HC | chr4:22682971-22... 54 3e-07
Medtr4g061360.4 | PRR response regulator | HC | chr4:22682971-22... 54 3e-07
Medtr1g023260.3 | salt tolerance-like protein | HC | chr1:744879... 54 3e-07
Medtr1g023260.1 | salt tolerance-like protein | HC | chr1:744874... 54 3e-07
Medtr5g021580.1 | salt tolerance-like protein | HC | chr5:835529... 53 5e-07
Medtr5g021580.2 | salt tolerance-like protein | HC | chr5:835529... 53 5e-07
Medtr3g037390.2 | timing of cab expression 1/PRR response regula... 53 7e-07
Medtr4g071200.1 | salt tolerance-like protein | HC | chr4:268456... 52 8e-07
Medtr1g023260.4 | salt tolerance-like protein | HC | chr1:744879... 52 9e-07
Medtr3g037390.1 | timing of cab expression 1/PRR response regula... 52 9e-07
Medtr2g073370.1 | B-box type zinc finger protein | HC | chr2:310... 52 1e-06
Medtr3g082630.1 | B-box type zinc finger protein | HC | chr3:372... 52 1e-06
Medtr3g082630.2 | B-box type zinc finger protein | HC | chr3:372... 52 1e-06
Medtr1g073350.1 | CCT motif protein | HC | chr1:32553600-3255596... 51 2e-06
Medtr8g024260.1 | PRR response regulator | LC | chr8:8900931-889... 50 3e-06
Medtr1g044785.1 | CCT motif protein | HC | chr1:16921077-1692325... 50 4e-06
Medtr4g093730.1 | GATA transcription factor | HC | chr4:37055500... 49 9e-06
>Medtr8g104190.1 | zinc finger constans-like protein | HC |
chr8:43867638-43869522 | 20130731
Length = 416
Score = 491 bits (1264), Expect = e-139, Method: Compositional matrix adjust.
Identities = 284/440 (64%), Positives = 320/440 (72%), Gaps = 57/440 (12%)
Query: 1 MTSDMRG---AGALGAKTARACDSCLRRRARWFCGADDAFLCHGCDTLVHSANQLASRHE 57
M DM+G AGALGAKTARACDSCLRRRARWFC ADDAFLCHGCD LVHSAN LASRHE
Sbjct: 1 MIIDMKGDADAGALGAKTARACDSCLRRRARWFCAADDAFLCHGCDNLVHSANLLASRHE 60
Query: 58 RVRLQSASSKVTTT-QAWHSGFTRKARTPRQKNHNLAL---QQRFKEKVLFNNTSSVVLP 113
RVRLQ+AS+KVTTT QAWHSGFTRKARTPR N N ++ QQR KEKVLFN + LP
Sbjct: 61 RVRLQTASAKVTTTAQAWHSGFTRKARTPRH-NKNSSIQQQQQRLKEKVLFNTS---FLP 116
Query: 114 LVPELGGEE---QEQLVDDDES-EEQLLFRVPVFE--PFDGEPCIKELKYNTQNDAADDE 167
LVPELGGEE QE LVD DE+ EEQLL RVPVF+ PFD E C +NDA D E
Sbjct: 117 LVPELGGEEEQGQELLVDIDEADEEQLLCRVPVFDANPFDLETC------TVKNDAVDFE 170
Query: 168 EACNLESFCDFDVDLAEFAASVQSLLGNGVHE----DLGEVFNYTKEDEIAAYVIGDAAT 223
E C+L+SFC+FDVDLAEFAA+V+SLLG G E G+VF+Y +E+E+ DA+
Sbjct: 171 EMCDLDSFCEFDVDLAEFAANVESLLGVGSSEIQENSSGQVFDYKQENEM------DASK 224
Query: 224 SEKAKVKDEELDTADTNRGCHLESVLDITSNEAFEWNID----SMLQEEKEAVVASNS-- 277
SE KVKDEELD LESV D+TS++ F WNID S+ Q+EKE + SNS
Sbjct: 225 SEMLKVKDEELD--------DLESVFDMTSDDVFHWNIDNNDVSLAQQEKEYMPLSNSSV 276
Query: 278 GERE-----EGTKRDMFLRLNYEEVITAWASQG--SPWTTGNPPKFNSDEDFLPNCMGLS 330
G E E TKR+ FLRLNYEEVIT W+ QG SPWTT NPPKFN D+D N +G S
Sbjct: 277 GYSESVITKEETKRERFLRLNYEEVITEWSRQGSPSPWTTANPPKFNCDDDSWQNLLGSS 336
Query: 331 GADEEYRNLRGHIVGR-GDEGREARVLRYREKRRTRLFAKKIRYEVRKLNAEKRPRLKGR 389
G + E R+LRG ++G GD GREARV RYREKRRTRLFAKKIRYEVRKLNAEKRPR+KGR
Sbjct: 337 GVEGEVRSLRGQLMGSGGDGGREARVSRYREKRRTRLFAKKIRYEVRKLNAEKRPRMKGR 396
Query: 390 FVKRT-CLVGATSSFPA-YH 407
FVKRT C G +SFP YH
Sbjct: 397 FVKRTACFAGGATSFPTNYH 416
>Medtr1g110870.1 | zinc finger constans-like protein | HC |
chr1:50056406-50054285 | 20130731
Length = 436
Score = 279 bits (713), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 185/446 (41%), Positives = 243/446 (54%), Gaps = 70/446 (15%)
Query: 8 AGALGAKTARACDSCLRRRARWFCGADDAFLCHGCDTLVHSANQLASRHERVRLQSASSK 67
A A+G KTARACDSC+ +RARW+C ADDAFLC CD+ VHSAN LA RHERVRL++AS K
Sbjct: 9 ANAVGGKTARACDSCITKRARWYCAADDAFLCQACDSSVHSANSLARRHERVRLKTASYK 68
Query: 68 VTTTQAWH-----SGFTRKARTPRQKNHNLALQQRFKEKVLFNNTSSVVLPLVPELGGEE 122
+ SGFT+KARTPRQ H + N +++ LVPELG +E
Sbjct: 69 SINGDEFFNCGPFSGFTKKARTPRQGKHKSKSSSSSEPA---RNNNNIPFHLVPELGFDE 125
Query: 123 QEQLVDDDESEEQLLFRVPVFEPFDGEPCIK----------------------ELKYN-- 158
+E+E QLL+RVP+F+P + C ++K N
Sbjct: 126 VNS-NSIEENEAQLLYRVPIFDPSIADLCTSPPSVCSTEGGLGVVVVASAFAPDVKNNES 184
Query: 159 ---TQNDAADDEEACNLESFCDFDVDLAEFAASVQSLLGNGVH------EDLGEVFNYTK 209
Q + ++ E + D++LAEFAA V+SLLG G+ E+LG + TK
Sbjct: 185 ESRVQLGSDNNYEMESFHGLLPSDIELAEFAADVESLLGRGLENECIGMEELGLI--DTK 242
Query: 210 EDEIAAYVIGDAATSEKAKVKDEELDTADTNRGCHLESVLDITSNEAFEWNIDSMLQEEK 269
+E + G KVK+E + + G +++++I +FE N D E
Sbjct: 243 HEESEKWKCG-------GKVKEEGEECYEVVEG---DNMMEIGKESSFELNFDYDDSHET 292
Query: 270 EAVVASNSGEREEGT-----KRDMFLRLNYEEVITAWASQGSPWTTGNPPKFNSDEDFLP 324
V GE+ E KR + L+L+Y+ VI AW SQ PWT G+ P ++DE++ P
Sbjct: 293 CEEVKEKCGEQNENNDYNKGKRKISLQLDYDAVIIAWDSQKCPWTNGDKPILDADENW-P 351
Query: 325 NCMGLSGADEEYRNLRGHIVGRG------DEGREARVLRYREKRRTRLFAKKIRYEVRKL 378
+CMG G + Y G G G D GREARV RYREKRRTRLF+KKIRYEVRKL
Sbjct: 352 DCMGTFGTEVHY--AYGEFGGYGCHPVMVDGGREARVSRYREKRRTRLFSKKIRYEVRKL 409
Query: 379 NAEKRPRLKGRFVKRTCLVGATSSFP 404
NAEKRPR+KGRFVKR A +FP
Sbjct: 410 NAEKRPRMKGRFVKRASF--AVPTFP 433
>Medtr5g072780.1 | CCT motif protein | HC | chr5:30979956-30981595 |
20130731
Length = 217
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 53/104 (50%), Positives = 67/104 (64%), Gaps = 13/104 (12%)
Query: 290 LRLNYEEVITAWASQGSPWTTGNPPKFNSDEDFLPNCMGLSGADEEYRNLRGHIVGRGDE 349
L LNY+EV+ AW+++GS W F+S + + MG EE R
Sbjct: 126 LNLNYQEVLDAWSNRGSLWANDCSLSFSSSNN--GSYMGEVPILEEER-----------A 172
Query: 350 GREARVLRYREKRRTRLFAKKIRYEVRKLNAEKRPRLKGRFVKR 393
REA VLRY+EKR+ RLF+KKIRY+VRKLNA+KRPR+KGRFVKR
Sbjct: 173 RREASVLRYKEKRQNRLFSKKIRYQVRKLNADKRPRIKGRFVKR 216
>Medtr7g032240.1 | CCT motif protein | HC | chr7:11334447-11330064 |
20130731
Length = 352
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 77/135 (57%), Gaps = 32/135 (23%)
Query: 288 MFLRLNYEEVITAWASQGSPWTTG-------NPPKFNSDEDFLPNCM------------- 327
+ L+L+++ ++ AW+ +GS + G P FN LPN +
Sbjct: 220 LSLKLDHDGILNAWSDKGSLYVDGCDEAPQTVPDLFNGG--ILPNVLWDGYGCDVNGNTW 277
Query: 328 ----GLSGADEEYRNLRGHIVGRGDEG-----REARVLRYREKRRTRLFAKKIRYEVRKL 378
G+ GA+ ++ + + + G REA +LRY+EKR++RLFAK+IRYEVRKL
Sbjct: 278 KVPEGV-GANNNNVKVKEEMGWKQEMGWKLGQREASLLRYKEKRQSRLFAKRIRYEVRKL 336
Query: 379 NAEKRPRLKGRFVKR 393
NAEKRPR+KGRFVKR
Sbjct: 337 NAEKRPRMKGRFVKR 351
>Medtr4g127420.1 | import apparatus protein | HC |
chr4:52887578-52890899 | 20130731
Length = 379
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 9/95 (9%)
Query: 293 NYEEVITAWASQGSPWTTGNPPKFNSDEDFLPNCMGLSGADEEYRNLRGHIVGRGDEGRE 352
NY+ V AW+ +G+P+ +P S D LS D + N G G RE
Sbjct: 293 NYDGVRKAWSDRGTPFADDSPVSDASGNDV---NARLSQIDLLWEN------GGGSGVRE 343
Query: 353 ARVLRYREKRRTRLFAKKIRYEVRKLNAEKRPRLK 387
A V+RY+EKRRTRL +KKIRY+VRK+NA++RPR+K
Sbjct: 344 ASVMRYKEKRRTRLISKKIRYQVRKVNADRRPRMK 378
>Medtr7g018170.1 | zinc finger constans-like protein | HC |
chr7:5837191-5833561 | 20130731
Length = 396
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 35/44 (79%)
Query: 351 REARVLRYREKRRTRLFAKKIRYEVRKLNAEKRPRLKGRFVKRT 394
REARVLRYREK++TR F K IRY RK AE RPR+KGRF KRT
Sbjct: 327 REARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRT 370
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 36/58 (62%), Gaps = 4/58 (6%)
Query: 2 TSDMRGAGALGAKTARACDSCLRRRARWFCGADDAFLCHGCDTLVHSANQLASRHERV 59
T+ +R AG AR CD+C FC AD A+LC CD +H+AN++ASRHERV
Sbjct: 13 TATVRSAGTW----ARTCDTCRSAPCAVFCRADSAYLCAACDARIHAANRVASRHERV 66
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 29/43 (67%)
Query: 19 CDSCLRRRARWFCGADDAFLCHGCDTLVHSANQLASRHERVRL 61
C++C R A + C AD A LC CD +HSAN LASRH+RV +
Sbjct: 69 CEACERAPAAFLCKADAASLCSTCDADIHSANPLASRHQRVPI 111
>Medtr3g105710.1 | zinc finger constans-like protein | HC |
chr3:48758302-48759914 | 20130731
Length = 290
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 38/53 (71%)
Query: 351 REARVLRYREKRRTRLFAKKIRYEVRKLNAEKRPRLKGRFVKRTCLVGATSSF 403
REARV+RYREKR+ R F K IRY RK AE RPR+KGRF KRT V + S +
Sbjct: 232 REARVMRYREKRKNRRFEKTIRYASRKAYAETRPRIKGRFAKRTDAVDSISGY 284
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 31/46 (67%)
Query: 16 ARACDSCLRRRARWFCGADDAFLCHGCDTLVHSANQLASRHERVRL 61
++ CDSC A +C D AFLC CD+ VH+AN+LASRH RV L
Sbjct: 3 SKLCDSCKSATATLYCRPDSAFLCGACDSKVHAANKLASRHPRVTL 48
>Medtr4g128930.1 | zinc finger constans-like protein | HC |
chr4:53656301-53658369 | 20130731
Length = 375
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/44 (70%), Positives = 34/44 (77%)
Query: 351 REARVLRYREKRRTRLFAKKIRYEVRKLNAEKRPRLKGRFVKRT 394
REARV+RYREKR+ R F K IRY RK AE RPR+KGRF KRT
Sbjct: 298 REARVMRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRT 341
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 37/57 (64%), Gaps = 3/57 (5%)
Query: 5 MRGAGALGAKTARACDSCLRRRARWFCGADDAFLCHGCDTLVHSANQLASRHERVRL 61
+RG ++ K CDSC A FC +D AFLC CD+ +HSAN+L+SRHERV +
Sbjct: 11 LRGGWSVPPKL---CDSCKLTPAALFCRSDSAFLCINCDSTIHSANKLSSRHERVWM 64
>Medtr1g013450.1 | zinc finger constans-like protein | HC |
chr1:3420903-3419850 | 20130731
Length = 316
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/44 (68%), Positives = 34/44 (77%)
Query: 351 REARVLRYREKRRTRLFAKKIRYEVRKLNAEKRPRLKGRFVKRT 394
REARV+RYREKR+ R F K IRY RK AE RPR+KGRF KR+
Sbjct: 255 REARVMRYREKRKNRRFEKTIRYASRKAYAETRPRIKGRFAKRS 298
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 32/45 (71%)
Query: 17 RACDSCLRRRARWFCGADDAFLCHGCDTLVHSANQLASRHERVRL 61
+ CDSC +A FC +D AFLC CD+ +H+AN+LASRH RV L
Sbjct: 4 KLCDSCKSTKATLFCRSDSAFLCLTCDSNIHAANKLASRHHRVTL 48
>Medtr2g099010.1 | salt tolerance-like protein | HC |
chr2:42410072-42407677 | 20130731
Length = 243
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 35/50 (70%)
Query: 19 CDSCLRRRARWFCGADDAFLCHGCDTLVHSANQLASRHERVRLQSASSKV 68
CD C + A C AD+A LC CD VH+AN+LAS+H+R+ LQS S+K+
Sbjct: 5 CDVCEKAPATMICCADEAALCAKCDIEVHAANKLASKHQRIHLQSLSNKL 54
>Medtr2g099010.2 | salt tolerance-like protein | HC |
chr2:42410006-42407677 | 20130731
Length = 242
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 35/50 (70%)
Query: 19 CDSCLRRRARWFCGADDAFLCHGCDTLVHSANQLASRHERVRLQSASSKV 68
CD C + A C AD+A LC CD VH+AN+LAS+H+R+ LQS S+K+
Sbjct: 5 CDVCEKAPATMICCADEAALCAKCDIEVHAANKLASKHQRIHLQSLSNKL 54
>Medtr3g117320.1 | salt tolerance-like protein | HC |
chr3:54880282-54882115 | 20130731
Length = 227
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 32/49 (65%)
Query: 19 CDSCLRRRARWFCGADDAFLCHGCDTLVHSANQLASRHERVRLQSASSK 67
CD C + A FC +D+A LCHGCD +H AN+LA++H R L +SK
Sbjct: 5 CDVCEKAEATMFCPSDEAALCHGCDHTIHRANKLATKHTRFSLVHLNSK 53
>Medtr7g118260.3 | PRR response regulator | HC |
chr7:49081893-49086030 | 20130731
Length = 510
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 33/43 (76%)
Query: 351 REARVLRYREKRRTRLFAKKIRYEVRKLNAEKRPRLKGRFVKR 393
REA + ++R KR+ R + KK+RYE RK AE RPR+KG+FV++
Sbjct: 455 REAALTKFRLKRKDRCYDKKVRYESRKRQAENRPRVKGQFVRQ 497
>Medtr4g067320.1 | salt tolerance-like protein | HC |
chr4:25416059-25413232 | 20130731
Length = 240
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 34/50 (68%)
Query: 19 CDSCLRRRARWFCGADDAFLCHGCDTLVHSANQLASRHERVRLQSASSKV 68
CD C + A C AD+A LC CD VH+AN+LAS+H+R+ LQ S+K+
Sbjct: 5 CDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLQCLSNKL 54
>Medtr4g067320.2 | salt tolerance-like protein | HC |
chr4:25416062-25413348 | 20130731
Length = 239
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 34/50 (68%)
Query: 19 CDSCLRRRARWFCGADDAFLCHGCDTLVHSANQLASRHERVRLQSASSKV 68
CD C + A C AD+A LC CD VH+AN+LAS+H+R+ LQ S+K+
Sbjct: 5 CDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLQCLSNKL 54
>Medtr7g118260.4 | PRR response regulator | HC |
chr7:49081893-49086030 | 20130731
Length = 426
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 33/43 (76%)
Query: 351 REARVLRYREKRRTRLFAKKIRYEVRKLNAEKRPRLKGRFVKR 393
REA + ++R KR+ R + KK+RYE RK AE RPR+KG+FV++
Sbjct: 371 REAALTKFRLKRKDRCYDKKVRYESRKRQAENRPRVKGQFVRQ 413
>Medtr3g092780.1 | PRR response regulator | HC |
chr3:42411882-42416036 | 20130731
Length = 685
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 52/96 (54%), Gaps = 15/96 (15%)
Query: 311 GNPPKFNSDEDFLPNCMGLSGADEEYRNLRGHIVGRG------DEG-------REARVLR 357
GN FNS + NC G SG E+ R V G + G REA + +
Sbjct: 580 GNASNFNSI-GYGSNC-GSSGNVEQVATFRTAAVSEGKNEELTNSGYSHRAMLREAALNK 637
Query: 358 YREKRRTRLFAKKIRYEVRKLNAEKRPRLKGRFVKR 393
+R KR+ R + KK+RYE RK AE+RPR+KG+FV++
Sbjct: 638 FRLKRKERCYEKKVRYESRKKLAEQRPRVKGQFVRQ 673
>Medtr3g092780.2 | PRR response regulator | HC |
chr3:42411881-42416018 | 20130731
Length = 684
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 52/96 (54%), Gaps = 15/96 (15%)
Query: 311 GNPPKFNSDEDFLPNCMGLSGADEEYRNLRGHIVGRG------DEG-------REARVLR 357
GN FNS + NC G SG E+ R V G + G REA + +
Sbjct: 579 GNASNFNSI-GYGSNC-GSSGNVEQVATFRTAAVSEGKNEELTNSGYSHRAMLREAALNK 636
Query: 358 YREKRRTRLFAKKIRYEVRKLNAEKRPRLKGRFVKR 393
+R KR+ R + KK+RYE RK AE+RPR+KG+FV++
Sbjct: 637 FRLKRKERCYEKKVRYESRKKLAEQRPRVKGQFVRQ 672
>Medtr3g092780.4 | PRR response regulator | HC |
chr3:42411907-42416036 | 20130731
Length = 644
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 52/96 (54%), Gaps = 15/96 (15%)
Query: 311 GNPPKFNSDEDFLPNCMGLSGADEEYRNLRGHIVGRG------DEG-------REARVLR 357
GN FNS + NC G SG E+ R V G + G REA + +
Sbjct: 539 GNASNFNSI-GYGSNC-GSSGNVEQVATFRTAAVSEGKNEELTNSGYSHRAMLREAALNK 596
Query: 358 YREKRRTRLFAKKIRYEVRKLNAEKRPRLKGRFVKR 393
+R KR+ R + KK+RYE RK AE+RPR+KG+FV++
Sbjct: 597 FRLKRKERCYEKKVRYESRKKLAEQRPRVKGQFVRQ 632
>Medtr3g092780.3 | PRR response regulator | HC |
chr3:42411881-42416018 | 20130731
Length = 643
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 52/96 (54%), Gaps = 15/96 (15%)
Query: 311 GNPPKFNSDEDFLPNCMGLSGADEEYRNLRGHIVGRG------DEG-------REARVLR 357
GN FNS + NC G SG E+ R V G + G REA + +
Sbjct: 538 GNASNFNSI-GYGSNC-GSSGNVEQVATFRTAAVSEGKNEELTNSGYSHRAMLREAALNK 595
Query: 358 YREKRRTRLFAKKIRYEVRKLNAEKRPRLKGRFVKR 393
+R KR+ R + KK+RYE RK AE+RPR+KG+FV++
Sbjct: 596 FRLKRKERCYEKKVRYESRKKLAEQRPRVKGQFVRQ 631
>Medtr3g113070.1 | salt tolerance-like protein | HC |
chr3:52823631-52824513 | 20130731
Length = 224
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 31/48 (64%)
Query: 19 CDSCLRRRARWFCGADDAFLCHGCDTLVHSANQLASRHERVRLQSASS 66
CD C +R+A FC AD+A LC CD VH AN+LAS+H R L +S
Sbjct: 5 CDVCNKRQASLFCTADEAALCSTCDHRVHHANKLASKHRRFSLDHPNS 52
>Medtr7g083540.1 | zinc finger constans-like protein | HC |
chr7:32135506-32130746 | 20130731
Length = 390
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 36/56 (64%), Gaps = 5/56 (8%)
Query: 339 LRGHIVGRGDEGREARVLRYREKRRTRLFAKKIRYEVRKLNAEKRPRLKGRFVKRT 394
L H RGD +LRY+EK++TR F K IRYE RK A+ R R++GRFVK T
Sbjct: 334 LEEHTRNRGDA-----MLRYKEKKKTRRFDKHIRYESRKARADTRKRVRGRFVKAT 384
>Medtr7g118260.1 | PRR response regulator | HC |
chr7:49081893-49086030 | 20130731
Length = 596
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 33/43 (76%)
Query: 351 REARVLRYREKRRTRLFAKKIRYEVRKLNAEKRPRLKGRFVKR 393
REA + ++R KR+ R + KK+RYE RK AE RPR+KG+FV++
Sbjct: 541 REAALTKFRLKRKDRCYDKKVRYESRKRQAENRPRVKGQFVRQ 583
>Medtr2g088900.1 | zinc finger constans-like protein | HC |
chr2:37490665-37495477 | 20130731
Length = 521
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 345 GRGDEGREARVLRYREKRRTRLFAKKIRYEVRKLNAEKRPRLKGRFVK 392
G + R+ +RY+EK++TR F K+IRY RK A+ R R+KGRFVK
Sbjct: 460 GACPQARDKAKMRYQEKKKTRTFGKQIRYASRKARADTRKRVKGRFVK 507
>Medtr7g118260.2 | PRR response regulator | HC |
chr7:49081784-49086030 | 20130731
Length = 559
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 33/43 (76%)
Query: 351 REARVLRYREKRRTRLFAKKIRYEVRKLNAEKRPRLKGRFVKR 393
REA + ++R KR+ R + KK+RYE RK AE RPR+KG+FV++
Sbjct: 504 REAALTKFRLKRKDRCYDKKVRYESRKRQAENRPRVKGQFVRQ 546
>Medtr4g108880.2 | two-component response regulator-like APRR7
protein | HC | chr4:45127441-45132438 | 20130731
Length = 585
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 35/43 (81%)
Query: 351 REARVLRYREKRRTRLFAKKIRYEVRKLNAEKRPRLKGRFVKR 393
REA ++++R+KR+ R F KKIRY RK AE+RPR++G+FV++
Sbjct: 505 REAALMKFRQKRKERCFDKKIRYVNRKQLAERRPRVRGQFVRK 547
>Medtr4g108880.1 | two-component response regulator-like APRR7
protein | HC | chr4:45127441-45132453 | 20130731
Length = 585
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 35/43 (81%)
Query: 351 REARVLRYREKRRTRLFAKKIRYEVRKLNAEKRPRLKGRFVKR 393
REA ++++R+KR+ R F KKIRY RK AE+RPR++G+FV++
Sbjct: 505 REAALMKFRQKRKERCFDKKIRYVNRKQLAERRPRVRGQFVRK 547
>Medtr7g108150.1 | zinc finger constans-like protein | HC |
chr7:43981894-43978299 | 20130731
Length = 372
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 33/42 (78%)
Query: 351 REARVLRYREKRRTRLFAKKIRYEVRKLNAEKRPRLKGRFVK 392
R++ +LRY++K++TR + K IRYE RK+ AE R R+KGRF K
Sbjct: 328 RDSALLRYKQKKKTRRYDKHIRYESRKVRAESRTRVKGRFAK 369
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 44/100 (44%), Gaps = 2/100 (2%)
Query: 14 KTARACDSCLRRRARWFCGADDAFLCHGCDTLVHSANQLASRHERVRLQSASSKVTTTQA 73
K R CD C A +C AD A LC CD VHS NQL S+H R + + T
Sbjct: 15 KLVRPCDYCGHSNAVIYCRADSAKLCFSCDREVHSTNQLFSKHTRSLICDSCDDSPATIL 74
Query: 74 WHSGFTRKARTPRQKNHNLALQQRFKEKVL--FNNTSSVV 111
+ + + +NHNL+L + + L F SV
Sbjct: 75 CSTESSVFCQNCDWENHNLSLSSPHERRSLEGFTGCPSVT 114
>Medtr4g061360.5 | PRR response regulator | HC |
chr4:22682971-22690792 | 20130731
Length = 796
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 34/43 (79%)
Query: 351 REARVLRYREKRRTRLFAKKIRYEVRKLNAEKRPRLKGRFVKR 393
REA + ++R+KR+ R F KK+RY RK A++RPR++G+FVK+
Sbjct: 721 REAALTKFRQKRKERCFDKKVRYHSRKKLADQRPRVRGQFVKQ 763
>Medtr4g061360.1 | PRR response regulator | HC |
chr4:22682971-22690792 | 20130731
Length = 796
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 34/43 (79%)
Query: 351 REARVLRYREKRRTRLFAKKIRYEVRKLNAEKRPRLKGRFVKR 393
REA + ++R+KR+ R F KK+RY RK A++RPR++G+FVK+
Sbjct: 721 REAALTKFRQKRKERCFDKKVRYHSRKKLADQRPRVRGQFVKQ 763
>Medtr4g061360.2 | PRR response regulator | HC |
chr4:22682971-22690792 | 20130731
Length = 796
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 34/43 (79%)
Query: 351 REARVLRYREKRRTRLFAKKIRYEVRKLNAEKRPRLKGRFVKR 393
REA + ++R+KR+ R F KK+RY RK A++RPR++G+FVK+
Sbjct: 721 REAALTKFRQKRKERCFDKKVRYHSRKKLADQRPRVRGQFVKQ 763
>Medtr4g061360.3 | PRR response regulator | HC |
chr4:22682971-22690792 | 20130731
Length = 796
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 34/43 (79%)
Query: 351 REARVLRYREKRRTRLFAKKIRYEVRKLNAEKRPRLKGRFVKR 393
REA + ++R+KR+ R F KK+RY RK A++RPR++G+FVK+
Sbjct: 721 REAALTKFRQKRKERCFDKKVRYHSRKKLADQRPRVRGQFVKQ 763
>Medtr4g061360.4 | PRR response regulator | HC |
chr4:22682971-22690791 | 20130731
Length = 796
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 34/43 (79%)
Query: 351 REARVLRYREKRRTRLFAKKIRYEVRKLNAEKRPRLKGRFVKR 393
REA + ++R+KR+ R F KK+RY RK A++RPR++G+FVK+
Sbjct: 721 REAALTKFRQKRKERCFDKKVRYHSRKKLADQRPRVRGQFVKQ 763
>Medtr1g023260.3 | salt tolerance-like protein | HC |
chr1:7448796-7450656 | 20130731
Length = 273
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 31/49 (63%)
Query: 19 CDSCLRRRARWFCGADDAFLCHGCDTLVHSANQLASRHERVRLQSASSK 67
CD C + A FC AD+A LC CD VH AN+LAS+H R+ L + + K
Sbjct: 5 CDVCNKNEASLFCTADEAALCIDCDHRVHHANKLASKHHRLALHNPTPK 53
>Medtr1g023260.1 | salt tolerance-like protein | HC |
chr1:7448740-7450606 | 20130731
Length = 273
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 31/49 (63%)
Query: 19 CDSCLRRRARWFCGADDAFLCHGCDTLVHSANQLASRHERVRLQSASSK 67
CD C + A FC AD+A LC CD VH AN+LAS+H R+ L + + K
Sbjct: 5 CDVCNKNEASLFCTADEAALCIDCDHRVHHANKLASKHHRLALHNPTPK 53
>Medtr5g021580.1 | salt tolerance-like protein | HC |
chr5:8355298-8352152 | 20130731
Length = 185
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 29/47 (61%)
Query: 19 CDSCLRRRARWFCGADDAFLCHGCDTLVHSANQLASRHERVRLQSAS 65
CD+C A FC AD+A LC CD VH N+LASRH RV L S S
Sbjct: 5 CDACESAAAIVFCAADEAALCRACDEKVHMCNKLASRHVRVGLASPS 51
>Medtr5g021580.2 | salt tolerance-like protein | HC |
chr5:8355298-8352152 | 20130731
Length = 190
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 29/47 (61%)
Query: 19 CDSCLRRRARWFCGADDAFLCHGCDTLVHSANQLASRHERVRLQSAS 65
CD+C A FC AD+A LC CD VH N+LASRH RV L S S
Sbjct: 5 CDACESAAAIVFCAADEAALCRACDEKVHMCNKLASRHVRVGLASPS 51
>Medtr3g037390.2 | timing of cab expression 1/PRR response regulator
| HC | chr3:13734998-13728441 | 20130731
Length = 471
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 34/43 (79%)
Query: 351 REARVLRYREKRRTRLFAKKIRYEVRKLNAEKRPRLKGRFVKR 393
REA ++++R+K++ R F KKIRY RK AE+RPR++G+FV +
Sbjct: 394 REAALIKFRQKKKERCFDKKIRYVNRKQLAERRPRVRGQFVSK 436
>Medtr4g071200.1 | salt tolerance-like protein | HC |
chr4:26845686-26847561 | 20130731
Length = 224
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 19 CDSCLRRRARWFCGADDAFLCHGCDTLVHSANQLASRHERVRLQSASSKVT 69
CD+C ++ A FC AD+A LC+ CD +H AN+++++H+R L +SK T
Sbjct: 5 CDACHKQEASLFCPADEAALCNQCDRNIHYANKVSAKHKRFTLHHPTSKDT 55
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 53/125 (42%), Gaps = 9/125 (7%)
Query: 13 AKTARACDSCLRRRARWFCGADDAFLCHGCDTLVHSANQLASRHERVRL-------QSAS 65
+K CD C RRA FC D A LC CD +H N+L +H R L S+
Sbjct: 52 SKDTPLCDICKERRAYLFCKEDRAILCRECDIPIHEINKLTKQHNRFLLTGVKIGASSSC 111
Query: 66 SKVTTTQAWHSGFTRKARTPRQKNHNLALQQRFKEKVLFN--NTSSVVLPLVPELGGEEQ 123
S T + + + +N Q FKE ++ + +TSS+ L+ + G
Sbjct: 112 SNPTISNGSELRTSSPRPSSFSSENNSCSQSSFKENMVCDTVSTSSISEYLIETIPGYCM 171
Query: 124 EQLVD 128
E L D
Sbjct: 172 EDLFD 176
>Medtr1g023260.4 | salt tolerance-like protein | HC |
chr1:7448796-7450656 | 20130731
Length = 193
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 31/49 (63%)
Query: 19 CDSCLRRRARWFCGADDAFLCHGCDTLVHSANQLASRHERVRLQSASSK 67
CD C + A FC AD+A LC CD VH AN+LAS+H R+ L + + K
Sbjct: 5 CDVCNKNEASLFCTADEAALCIDCDHRVHHANKLASKHHRLALHNPTPK 53
>Medtr3g037390.1 | timing of cab expression 1/PRR response regulator
| HC | chr3:13734998-13728441 | 20130731
Length = 575
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 34/43 (79%)
Query: 351 REARVLRYREKRRTRLFAKKIRYEVRKLNAEKRPRLKGRFVKR 393
REA ++++R+K++ R F KKIRY RK AE+RPR++G+FV +
Sbjct: 498 REAALIKFRQKKKERCFDKKIRYVNRKQLAERRPRVRGQFVSK 540
>Medtr2g073370.1 | B-box type zinc finger protein | HC |
chr2:31094030-31097240 | 20130731
Length = 294
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 34/50 (68%)
Query: 19 CDSCLRRRARWFCGADDAFLCHGCDTLVHSANQLASRHERVRLQSASSKV 68
C+ C A+ C AD+A LC CD VH+AN+LAS+H+RV L ++SS +
Sbjct: 5 CNVCEGAEAKVLCCADEAALCWECDEKVHAANKLASKHQRVPLSASSSHM 54
>Medtr3g082630.1 | B-box type zinc finger protein | HC |
chr3:37275432-37271508 | 20130731
Length = 411
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 32/42 (76%)
Query: 351 REARVLRYREKRRTRLFAKKIRYEVRKLNAEKRPRLKGRFVK 392
R + V+RY+EK++TR F K++RY RK A+ R R+KGRFVK
Sbjct: 354 RCSAVMRYKEKKKTRKFDKRVRYASRKERADVRRRVKGRFVK 395
>Medtr3g082630.2 | B-box type zinc finger protein | HC |
chr3:37275432-37271508 | 20130731
Length = 411
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 32/42 (76%)
Query: 351 REARVLRYREKRRTRLFAKKIRYEVRKLNAEKRPRLKGRFVK 392
R + V+RY+EK++TR F K++RY RK A+ R R+KGRFVK
Sbjct: 354 RCSAVMRYKEKKKTRKFDKRVRYASRKERADVRRRVKGRFVK 395
>Medtr1g073350.1 | CCT motif protein | HC | chr1:32553600-32555963 |
20130731
Length = 414
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 31/44 (70%)
Query: 349 EGREARVLRYREKRRTRLFAKKIRYEVRKLNAEKRPRLKGRFVK 392
E R+ ++ RY +KR R F+KKI+Y RK A+ RPR++GRF K
Sbjct: 314 EQRKEKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAK 357
>Medtr8g024260.1 | PRR response regulator | LC |
chr8:8900931-8895233 | 20130731
Length = 640
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 33/44 (75%)
Query: 351 REARVLRYREKRRTRLFAKKIRYEVRKLNAEKRPRLKGRFVKRT 394
REA + ++R KR+ R F KK+RY+ RK AE+R R+KG+FV++
Sbjct: 584 REAALTKFRLKRKERCFEKKVRYQSRKKQAEQRLRVKGQFVRKV 627
>Medtr1g044785.1 | CCT motif protein | HC | chr1:16921077-16923253 |
20130731
Length = 230
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 31/44 (70%)
Query: 349 EGREARVLRYREKRRTRLFAKKIRYEVRKLNAEKRPRLKGRFVK 392
E R+ ++ RY +KR R F+KKI+Y RK A+ RPR++GRF K
Sbjct: 132 EQRKEKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAK 175
>Medtr4g093730.1 | GATA transcription factor | HC |
chr4:37055500-37051502 | 20130731
Length = 334
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 7/66 (10%)
Query: 325 NCMGLSGADEEYRNLRGHIVGRGDEGREARVLRYREKRRTRLFAKKIRYEVRKLNAEKRP 384
NC + G ++ +RN + V R R A ++R+REKR+ R F KKIRY RK AE+
Sbjct: 89 NCRDIWGKNDPFRNSK---VSR----RSASLVRFREKRKERCFEKKIRYTCRKEVAERMQ 141
Query: 385 RLKGRF 390
R G+F
Sbjct: 142 RKNGQF 147