Miyakogusa Predicted Gene

Lj4g3v3096060.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v3096060.1 tr|G7L912|G7L912_MEDTR Protein CASP OS=Medicago
truncatula GN=MTR_8g103950 PE=4 SV=1,88.29,0,coiled-coil,NULL;
seg,NULL; CASP,NULL; CCAAT DISPLACEMENT
PROTEIN-RELATED,NULL,CUFF.52253.1
         (350 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g103950.2 | CASP carboxy-terminal protein | HC | chr8:4376...   563   e-161
Medtr8g103950.1 | CASP carboxy-terminal protein | HC | chr8:4376...   561   e-160

>Medtr8g103950.2 | CASP carboxy-terminal protein | HC |
           chr8:43763207-43755474 | 20130731
          Length = 574

 Score =  563 bits (1451), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 289/350 (82%), Positives = 303/350 (86%), Gaps = 1/350 (0%)

Query: 1   MEAPQGGSERDKPTSPIITVVSAFWKDFDLEKEKSILDEQGLRIAENQENSQKNRRKLAE 60
           ME+P  GSERD   SPI +VVSAFWKDFDLEKEKS+LDEQGLRIAENQENSQKNRRKLAE
Sbjct: 1   MESPPSGSERDTTNSPI-SVVSAFWKDFDLEKEKSVLDEQGLRIAENQENSQKNRRKLAE 59

Query: 61  STRNFKKASPEDKLNLFNTLLRGYQEEVDNLTKRAKFGENAFLNIYQKLYEAPDPYPALA 120
           STRNFKKASPEDK +LFN LL+GYQEEVDNLTKRAKFGENAFLNIYQKLYEAPDPYPALA
Sbjct: 60  STRNFKKASPEDKSSLFNALLKGYQEEVDNLTKRAKFGENAFLNIYQKLYEAPDPYPALA 119

Query: 121 SIAEQDLKLSELESENRKMKVELEEFRTEATHLKNQQATIXXXXXXXXXXXXXXXXXXXX 180
           S+AEQDLKLSELESENRKMKVELEEFRTEATHLKNQQATI                    
Sbjct: 120 SVAEQDLKLSELESENRKMKVELEEFRTEATHLKNQQATIRRLEERSRQLEQQMEEKVKE 179

Query: 181 XXXXXQRNLAEENQKTLEILKEREQLLQDQLQSAKESVSTMQKLHELAQNKLFELRAQSD 240
                 RNLAEENQKTLEILKEREQLLQDQLQSAKESVS M+KLHELAQN+LFELRAQS+
Sbjct: 180 IVEIKHRNLAEENQKTLEILKEREQLLQDQLQSAKESVSNMKKLHELAQNQLFELRAQSE 239

Query: 241 EERAAKQAEVNLLMDEVERAQTMLLGLEREKGVLRSQLQTTNQDGEIKKSDNSDSTVALE 300
           EERAAKQAE NLLMDEVERAQTMLLGLEREKGVLRSQLQT N+D E KKSDN DS  ALE
Sbjct: 240 EERAAKQAEANLLMDEVERAQTMLLGLEREKGVLRSQLQTANEDSETKKSDNLDSNNALE 299

Query: 301 NSLIAKDRQISELNMELHNIETTLSNEREEHMKDVKKFTALLNEKVISQV 350
           NSLIAK++ ISELNMELHNIETTLSNEREEH+ DVKKFTA+LNEK  S V
Sbjct: 300 NSLIAKEKLISELNMELHNIETTLSNEREEHINDVKKFTAMLNEKEASIV 349


>Medtr8g103950.1 | CASP carboxy-terminal protein | HC |
           chr8:43763207-43753805 | 20130731
          Length = 683

 Score =  561 bits (1445), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 289/350 (82%), Positives = 303/350 (86%), Gaps = 1/350 (0%)

Query: 1   MEAPQGGSERDKPTSPIITVVSAFWKDFDLEKEKSILDEQGLRIAENQENSQKNRRKLAE 60
           ME+P  GSERD   SPI +VVSAFWKDFDLEKEKS+LDEQGLRIAENQENSQKNRRKLAE
Sbjct: 1   MESPPSGSERDTTNSPI-SVVSAFWKDFDLEKEKSVLDEQGLRIAENQENSQKNRRKLAE 59

Query: 61  STRNFKKASPEDKLNLFNTLLRGYQEEVDNLTKRAKFGENAFLNIYQKLYEAPDPYPALA 120
           STRNFKKASPEDK +LFN LL+GYQEEVDNLTKRAKFGENAFLNIYQKLYEAPDPYPALA
Sbjct: 60  STRNFKKASPEDKSSLFNALLKGYQEEVDNLTKRAKFGENAFLNIYQKLYEAPDPYPALA 119

Query: 121 SIAEQDLKLSELESENRKMKVELEEFRTEATHLKNQQATIXXXXXXXXXXXXXXXXXXXX 180
           S+AEQDLKLSELESENRKMKVELEEFRTEATHLKNQQATI                    
Sbjct: 120 SVAEQDLKLSELESENRKMKVELEEFRTEATHLKNQQATIRRLEERSRQLEQQMEEKVKE 179

Query: 181 XXXXXQRNLAEENQKTLEILKEREQLLQDQLQSAKESVSTMQKLHELAQNKLFELRAQSD 240
                 RNLAEENQKTLEILKEREQLLQDQLQSAKESVS M+KLHELAQN+LFELRAQS+
Sbjct: 180 IVEIKHRNLAEENQKTLEILKEREQLLQDQLQSAKESVSNMKKLHELAQNQLFELRAQSE 239

Query: 241 EERAAKQAEVNLLMDEVERAQTMLLGLEREKGVLRSQLQTTNQDGEIKKSDNSDSTVALE 300
           EERAAKQAE NLLMDEVERAQTMLLGLEREKGVLRSQLQT N+D E KKSDN DS  ALE
Sbjct: 240 EERAAKQAEANLLMDEVERAQTMLLGLEREKGVLRSQLQTANEDSETKKSDNLDSNNALE 299

Query: 301 NSLIAKDRQISELNMELHNIETTLSNEREEHMKDVKKFTALLNEKVISQV 350
           NSLIAK++ ISELNMELHNIETTLSNEREEH+ DVKKFTA+LNEK  S V
Sbjct: 300 NSLIAKEKLISELNMELHNIETTLSNEREEHINDVKKFTAMLNEKEASIV 349