Miyakogusa Predicted Gene

Lj4g3v3093960.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v3093960.1 Non Characterized Hit- tr|C5WV23|C5WV23_SORBI
Putative uncharacterized protein Sb01g003340
OS=Sorghu,58.57,8e-18,HMA, heavy metal-associated domain,Heavy
metal-associated domain, HMA; HMA_2,Heavy metal-associated
,CUFF.52244.1
         (133 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g086020.1 | heavy metal transport/detoxification superfami...   224   1e-59
Medtr8g103820.1 | heavy metal transport/detoxification superfami...   217   3e-57
Medtr4g062450.1 | heavy-metal-associated domain protein | HC | c...    89   2e-18
Medtr1g067560.1 | copper chaperone | HC | chr1:29144569-29146076...    86   1e-17
Medtr7g100450.1 | copper chaperone | HC | chr7:40453042-40454776...    82   2e-16
Medtr1g082650.1 | heavy-metal-associated domain protein | HC | c...    55   2e-08
Medtr7g013660.1 | copper chaperone | HC | chr7:3949006-3946807 |...    54   3e-08
Medtr1g092670.1 | copper chaperone | HC | chr1:41728751-41726269...    53   8e-08
Medtr2g026685.2 | heavy metal transport/detoxification superfami...    50   8e-07
Medtr2g026685.1 | heavy metal transport/detoxification superfami...    50   8e-07
Medtr2g026685.3 | heavy metal transport/detoxification superfami...    50   8e-07
Medtr4g094278.1 | targeted copper chaperone protein | HC | chr4:...    49   1e-06
Medtr4g117140.1 | heavy metal-associated domain protein | LC | c...    49   1e-06
Medtr4g117220.1 | heavy metal-associated domain protein | HC | c...    49   1e-06
Medtr2g022250.1 | heavy metal transport/detoxification domain pr...    48   2e-06
Medtr6g026890.1 | heavy metal transport/detoxification superfami...    48   3e-06
Medtr8g096700.1 | heavy metal-associated domain protein | HC | c...    48   3e-06
Medtr1g083310.1 | heavy-metal-associated domain protein | HC | c...    47   7e-06
Medtr5g055020.1 | heavy metal transport/detoxification superfami...    46   8e-06
Medtr2g022240.1 | heavy metal transport/detoxification domain pr...    46   8e-06

>Medtr6g086020.1 | heavy metal transport/detoxification superfamily
           protein | HC | chr6:32213294-32211767 | 20130731
          Length = 135

 Score =  224 bits (572), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 107/129 (82%), Positives = 117/129 (90%)

Query: 1   MGKIGRMLDTFCLSSCSNPCFCVNSIEFEDEFESKPLIANGSDHKLRLKDVVAGKQTLGF 60
           MGK+GRML+TFCLSSCS  CFC+N+ EFEDEFE K LI++ SDHKLRLKDVVAGKQTL F
Sbjct: 1   MGKLGRMLETFCLSSCSKTCFCMNTTEFEDEFEKKSLISSESDHKLRLKDVVAGKQTLAF 60

Query: 61  QLKPKIVILRVSMHCHACARKVEKHISKLEGVSSYKVDLVNKTVVVIGDILPMEVLESVS 120
           QLKP+IVILRVSMHCH CARKVEKHISKLEGVSSYKVDL  K VVV+GDILP EVLESVS
Sbjct: 61  QLKPQIVILRVSMHCHGCARKVEKHISKLEGVSSYKVDLDTKMVVVMGDILPFEVLESVS 120

Query: 121 KVKNAQLWN 129
           KVKNA++WN
Sbjct: 121 KVKNAEIWN 129


>Medtr8g103820.1 | heavy metal transport/detoxification superfamily
           protein | HC | chr8:43696708-43698448 | 20130731
          Length = 132

 Score =  217 bits (552), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 107/132 (81%), Positives = 115/132 (87%), Gaps = 1/132 (0%)

Query: 1   MGKIGRMLDTFCLSSCSNPCFCVNSIEFEDEFESKPLIANG-SDHKLRLKDVVAGKQTLG 59
           MGK+G+MLD FCLSS SN CFC+NSI F+DEFESKPLIA+   D KL LKDVVAGKQTL 
Sbjct: 1   MGKLGKMLDNFCLSSGSNSCFCLNSINFDDEFESKPLIASDRDDQKLLLKDVVAGKQTLA 60

Query: 60  FQLKPKIVILRVSMHCHACARKVEKHISKLEGVSSYKVDLVNKTVVVIGDILPMEVLESV 119
           FQLKPK+VILRVSMHCH CARKVEKHISKLEGVSSYKVDL  K V VIGDILP+EVL+SV
Sbjct: 61  FQLKPKMVILRVSMHCHGCARKVEKHISKLEGVSSYKVDLDTKMVAVIGDILPLEVLQSV 120

Query: 120 SKVKNAQLWNPT 131
           SKVKNAQ WN T
Sbjct: 121 SKVKNAQFWNST 132


>Medtr4g062450.1 | heavy-metal-associated domain protein | HC |
           chr4:23207739-23209696 | 20130731
          Length = 240

 Score = 88.6 bits (218), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 39/66 (59%), Positives = 53/66 (80%)

Query: 63  KPKIVILRVSMHCHACARKVEKHISKLEGVSSYKVDLVNKTVVVIGDILPMEVLESVSKV 122
           K ++V+LRVS+HC AC  KV KHISK+EGV S+ +++  K V +IGD+ P++VL SVSKV
Sbjct: 149 KDQVVVLRVSLHCKACEGKVRKHISKMEGVRSFTIEMETKKVTIIGDVTPLDVLASVSKV 208

Query: 123 KNAQLW 128
           K+AQLW
Sbjct: 209 KSAQLW 214


>Medtr1g067560.1 | copper chaperone | HC | chr1:29144569-29146076 |
           20130731
          Length = 261

 Score = 85.9 bits (211), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 34/64 (53%), Positives = 48/64 (75%)

Query: 65  KIVILRVSMHCHACARKVEKHISKLEGVSSYKVDLVNKTVVVIGDILPMEVLESVSKVKN 124
           ++V+LRVS+HC  C  K+ KHISK++GV+S+ +D   K V ++GD+ P  VL S+SKVKN
Sbjct: 185 QVVVLRVSLHCKGCEGKLRKHISKMQGVTSFNIDFAAKKVTIVGDVTPFSVLASISKVKN 244

Query: 125 AQLW 128
           AQ W
Sbjct: 245 AQFW 248


>Medtr7g100450.1 | copper chaperone | HC | chr7:40453042-40454776 |
           20130731
          Length = 286

 Score = 82.0 bits (201), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 32/64 (50%), Positives = 49/64 (76%)

Query: 65  KIVILRVSMHCHACARKVEKHISKLEGVSSYKVDLVNKTVVVIGDILPMEVLESVSKVKN 124
           ++V+LRVS+HC  C  KV KH+S+++GV+S+ +D   K V V+GD+ P+ V+ S+SKVK 
Sbjct: 209 QVVVLRVSLHCKGCEGKVRKHLSRMQGVTSFNIDFAAKKVTVVGDVTPLSVMASISKVKT 268

Query: 125 AQLW 128
           AQ+W
Sbjct: 269 AQIW 272


>Medtr1g082650.1 | heavy-metal-associated domain protein | HC |
           chr1:36784577-36787395 | 20130731
          Length = 577

 Score = 55.1 bits (131), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/68 (38%), Positives = 45/68 (66%), Gaps = 1/68 (1%)

Query: 62  LKPKIVILRVSMHCHACARKVEKHISKLEGVSSYKVDLVNKTVVVIGDILPMEVLESV-S 120
           +K +  +L+V++HC  C +KV+K + K+EGV S  +D     V+V GD+ P ++L+ + S
Sbjct: 7   MKIQNCLLKVNIHCEGCEQKVKKLLQKIEGVYSVNIDAEQGKVLVTGDVDPAKLLKKLKS 66

Query: 121 KVKNAQLW 128
             K+A+LW
Sbjct: 67  SGKHAELW 74


>Medtr7g013660.1 | copper chaperone | HC | chr7:3949006-3946807 |
           20130731
          Length = 126

 Score = 54.3 bits (129), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 43/73 (58%), Gaps = 6/73 (8%)

Query: 65  KIVILRVSMHCHACARKVEKHISKLEGVSSYKVDLVNKTVVVIGDILPMEVLESVSKV-K 123
           + V+L+V M C  C+  V + + K+EGV S+ +D+  + V V G++ P +V ++VSK  K
Sbjct: 4   ETVVLKVKMSCSGCSGAVNRVLEKMEGVESFDIDMKEQKVTVKGNVKPQDVFDTVSKTGK 63

Query: 124 NAQLW-----NPT 131
             + W     NPT
Sbjct: 64  KTEFWVEPENNPT 76


>Medtr1g092670.1 | copper chaperone | HC | chr1:41728751-41726269 |
           20130731
          Length = 79

 Score = 52.8 bits (125), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 40/69 (57%), Gaps = 1/69 (1%)

Query: 62  LKPKIVILRVSMHCHACARKVEKHISKLEGVSSYKVDLVNKTVVVIGDILPMEVLESVSK 121
           +  + V L+V M C  C   V++ + KL+GV SY +DL  + VVV G++ P  VL++VSK
Sbjct: 1   MSSQTVTLKVGMSCEGCVGAVKRVLGKLDGVESYDIDLKEQKVVVKGNVEPDTVLKTVSK 60

Query: 122 V-KNAQLWN 129
             K    W 
Sbjct: 61  TGKPTAFWE 69


>Medtr2g026685.2 | heavy metal transport/detoxification superfamily
           protein | HC | chr2:9695223-9700095 | 20130731
          Length = 269

 Score = 49.7 bits (117), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 38/60 (63%)

Query: 67  VILRVSMHCHACARKVEKHISKLEGVSSYKVDLVNKTVVVIGDILPMEVLESVSKVKNAQ 126
           ++L++ MHC ACA+ ++K I K++GV S + DL N   +V G I P ++++ V K    Q
Sbjct: 133 IVLKIRMHCDACAQVIQKRIRKIKGVESVETDLGNDQAIVKGVIDPTKLVDEVFKRTKKQ 192



 Score = 46.2 bits (108), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 28/71 (39%), Positives = 39/71 (54%), Gaps = 3/71 (4%)

Query: 63  KPKIVILRVSMHCHACARKVEKHISKLEGVSSYKVDLVNKTVVVIGDIL-PMEVLESVSK 121
           +P  ++L+V MHC ACARKV K +   EGV     D     VVV G    P++VL+ + K
Sbjct: 31  QPPEIVLKVDMHCEACARKVAKALKGFEGVEEVTADSKGSKVVVKGKAADPIKVLKRLQK 90

Query: 122 V--KNAQLWNP 130
              K  +L +P
Sbjct: 91  KSGKKVELISP 101


>Medtr2g026685.1 | heavy metal transport/detoxification superfamily
           protein | HC | chr2:9695223-9700095 | 20130731
          Length = 270

 Score = 49.7 bits (117), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 38/60 (63%)

Query: 67  VILRVSMHCHACARKVEKHISKLEGVSSYKVDLVNKTVVVIGDILPMEVLESVSKVKNAQ 126
           ++L++ MHC ACA+ ++K I K++GV S + DL N   +V G I P ++++ V K    Q
Sbjct: 134 IVLKIRMHCDACAQVIQKRIRKIKGVESVETDLGNDQAIVKGVIDPTKLVDEVFKRTKKQ 193



 Score = 46.2 bits (108), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 28/71 (39%), Positives = 39/71 (54%), Gaps = 3/71 (4%)

Query: 63  KPKIVILRVSMHCHACARKVEKHISKLEGVSSYKVDLVNKTVVVIGDIL-PMEVLESVSK 121
           +P  ++L+V MHC ACARKV K +   EGV     D     VVV G    P++VL+ + K
Sbjct: 32  QPPEIVLKVDMHCEACARKVAKALKGFEGVEEVTADSKGSKVVVKGKAADPIKVLKRLQK 91

Query: 122 V--KNAQLWNP 130
              K  +L +P
Sbjct: 92  KSGKKVELISP 102


>Medtr2g026685.3 | heavy metal transport/detoxification superfamily
           protein | HC | chr2:9695333-9699978 | 20130731
          Length = 229

 Score = 49.7 bits (117), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 38/60 (63%)

Query: 67  VILRVSMHCHACARKVEKHISKLEGVSSYKVDLVNKTVVVIGDILPMEVLESVSKVKNAQ 126
           ++L++ MHC ACA+ ++K I K++GV S + DL N   +V G I P ++++ V K    Q
Sbjct: 93  IVLKIRMHCDACAQVIQKRIRKIKGVESVETDLGNDQAIVKGVIDPTKLVDEVFKRTKKQ 152


>Medtr4g094278.1 | targeted copper chaperone protein | HC |
           chr4:37593961-37593697 | 20130731
          Length = 51

 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 21/43 (48%), Positives = 32/43 (74%)

Query: 91  GVSSYKVDLVNKTVVVIGDILPMEVLESVSKVKNAQLWNPTSC 133
           GV+S+ +D+ +K V V+G + P+EVLES+SKVK A+ W+  S 
Sbjct: 6   GVTSFSIDVESKRVTVMGHVSPVEVLESISKVKKAEFWSTASA 48


>Medtr4g117140.1 | heavy metal-associated domain protein | LC |
           chr4:48540301-48537622 | 20130731
          Length = 527

 Score = 49.3 bits (116), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/69 (34%), Positives = 45/69 (65%), Gaps = 1/69 (1%)

Query: 62  LKPKIVILRVSMHCHACARKVEKHISKLEGVSSYKVDLVNKTVVVIGDILPMEVLESVSK 121
           LK +  +L+V++HC  C  KV+K + K++GV + ++D     V V G++ P  +++ ++K
Sbjct: 7   LKIQKSVLKVNIHCDGCKHKVKKILQKIDGVFTTEIDAEQGKVTVSGNVDPNVLIKKLAK 66

Query: 122 V-KNAQLWN 129
             K+AQLW+
Sbjct: 67  SGKHAQLWS 75


>Medtr4g117220.1 | heavy metal-associated domain protein | HC |
           chr4:48574411-48571845 | 20130731
          Length = 512

 Score = 48.9 bits (115), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/69 (34%), Positives = 45/69 (65%), Gaps = 1/69 (1%)

Query: 62  LKPKIVILRVSMHCHACARKVEKHISKLEGVSSYKVDLVNKTVVVIGDILPMEVLESVSK 121
           LK +  +L+V++HC  C  KV+K + K++GV + ++D     V V G++ P  +++ ++K
Sbjct: 7   LKIQKSVLKVNIHCDGCKHKVKKILQKIDGVFTTEIDAEQGKVTVSGNVDPNVLIKKLAK 66

Query: 122 V-KNAQLWN 129
             K+AQLW+
Sbjct: 67  SGKHAQLWS 75


>Medtr2g022250.1 | heavy metal transport/detoxification domain
           protein | LC | chr2:7655793-7658635 | 20130731
          Length = 494

 Score = 48.1 bits (113), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/68 (33%), Positives = 45/68 (66%), Gaps = 1/68 (1%)

Query: 62  LKPKIVILRVSMHCHACARKVEKHISKLEGVSSYKVDLVNKTVVVIGDILPMEVLESVSK 121
           LK +  +L+V++HC  C +KV+K + K++GV + ++D     V V G++ P  +++ ++K
Sbjct: 7   LKIQKSVLKVNIHCDGCKQKVKKILQKIDGVFATEIDAEQGKVTVSGNVDPNVLIKKLAK 66

Query: 122 V-KNAQLW 128
             K+A+LW
Sbjct: 67  SGKHAELW 74


>Medtr6g026890.1 | heavy metal transport/detoxification superfamily
           protein | HC | chr6:9080776-9082835 | 20130731
          Length = 148

 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 1/64 (1%)

Query: 66  IVILRVSMHCHACARKVEKHISKLEGVSSYKVDLVNKTVVVIGDILPMEVLESVSKV-KN 124
           IV L+V M C  C  ++ + ISKL GV S ++D+ N+ V V G +   +VL  V K  + 
Sbjct: 17  IVELKVHMDCQGCEERIRRVISKLNGVDSLEIDMENQKVTVTGYVDKSKVLRMVRKTGRK 76

Query: 125 AQLW 128
           A+ W
Sbjct: 77  AEYW 80


>Medtr8g096700.1 | heavy metal-associated domain protein | HC |
           chr8:40578699-40576759 | 20130731
          Length = 321

 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 39/61 (63%)

Query: 66  IVILRVSMHCHACARKVEKHISKLEGVSSYKVDLVNKTVVVIGDILPMEVLESVSKVKNA 125
           IVIL+V MHC AC++++++ I K++GV S + DL N  V V G +   +++E V K    
Sbjct: 152 IVILKVHMHCEACSQEIKRRIEKIKGVESAEPDLKNSLVTVKGVLETDKLVEYVYKRTGK 211

Query: 126 Q 126
           Q
Sbjct: 212 Q 212


>Medtr1g083310.1 | heavy-metal-associated domain protein | HC |
           chr1:37074275-37076231 | 20130731
          Length = 402

 Score = 46.6 bits (109), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 7/76 (9%)

Query: 61  QLKPKIVILRVSMHCHACARKVEKHISKLEGVSSYKVDLVNKTVVVIG----DILPMEVL 116
            L  K  +L+VS+HC  C RKV K +  ++GV    +DL  + V+V G    DIL  ++ 
Sbjct: 11  HLNYKTTVLKVSIHCVGCKRKVHKILQAIQGVQDINIDLRQQKVIVTGNVNSDILIHKLA 70

Query: 117 ESVSKVKNAQLW-NPT 131
                 K+ +LW  PT
Sbjct: 71  SKTG--KHVELWPEPT 84


>Medtr5g055020.1 | heavy metal transport/detoxification superfamily
           protein | HC | chr5:22667429-22665201 | 20130731
          Length = 147

 Score = 46.2 bits (108), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 1/66 (1%)

Query: 65  KIVILRVSMHCHACARKVEKHISKLEGVSSYKVDLVNKTVVVIGDILPMEVLESV-SKVK 123
           K V +RV M C  C +KV+  +   +GV SY V    + V V G I   E+L+ V S  K
Sbjct: 25  KTVHIRVKMDCEGCEKKVKNAVKDFDGVESYNVTKNQQRVTVTGHIDANEILDEVRSTGK 84

Query: 124 NAQLWN 129
            A +W+
Sbjct: 85  TADMWS 90


>Medtr2g022240.1 | heavy metal transport/detoxification domain
           protein | LC | chr2:7650750-7652903 | 20130731
          Length = 478

 Score = 46.2 bits (108), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 25/68 (36%), Positives = 47/68 (69%), Gaps = 1/68 (1%)

Query: 62  LKPKIVILRVSMHCHACARKVEKHISKLEGVSSYKVDLVNKTVVVIGDILPMEVLESVSK 121
           LK +  +L+V+MHC  C +KV+K + K++GV + ++D+    V+V G+I P  +++ ++K
Sbjct: 7   LKIQKCVLKVNMHCDGCKKKVKKTLQKIDGVYTIEIDIEQGKVIVAGNIDPDVLIKKLAK 66

Query: 122 V-KNAQLW 128
             K+A+LW
Sbjct: 67  SKKHAELW 74