Miyakogusa Predicted Gene

Lj4g3v3092820.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v3092820.1 Non Characterized Hit- tr|K3XFU6|K3XFU6_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si000765,32.31,6e-19,Frigida,Frigida-like; FAMILY NOT
NAMED,NULL,95866_g.1
         (291 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g083500.1 | frigida-LIKE protein | HC | chr8:43605849-4361...   352   2e-97
Medtr1g103710.1 | frigida-LIKE protein | HC | chr1:46944448-4694...   122   4e-28
Medtr8g010160.1 | ABI3-interacting protein | HC | chr8:2588108-2...    73   2e-13
Medtr8g010170.1 | ABI3-interacting protein | HC | chr8:2595983-2...    64   1e-10
Medtr4g095080.1 | frigida-like protein | HC | chr4:39679199-3968...    63   4e-10

>Medtr8g083500.1 | frigida-LIKE protein | HC |
           chr8:43605849-43610391 | 20130731
          Length = 539

 Score =  352 bits (904), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 182/294 (61%), Positives = 224/294 (76%), Gaps = 17/294 (5%)

Query: 1   MATKLATTPPS---DRVEQFFQELQTHKSIIATCTDLFTTLSTHFSSLQHSLSEKTQSLE 57
           MAT+L  T  S   ++V QFF EL++ K+ +  CTDLFT L+ HFS LQ S+S+K Q+L+
Sbjct: 1   MATQLVATTISSETNKVHQFFNELESQKNTLIKCTDLFTKLNNHFSFLQDSISQKFQTLD 60

Query: 58  SKFQTLDSHYNETLESLNTHETSIPERESAAAARIDEQKEAAIAEFRNPLPSDSELPATL 117
           S+FQ+L+S + ETLESL   E SIPERES+AAARIDEQKEAA+A  RNP P  S + A L
Sbjct: 61  SQFQSLESRHKETLESLANQENSIPERESSAAARIDEQKEAALAALRNPNPP-SNIAAAL 119

Query: 118 KSLSRKMDSSALLRFIVSKRKESSWLRAEIAPAIAEAVGAEMPPAIAGAVAPPKLVLDAV 177
           KSLSRKMD+ +LL F++SKRKES  LR EIA A+ EAV A            P+LVLDAV
Sbjct: 120 KSLSRKMDAESLLMFVISKRKESIMLRPEIAAALKEAVDA------------PRLVLDAV 167

Query: 178 EEFLNSKMMGSKSGLTDKRWACGLLVQALSSDSPGFSRRVVERAVGLLDSWKEQMDSDTE 237
           EE+L  K  G KSG+TDKRWACGLL+Q L S+S  +SR +VERA  LLD WKEQ+D + E
Sbjct: 168 EEYLTCKTEG-KSGVTDKRWACGLLIQGLISESSVYSRTIVERAGSLLDLWKEQLDGEPE 226

Query: 238 KGAAEVVMFMQMVVCFGLRSRFDEEYLRKLVMEFGTRRDMAKLAASLDFGDEMI 291
           KGAAE+VMF+QMVVCFGLRS+ D+EYLRK VM+F +RRDMAK+AASL+FGD+MI
Sbjct: 227 KGAAEMVMFLQMVVCFGLRSKVDDEYLRKSVMKFASRRDMAKVAASLEFGDKMI 280


>Medtr1g103710.1 | frigida-LIKE protein | HC |
           chr1:46944448-46941301 | 20130731
          Length = 519

 Score =  122 bits (306), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 96/297 (32%), Positives = 140/297 (47%), Gaps = 40/297 (13%)

Query: 18  FQELQTHKSIIATCTDLFTTLSTHFSSLQHSLSEKTQSLESKFQTLDSHYNETLESLNTH 77
           F + Q   S++ +CT L+  LS HFSSL+  L  K+++L  K ++LD+  NE+L  L   
Sbjct: 18  FDDFQRQTSLMTSCTLLWKELSDHFSSLEQDLLNKSEALNRKIRSLDNQTNESLNLLRHR 77

Query: 78  ETSIPERESAAAARIDEQKEAAIAEFR----------NPLPSDSELPATLKSLSRKMDSS 127
           E+++ +    A   ID + EAA+A               + +   L   LKS   KMD+ 
Sbjct: 78  ESTLDDALQIALRDIDNRTEAALAALSRVREDVEDGDGEVDNGEGLMLKLKSFCLKMDAL 137

Query: 128 ALLRFIVSKRKESSWLRAEIAPAIAEAVGAEMPPAIAGAVAPPKLVLDAVEEFLNSKMMG 187
               F++ K+KE   LR            AEMP A+   + P K VL+A+ E       G
Sbjct: 138 GFWGFVIGKKKELEGLR------------AEMPEALGECIDPAKFVLEAISEVFPVDKRG 185

Query: 188 SKSGLTDKRWACGLLVQALSS---DSPGFSRRVVERAVGLL-----DSWKEQMDSDTEKG 239
            KSG  D  WAC L++++L     D    SR +V   V  L     + WK  ++   E+G
Sbjct: 186 DKSG-NDLGWACVLVLESLVPVMVDPVLKSRMLVTPTVKKLAKDVAEKWKVSLE---ERG 241

Query: 240 AAEVV------MFMQMVVCFGLRSRFDEEYLRKLVMEFGTRRDMAKLAASLDFGDEM 290
             E V       F+Q +V FG+    D    RKLV+    R+ M KLA SL   D+M
Sbjct: 242 GVENVKTPDVHTFLQHLVTFGIVDSNDLGLYRKLVIASAWRKHMPKLALSLGLTDQM 298


>Medtr8g010160.1 | ABI3-interacting protein | HC |
           chr8:2588108-2583935 | 20130731
          Length = 547

 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 81/343 (23%), Positives = 143/343 (41%), Gaps = 79/343 (23%)

Query: 13  RVEQFFQELQTHKSIIATCTDLFTTLSTHFSSLQHSLSEKTQSLESKFQTLDSHYNETLE 72
           ++++ F EL++++++  T    +  L  HF  L+ SL  +   LE   +  ++   +  E
Sbjct: 20  QLQKAFAELESYRAV--TLNMKWKELEEHFHGLEKSLKRRFHELEDHEKVFENKTMKARE 77

Query: 73  SLNTHETSIPERESAAAARIDEQKEAAIAEFRN--------------------------- 105
            L   E ++  +E A   R+ E+++AA     N                           
Sbjct: 78  MLKKQEEAVFAKEQATLQRLQEKRDAATFAILNAREKHRKVSQKDLAIVSNGGHGTSDVE 137

Query: 106 --PL-----------------PSDSELPAT----LKSLSRKMDSSALLRFIVSKRKESSW 142
             P+                 P +  L +     L  L ++MD S L +FI   RK  + 
Sbjct: 138 EKPMDAISNVTEGLVEDVKLSPGNGNLESISYPELVKLCKEMDVSGLHKFISDNRKNLAA 197

Query: 143 LRAEIAPAIAEAVGAEMPPAIAGAVAPPKLVLDAVEEF----LNSKMMGSKSGLTDKRWA 198
           +R EI            P A+  +     LVLD++E F    ++S+ +   + L   R  
Sbjct: 198 IREEI------------PHALKASPDAACLVLDSLEGFYCMEVSSQDIKKDANLLGLRRT 245

Query: 199 CGLLVQALS---SDSPGFS----RRVVERAVGLLDSWKEQMDS---DTEKGAA-EVVMFM 247
           C +L++ LS   +DS G S    + + +RA  + + WK ++D+   D   G + E   F+
Sbjct: 246 CIMLMECLSDFLTDSGGISNLVSKDIKDRAKEVAEEWKPKLDALDMDASNGNSLEAHAFL 305

Query: 248 QMVVCFGLRSRFDEEYLRKLVMEFGTRRDMAKLAASLDFGDEM 290
           Q++  F + S FDEE L +L+     RR  A L   L   ++M
Sbjct: 306 QLLASFNIASGFDEEELSRLIPMVSRRRQTADLCRCLGLSEKM 348


>Medtr8g010170.1 | ABI3-interacting protein | HC |
           chr8:2595983-2590280 | 20130731
          Length = 545

 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 78/343 (22%), Positives = 140/343 (40%), Gaps = 79/343 (23%)

Query: 13  RVEQFFQELQTHKSIIATCTDLFTTLSTHFSSLQHSLSEKTQSLESKFQTLDSHYNETLE 72
           ++++ F EL++++++  T    +  L  HF  L+ SL  +   LE + +  ++   +  E
Sbjct: 20  QLQKAFAELESYRAV--TLNLKWKELEEHFQGLEKSLKRRFNELEDQEKEFENKTRKARE 77

Query: 73  SLNTHETSIPERESAAAARIDEQKEAA---IAEFRNPL------------------PSDS 111
            L   E ++  +E A   R+  +++A+   I + R                     P   
Sbjct: 78  MLEKQEAAVFAKEQALLQRLQRKRDASVFTIVDARKKYRKVSSKDLGTVFNGSQAAPDVK 137

Query: 112 ELPAT-----------------------------LKSLSRKMDSSALLRFIVSKRKESSW 142
           E P                               L  L ++MD++ L +FI   RK  + 
Sbjct: 138 EKPVDAVSTGAECNIENGKLSPANVSVDMMSYPELVKLCKEMDAAGLHKFISDNRKNLAA 197

Query: 143 LRAEIAPAIAEAVGAEMPPAIAGAVAPPKLVLDAVEEF----LNSKMMGSKSGLTDKRWA 198
           +R EI            P A+  A     LVLD++E F    ++S+ +   + L   R  
Sbjct: 198 VREEI------------PLALRAAPNAGCLVLDSLEGFYCTEVSSQDIKKDANLLGLRRT 245

Query: 199 CGLLVQALS-------SDSPGFSRRVVERAVGLLDSWKEQMDS---DTEKGAA-EVVMFM 247
             +L++ LS       S S   S+ + +RA  + + WK ++D    D   G + E   F+
Sbjct: 246 SIMLLECLSDFLTNLGSVSNVISKDIKDRAKAVAEEWKPRLDDLDMDASNGNSLEAHAFL 305

Query: 248 QMVVCFGLRSRFDEEYLRKLVMEFGTRRDMAKLAASLDFGDEM 290
           Q++  FG+ S F+EE L +L+     RR  A L   L   ++M
Sbjct: 306 QLLASFGIASDFNEEELSRLIPMVSRRRQTADLCRCLGLSEKM 348


>Medtr4g095080.1 | frigida-like protein | HC |
           chr4:39679199-39682625 | 20130731
          Length = 545

 Score = 62.8 bits (151), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 72/303 (23%), Positives = 125/303 (41%), Gaps = 68/303 (22%)

Query: 38  LSTHFSSLQHSLSEKTQSLESKFQTLDSHYNETLESLNTHETSIPERESAAAARIDEQKE 97
           +  HFS L+ +L++K + L++K +  +    E    L   + ++  +E     R+ E K+
Sbjct: 42  IKQHFSDLEMALNKKNEELQAKEREYEEKQLEMNTLLTQRKAAVTSKEQDLLDRLQELKD 101

Query: 98  AAIAEFRNPLPSD--------------------------------SELPAT-------LK 118
            A+A      P+D                                SE  AT       LK
Sbjct: 102 TAVAAIIEARPNDETTTFDFVYDGEDKDNQVSISPEDSPNKSGEKSEGVATEVRPHLDLK 161

Query: 119 SLSRKMDSSALLRFIVSKRKESSWLRAEIAPAIAEAVGAEMPPAIAGAVAPPKLVLDAVE 178
               KMD++ LL ++V+ +K+ S  R E++ A+  A              P +LVLD + 
Sbjct: 162 VYCEKMDATGLLDYVVAHKKKVSEFREEVSVALESATD------------PARLVLDLLL 209

Query: 179 EFLNSKMMGSKS-----GLTDKRWACGLLVQALSS----DSPG----FSRRVVERAVGLL 225
            F        ++      L  KR +C L+++A++S      PG     +    ++A  + 
Sbjct: 210 GFYPDNETSQQNDNVGAALQGKRKSCILILEAMASLLARADPGADHLLNPETKQQAKAIA 269

Query: 226 DSWKEQMDS---DTEKGAA-EVVMFMQMVVCFGLRSRFDEEYLRKLVMEFGTRRDMAKLA 281
           D W+ ++ S   D   G + E   F+Q++  + + S FDEE L KLV      R   +L 
Sbjct: 270 DEWRLKLASAGIDAANGNSLEAEAFLQLLSTYRIASEFDEEELCKLVPAVAQNRSAPELC 329

Query: 282 ASL 284
            S+
Sbjct: 330 RSI 332