Miyakogusa Predicted Gene

Lj4g3v3081750.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v3081750.1 Non Characterized Hit- tr|G7LH59|G7LH59_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,64.81,0.000000000006,seg,NULL,
NODE_102093_length_670_cov_9.352239.path2.1
         (66 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g083460.1 | hypothetical protein | HC | chr8:43590678-4358...    61   2e-10
Medtr6g086445.1 | hypothetical protein | HC | chr6:32510553-3251...    57   5e-09

>Medtr8g083460.1 | hypothetical protein | HC |
          chr8:43590678-43589528 | 20130731
          Length = 83

 Score = 61.2 bits (147), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 25/28 (89%), Positives = 28/28 (100%)

Query: 27 MKRCVCSPSQHPGSFRCRQHQAKYVWRN 54
          +K+CVCSPS+HPGSFRCRQHQAKYVWRN
Sbjct: 52 IKQCVCSPSKHPGSFRCRQHQAKYVWRN 79


>Medtr6g086445.1 | hypothetical protein | HC |
          chr6:32510553-32511235 | 20130731
          Length = 84

 Score = 56.6 bits (135), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 23/28 (82%), Positives = 25/28 (89%)

Query: 27 MKRCVCSPSQHPGSFRCRQHQAKYVWRN 54
          +KRCVCSPSQHPGSFRCRQH  +YVWR 
Sbjct: 53 VKRCVCSPSQHPGSFRCRQHHGEYVWRG 80