Miyakogusa Predicted Gene
- Lj4g3v3081730.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v3081730.1 tr|G7L8X6|G7L8X6_MEDTR Ras-related protein Rab-5C
OS=Medicago truncatula GN=MTR_8g103550 PE=3 SV=1,71.82,0,Rab subfamily
of small GTPases,Small GTPase superfamily, Rab type; Ras subfamily of
RAS small GTPase,gene.g57989.t1.1
(139 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr8g103550.1 | RAB GTPase-like protein A5B | HC | chr8:435755... 254 1e-68
Medtr2g102060.1 | small GTPase family RAB protein | HC | chr2:43... 199 8e-52
Medtr3g064390.1 | small GTPase family RAB protein | HC | chr3:28... 184 2e-47
Medtr5g076590.1 | small GTPase family RAB protein | HC | chr5:32... 182 7e-47
Medtr3g064390.2 | small GTPase family RAB protein | HC | chr3:28... 143 4e-35
Medtr1g094220.1 | small GTPase family RAB protein | HC | chr1:42... 137 4e-33
Medtr1g094220.5 | small GTPase family RAB protein | HC | chr1:42... 127 3e-30
Medtr1g094220.2 | small GTPase family RAB protein | HC | chr1:42... 127 3e-30
Medtr1g094220.3 | small GTPase family RAB protein | HC | chr1:42... 125 9e-30
Medtr1g094220.4 | small GTPase family RAB protein | HC | chr1:42... 124 2e-29
Medtr8g031870.1 | RAB GTPase-like protein A1D | HC | chr8:119315... 97 5e-21
Medtr8g031680.1 | RAB GTPase-like protein C2B | LC | chr8:119074... 96 9e-21
Medtr6g021790.1 | small GTPase family RAB protein | HC | chr6:75... 96 1e-20
Medtr2g027660.1 | RAB GTPase-like protein C2B | HC | chr2:101320... 94 3e-20
Medtr2g075950.1 | RAB GTPase-like protein A1D | HC | chr2:317892... 92 1e-19
Medtr1g068730.1 | RAB GTPase-like protein A5B | HC | chr1:293444... 91 3e-19
Medtr8g031830.1 | small GTPase family RAB protein | HC | chr8:11... 91 3e-19
Medtr1g068740.1 | RAB GTPase-like protein A5B | HC | chr1:293521... 90 6e-19
Medtr1g115325.1 | RAB GTPase-like protein A5B | HC | chr1:520310... 90 6e-19
Medtr7g100020.2 | RAB GTPase-like protein A5B | HC | chr7:401949... 90 8e-19
Medtr7g100020.1 | RAB GTPase-like protein A5B | HC | chr7:401949... 90 8e-19
Medtr8g031660.1 | RAB GTPase-like protein A5B | LC | chr8:119027... 89 1e-18
Medtr2g005510.1 | RAB GTPase-like protein A1D | HC | chr2:188783... 86 9e-18
Medtr4g064897.1 | RAB GTPase-like protein A1D | HC | chr4:242499... 86 1e-17
Medtr4g063160.2 | RAB GTPase-like protein A5B | HC | chr4:233869... 85 2e-17
Medtr4g063160.1 | RAB GTPase-like protein A5B | HC | chr4:233872... 85 2e-17
Medtr2g083860.1 | RAB GTPase-like protein A1D | HC | chr2:351953... 85 2e-17
Medtr5g013900.1 | RAB GTPase-like protein B1C | HC | chr5:458101... 84 3e-17
Medtr4g088090.1 | RAB GTPase-like protein A1D | HC | chr4:346993... 84 5e-17
Medtr2g014990.1 | RAB GTPase-like protein A1D | HC | chr2:437551... 83 6e-17
Medtr8g089985.1 | RAB GTPase-like protein A1D | HC | chr8:376274... 83 6e-17
Medtr2g096550.1 | RAB GTPase-like protein A1D | HC | chr2:412383... 83 7e-17
Medtr4g079350.1 | RAB GTPase-like protein C2B | HC | chr4:306486... 83 7e-17
Medtr3g087160.1 | RAB GTPase-like protein B1C | HC | chr3:395302... 83 1e-16
Medtr0262s0050.1 | RAB GTPase-like protein A1D | HC | scaffold02... 82 1e-16
Medtr1g062760.1 | RAB GTPase-like protein A5B | HC | chr1:274958... 82 2e-16
Medtr8g090215.1 | RAB GTPase-like protein B1C | HC | chr8:378544... 82 2e-16
Medtr8g006970.1 | RAB GTPase-like protein A5D | HC | chr8:114796... 82 2e-16
Medtr8g036220.1 | RAB GTPase-like protein A1D | HC | chr8:133937... 82 2e-16
Medtr3g069510.1 | RAB GTPase-like protein A1D | HC | chr3:310902... 81 4e-16
Medtr3g086980.1 | RAB GTPase-like protein A1D | HC | chr3:394347... 81 4e-16
Medtr1g052475.1 | RAB GTPase-like protein A1D | HC | chr1:213364... 81 4e-16
Medtr2g005500.1 | RAB GTPase-like protein B1C | HC | chr2:184631... 80 4e-16
Medtr7g081700.1 | RAB GTPase-like protein B1C | HC | chr7:312287... 80 5e-16
Medtr7g103070.1 | RAB GTPase-like protein C2B | HC | chr7:414408... 80 6e-16
Medtr8g027220.1 | Ras-related small GTP-binding family protein |... 80 8e-16
Medtr4g098950.1 | RAB GTPase-like protein B1C | HC | chr4:408810... 79 1e-15
Medtr8g092020.1 | RAB GTPase-like protein A1D | HC | chr8:384078... 79 1e-15
Medtr7g051940.1 | RAB GTPase-like protein A1D | HC | chr7:182342... 79 2e-15
Medtr7g405790.1 | RAB GTPase-like protein A1D | HC | chr7:264041... 78 3e-15
Medtr7g117910.1 | small GTPase family RAB protein | HC | chr7:48... 78 3e-15
Medtr1g078200.1 | RAB GTPase-like protein C2B | HC | chr1:349987... 77 4e-15
Medtr1g097420.1 | RAB GTPase-like protein A1D | HC | chr1:439465... 77 5e-15
Medtr4g099470.1 | RAB GTPase-like protein A2D | HC | chr4:412983... 77 6e-15
Medtr4g069850.1 | RAB GTPase-like protein A1D | HC | chr4:262765... 77 6e-15
Medtr6g079550.1 | RAB GTPase-like protein A1D | HC | chr6:300135... 77 6e-15
Medtr2g090865.1 | RAB GTPase-like protein A1D | HC | chr2:390019... 76 9e-15
Medtr8g093740.1 | RAB GTPase-like protein A5B | HC | chr8:392232... 76 1e-14
Medtr8g093740.2 | RAB GTPase-like protein A5B | HC | chr8:392232... 76 1e-14
Medtr8g006970.2 | RAB GTPase-like protein A5D | HC | chr8:114871... 76 1e-14
Medtr8g107070.1 | RAB GTPase-like protein A2D | HC | chr8:452338... 75 1e-14
Medtr1g097420.2 | RAB GTPase-like protein A1D | HC | chr1:439465... 75 2e-14
Medtr1g090717.1 | RAB GTPase-like protein A5B | HC | chr1:407164... 74 4e-14
Medtr1g068740.2 | RAB GTPase-like protein A5B | HC | chr1:293521... 74 6e-14
Medtr4g012940.1 | RAB GTPase-like protein A1D | HC | chr4:346608... 74 6e-14
Medtr2g101890.1 | RAB GTPase-like protein A1D | HC | chr2:438414... 73 7e-14
Medtr1g068730.2 | RAB GTPase-like protein A5B | HC | chr1:293444... 73 9e-14
Medtr1g029450.1 | small GTPase family RAB protein | HC | chr1:10... 73 1e-13
Medtr3g096350.1 | small GTPase family RAB protein | HC | chr3:44... 72 2e-13
Medtr3g096350.3 | small GTPase family RAB protein | HC | chr3:44... 68 3e-12
Medtr3g096350.2 | small GTPase family RAB protein | HC | chr3:44... 67 4e-12
Medtr1452s0010.1 | RAB GTPase-like protein G3A | HC | scaffold14... 65 2e-11
Medtr7g103070.2 | RAB GTPase-like protein C2B | HC | chr7:414402... 63 9e-11
Medtr6g039490.1 | small GTPase family RAB protein | HC | chr6:14... 63 1e-10
Medtr8g093740.5 | RAB GTPase-like protein A5B | HC | chr8:392232... 61 3e-10
Medtr8g093740.4 | RAB GTPase-like protein A5B | HC | chr8:392234... 61 3e-10
Medtr8g093740.3 | RAB GTPase-like protein A5B | HC | chr8:392232... 61 3e-10
Medtr1686s0010.1 | Ras family small GTPase | HC | scaffold1686:8... 60 8e-10
Medtr3g107717.1 | GTP-binding nuclear Ran-like protein | HC | ch... 59 1e-09
Medtr3g107713.1 | GTP-binding nuclear Ran-like protein | HC | ch... 59 1e-09
Medtr3g107707.1 | GTP-binding nuclear Ran-like protein | HC | ch... 59 1e-09
Medtr2g005500.2 | RAB GTPase-like protein B1C | HC | chr2:184631... 52 2e-07
Medtr8g075240.1 | Rho-like GTP-binding protein | HC | chr8:31801... 51 3e-07
Medtr5g022600.3 | Rho-like GTP-binding protein | HC | chr5:89135... 49 1e-06
Medtr5g022600.2 | Rho-like GTP-binding protein | HC | chr5:89135... 49 1e-06
Medtr5g022600.1 | Rho-like GTP-binding protein | HC | chr5:89135... 49 1e-06
Medtr4g113620.1 | GTP-binding nuclear protein Ran1 | HC | chr4:4... 48 2e-06
Medtr4g073250.1 | Rho-like GTP-binding protein | HC | chr4:27704... 48 2e-06
Medtr4g088055.1 | Rho-like GTP-binding protein | HC | chr4:34676... 47 4e-06
Medtr2g090875.1 | Rho-like GTP-binding protein | HC | chr2:39006... 47 5e-06
>Medtr8g103550.1 | RAB GTPase-like protein A5B | HC |
chr8:43575571-43573270 | 20130731
Length = 198
Score = 254 bits (650), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 131/181 (72%), Positives = 135/181 (74%), Gaps = 42/181 (23%)
Query: 1 MGTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPM 60
MGTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYH LAPM
Sbjct: 18 MGTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHSLAPM 77
Query: 61 YYRGAASAIVVYDITSMD-----------------------------------------G 79
YYRG+A+AIVVYDITSMD G
Sbjct: 78 YYRGSAAAIVVYDITSMDSFVRAKKWVREVQRQANPNLIMLLVANKADLEDQRKVGNEEG 137
Query: 80 EEYAKENGMTFFETSAKTAQNVNELFYEIAKRLAKANPSRQTGIKLQSRPQE-RRRMFCC 138
EEYAKENGM+FFETSAKTAQNVNELFYEIAKRLAKANPSRQTGIKL R QE RRR+FCC
Sbjct: 138 EEYAKENGMSFFETSAKTAQNVNELFYEIAKRLAKANPSRQTGIKLHGRTQETRRRLFCC 197
Query: 139 A 139
A
Sbjct: 198 A 198
>Medtr2g102060.1 | small GTPase family RAB protein | HC |
chr2:43921046-43919465 | 20130731
Length = 200
Score = 199 bits (505), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 103/181 (56%), Positives = 122/181 (67%), Gaps = 42/181 (23%)
Query: 1 MGTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPM 60
MGTGKTSL LRFVKGQF + QE TIGAAFFTQ+LSL+EATVKFDIWDTAGQERYH LAPM
Sbjct: 19 MGTGKTSLALRFVKGQFFQNQEPTIGAAFFTQILSLSEATVKFDIWDTAGQERYHSLAPM 78
Query: 61 YYRGAASAIVVYDITSM-----------------------------------------DG 79
YYRGAA+AIVVYDI+S+ DG
Sbjct: 79 YYRGAAAAIVVYDISSIDTFVRAKKWVQELQRHGSQKLVMALVANKCDLEPKREVETEDG 138
Query: 80 EEYAKENGMTFFETSAKTAQNVNELFYEIAKRLAKANPSRQTGIKLQSR-PQERRRMFCC 138
E++A+ENGM + ETSAKTA+N+NELFYEI +RLA+A PS+ GI L++ P R+ FCC
Sbjct: 139 EQFAQENGMFYMETSAKTAENINELFYEIGRRLARAFPSKPPGITLRNEIPGGGRKFFCC 198
Query: 139 A 139
+
Sbjct: 199 S 199
>Medtr3g064390.1 | small GTPase family RAB protein | HC |
chr3:28986937-28992404 | 20130731
Length = 200
Score = 184 bits (468), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 98/180 (54%), Positives = 116/180 (64%), Gaps = 42/180 (23%)
Query: 1 MGTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPM 60
MG GK+SLVLRFVKGQF E+QESTIGAAFF+Q L++N+ATVKF+IWDTAGQERYH LAPM
Sbjct: 19 MGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPM 78
Query: 61 YYRGAASAIVVYDITSMD--------------------------------------GEE- 81
YYRGAA+AI+VYDITS D EE
Sbjct: 79 YYRGAAAAIIVYDITSSDSFSRAKKWVQELQKQGNPNMVMALAGNKSDLEDKRKVTAEEA 138
Query: 82 --YAKENGMTFFETSAKTAQNVNELFYEIAKRLAKANPSRQ-TGIKLQSRPQERRRMFCC 138
YA+ENG+ F ETSAK+A NVN++FYEIAKRL +A P++ G+ L RP E R C
Sbjct: 139 RVYAEENGLFFMETSAKSAANVNDVFYEIAKRLPRAQPAQNPAGMVLVDRPAEGSRAASC 198
>Medtr5g076590.1 | small GTPase family RAB protein | HC |
chr5:32675525-32681053 | 20130731
Length = 200
Score = 182 bits (463), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 96/180 (53%), Positives = 117/180 (65%), Gaps = 42/180 (23%)
Query: 1 MGTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPM 60
MG GK+SLVLRFVKGQF E+QESTIGAAFF+Q L++N+ATVKF+IWDTAGQERYH LAPM
Sbjct: 19 MGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPM 78
Query: 61 YYRGAASAIVVYDITSMD--------------------------------------GEE- 81
YYRGAA+AI+VYDIT+++ EE
Sbjct: 79 YYRGAAAAIIVYDITNLESFTRAKKWVQELQKQGNPNMVVAFAGNKADLEDKRKVTAEEA 138
Query: 82 --YAKENGMTFFETSAKTAQNVNELFYEIAKRLAKANPSRQ-TGIKLQSRPQERRRMFCC 138
YA+ENG+ F ETSAKTA NVN++FYEIAK+L +A P++ G+ L RP E R C
Sbjct: 139 RVYAEENGLFFIETSAKTAANVNDIFYEIAKKLPRAQPAQNPAGMVLVDRPAEGTRAASC 198
>Medtr3g064390.2 | small GTPase family RAB protein | HC |
chr3:28986937-28992404 | 20130731
Length = 158
Score = 143 bits (361), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 66/85 (77%), Positives = 76/85 (89%)
Query: 1 MGTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPM 60
MG GK+SLVLRFVKGQF E+QESTIGAAFF+Q L++N+ATVKF+IWDTAGQERYH LAPM
Sbjct: 19 MGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPM 78
Query: 61 YYRGAASAIVVYDITSMDGEEYAKE 85
YYRGAA+AI+VYDITS D AK+
Sbjct: 79 YYRGAAAAIIVYDITSSDSFSRAKK 103
>Medtr1g094220.1 | small GTPase family RAB protein | HC |
chr1:42431733-42425453 | 20130731
Length = 199
Score = 137 bits (344), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 72/157 (45%), Positives = 93/157 (59%), Gaps = 42/157 (26%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEAT-VKFDIWDTAGQERYHCLAPM 60
G GK+ +VLRFV+GQF + T+GA+F +Q ++L ++T VKF+IWDTAGQERY LAP+
Sbjct: 41 GVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPL 100
Query: 61 YYRGAASAIVVYDITSM-----------------------------------------DG 79
YYRGAA A++ YDITS DG
Sbjct: 101 YYRGAAVAVIAYDITSPESFSKAQYWVKELQKHGSPDIVMALVGNKADLQEKREVAVEDG 160
Query: 80 EEYAKENGMTFFETSAKTAQNVNELFYEIAKRLAKAN 116
+YA++NGM F ETSAKTA N+NELF EIAKRL + +
Sbjct: 161 MDYAEKNGMFFIETSAKTADNINELFEEIAKRLPRPS 197
>Medtr1g094220.5 | small GTPase family RAB protein | HC |
chr1:42431707-42425453 | 20130731
Length = 204
Score = 127 bits (319), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 67/149 (44%), Positives = 87/149 (58%), Gaps = 42/149 (28%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEAT-VKFDIWDTAGQERYHCLAPM 60
G GK+ +VLRFV+GQF + T+GA+F +Q ++L ++T VKF+IWDTAGQERY LAP+
Sbjct: 41 GVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPL 100
Query: 61 YYRGAASAIVVYDITSM-----------------------------------------DG 79
YYRGAA A++ YDITS DG
Sbjct: 101 YYRGAAVAVIAYDITSPESFSKAQYWVKELQKHGSPDIVMALVGNKADLQEKREVAVEDG 160
Query: 80 EEYAKENGMTFFETSAKTAQNVNELFYEI 108
+YA++NGM F ETSAKTA N+NELF +I
Sbjct: 161 MDYAEKNGMFFIETSAKTADNINELFEDI 189
>Medtr1g094220.2 | small GTPase family RAB protein | HC |
chr1:42431707-42425453 | 20130731
Length = 204
Score = 127 bits (319), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 67/149 (44%), Positives = 87/149 (58%), Gaps = 42/149 (28%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEAT-VKFDIWDTAGQERYHCLAPM 60
G GK+ +VLRFV+GQF + T+GA+F +Q ++L ++T VKF+IWDTAGQERY LAP+
Sbjct: 41 GVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPL 100
Query: 61 YYRGAASAIVVYDITSM-----------------------------------------DG 79
YYRGAA A++ YDITS DG
Sbjct: 101 YYRGAAVAVIAYDITSPESFSKAQYWVKELQKHGSPDIVMALVGNKADLQEKREVAVEDG 160
Query: 80 EEYAKENGMTFFETSAKTAQNVNELFYEI 108
+YA++NGM F ETSAKTA N+NELF +I
Sbjct: 161 MDYAEKNGMFFIETSAKTADNINELFEDI 189
>Medtr1g094220.3 | small GTPase family RAB protein | HC |
chr1:42431707-42425453 | 20130731
Length = 236
Score = 125 bits (315), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 68/153 (44%), Positives = 89/153 (58%), Gaps = 43/153 (28%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEAT-VKFDIWDTAGQERYHCLAPM 60
G GK+ +VLRFV+GQF + T+GA+F +Q ++L ++T VKF+IWDTAGQERY LAP+
Sbjct: 41 GVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPL 100
Query: 61 YYRGAASAIVVYDITSM-----------------------------------------DG 79
YYRGAA A++ YDITS DG
Sbjct: 101 YYRGAAVAVIAYDITSPESFSKAQYWVKELQKHGSPDIVMALVGNKADLQEKREVAVEDG 160
Query: 80 EEYAKENGMTFFETSAKTAQNVNELFYEIAKRL 112
+YA++NGM F ETSAKTA N+NELF E++ L
Sbjct: 161 MDYAEKNGMFFIETSAKTADNINELF-EVSDNL 192
>Medtr1g094220.4 | small GTPase family RAB protein | HC |
chr1:42431707-42425453 | 20130731
Length = 208
Score = 124 bits (312), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 85/146 (58%), Gaps = 42/146 (28%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEAT-VKFDIWDTAGQERYHCLAPM 60
G GK+ +VLRFV+GQF + T+GA+F +Q ++L ++T VKF+IWDTAGQERY LAP+
Sbjct: 41 GVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPL 100
Query: 61 YYRGAASAIVVYDITSM-----------------------------------------DG 79
YYRGAA A++ YDITS DG
Sbjct: 101 YYRGAAVAVIAYDITSPESFSKAQYWVKELQKHGSPDIVMALVGNKADLQEKREVAVEDG 160
Query: 80 EEYAKENGMTFFETSAKTAQNVNELF 105
+YA++NGM F ETSAKTA N+NELF
Sbjct: 161 MDYAEKNGMFFIETSAKTADNINELF 186
>Medtr8g031870.1 | RAB GTPase-like protein A1D | HC |
chr8:11931504-11930682 | 20130731
Length = 189
Score = 97.1 bits (240), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 79/160 (49%), Gaps = 41/160 (25%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GK+ L+L+F +F + + TIG F + +++N +VK IWDTAGQER+ + Y
Sbjct: 16 GVGKSCLLLQFTDNRFQRFHDVTIGVEFGIRTININNNSVKLQIWDTAGQERFRSITRSY 75
Query: 62 YRGAASAIVVYDIT-----------------------------------------SMDGE 80
YR AA A++VYDIT + +GE
Sbjct: 76 YRKAAGALLVYDITRRETFDHMATWLEDARQHASSDMIIMLVGNKSDLAGNRLVSTEEGE 135
Query: 81 EYAKENGMTFFETSAKTAQNVNELFYEIAKRLAKANPSRQ 120
++AKENG+ F E SAK+ +N+ E F + A+R+ R+
Sbjct: 136 KFAKENGLMFMEVSAKSRENIEEAFVKTAERMRVGYEGRR 175
>Medtr8g031680.1 | RAB GTPase-like protein C2B | LC |
chr8:11907473-11906841 | 20130731
Length = 210
Score = 96.3 bits (238), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 77/154 (50%), Gaps = 41/154 (26%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GK+ LVL+F+ +F + +TIG F + +++N VK IWDTAGQER+ + Y
Sbjct: 16 GVGKSCLVLQFMDNRFQRFHNATIGVGFGFKTININNNPVKLQIWDTAGQERFRSITKSY 75
Query: 62 YRGAASAIVVYDIT-----------------------------------------SMDGE 80
YR AA A++VYDIT + +GE
Sbjct: 76 YRKAACALLVYDITKRETFNHLATWLEDARQHASSDMIIMLIGNKSDLACNRVVSTKEGE 135
Query: 81 EYAKENGMTFFETSAKTAQNVNELFYEIAKRLAK 114
++AKENG+ F E SAK+ +N+ E F + A+ + K
Sbjct: 136 KFAKENGLMFMEVSAKSRENIEEAFVKTAESIYK 169
>Medtr6g021790.1 | small GTPase family RAB protein | HC |
chr6:7514453-7508570 | 20130731
Length = 211
Score = 95.9 bits (237), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 87/178 (48%), Gaps = 49/178 (27%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GK+ L+L+F +F + TIG F ++L+++ +K IWDTAGQE + + Y
Sbjct: 16 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMLTIDSRPIKLQIWDTAGQESFRSITRSY 75
Query: 62 YRGAASAIVVYDITSM-----------------------------------------DGE 80
YRGAA A++VYDIT +GE
Sbjct: 76 YRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTITLIGNKCDLSHRRAVSKEEGE 135
Query: 81 EYAKENGMTFFETSAKTAQNVNELFYEIAKRLAKA------NPSRQT-GIKLQ-SRPQ 130
++AKENG+ F E SAKTAQNV E F + A ++ + + S +T GIK+ RPQ
Sbjct: 136 QFAKENGLLFMEASAKTAQNVEEAFIKTAAKILQNIQDGVFDVSNETCGIKVGYGRPQ 193
>Medtr2g027660.1 | RAB GTPase-like protein C2B | HC |
chr2:10132029-10135733 | 20130731
Length = 211
Score = 94.4 bits (233), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 76/154 (49%), Gaps = 41/154 (26%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GK+ L+L+F +F + TIG F ++++++ +K IWDTAGQE + + Y
Sbjct: 16 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSY 75
Query: 62 YRGAASAIVVYDIT-----------------------------------------SMDGE 80
YRGAA A++VYDIT + +GE
Sbjct: 76 YRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGE 135
Query: 81 EYAKENGMTFFETSAKTAQNVNELFYEIAKRLAK 114
++AKENG+ F E SAKTAQNV E F + A + K
Sbjct: 136 QFAKENGLIFMEASAKTAQNVEEAFIKTAGTIYK 169
>Medtr2g075950.1 | RAB GTPase-like protein A1D | HC |
chr2:31789231-31793100 | 20130731
Length = 217
Score = 92.4 bits (228), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 88/194 (45%), Gaps = 56/194 (28%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GK++L+ RF K +F+ +STIG F T+ L+++ +K IWDTAGQERY + Y
Sbjct: 23 GVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIWDTAGQERYRAITSAY 82
Query: 62 YRGAASAIVVYDIT-----------------------------------------SMDGE 80
YRGA A++VYD+T + DG+
Sbjct: 83 YRGAVGALLVYDVTRHATFENVDRWLKELRNHTDSNIVVMLVGNKADLRHLVAVSTEDGK 142
Query: 81 EYAKENGMTFFETSAKTAQNVNELFYEIAKRLAK---------------ANPSRQTGIKL 125
YA++ + F ETSA A NV F E+ ++ + + P++ I L
Sbjct: 143 SYAEKESLYFMETSALEATNVENAFAEVLTQIYRIVSKKAVEGAENGNASVPAKGEKIDL 202
Query: 126 QSRPQERRRMFCCA 139
++ +R+ CC+
Sbjct: 203 KNDVSALKRVGCCS 216
>Medtr1g068730.1 | RAB GTPase-like protein A5B | HC |
chr1:29344444-29337634 | 20130731
Length = 216
Score = 90.9 bits (224), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 78/161 (48%), Gaps = 46/161 (28%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GK+ L+LRF G F+ +TIG F + + L+ +K IWDTAGQER+ + Y
Sbjct: 25 GVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAY 84
Query: 62 YRGAASAIVVYDIT--------------------------------SMD----------G 79
YRGA ++VYD+T MD G
Sbjct: 85 YRGAMGILLVYDVTDESSFNNIKNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKG 144
Query: 80 EEYAKENGMTFFETSAKTAQNVNELFYEIAK----RLAKAN 116
+ A E G+ FFETSAKT NV+E+F+ IA+ RLA+++
Sbjct: 145 QALADEYGIKFFETSAKTNMNVDEVFFSIARDIKQRLAESD 185
>Medtr8g031830.1 | small GTPase family RAB protein | HC |
chr8:11916853-11917491 | 20130731
Length = 198
Score = 90.9 bits (224), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 72/145 (49%), Gaps = 41/145 (28%)
Query: 1 MGTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPM 60
+G GK+ L+L+F +F + ++TIG F + +++N VK IWDTAGQER+ +
Sbjct: 15 IGVGKSCLLLQFTDNRFQRFHDTTIGVEFGIRTININNNPVKLQIWDTAGQERFSSITKS 74
Query: 61 YYRGAASAIVVYDIT-----------------------------------------SMDG 79
YYR AA A++VYDIT + +G
Sbjct: 75 YYRKAADALLVYDITRRETFDHMATWLEDARQHASSDTIIMLIGNKSDLACNRVVSTEEG 134
Query: 80 EEYAKENGMTFFETSAKTAQNVNEL 104
E++ KENG+ F E SAK+ +N+ E+
Sbjct: 135 EKFTKENGLMFMEVSAKSRENIEEV 159
>Medtr1g068740.1 | RAB GTPase-like protein A5B | HC |
chr1:29352144-29345511 | 20130731
Length = 216
Score = 90.1 bits (222), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 77/161 (47%), Gaps = 46/161 (28%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GK+ L+LRF G F+ +TIG F + + L+ +K IWDTAGQER+ + Y
Sbjct: 25 GVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAY 84
Query: 62 YRGAASAIVVYDIT--------------------------------SMD----------G 79
YRGA ++VYD+T MD G
Sbjct: 85 YRGAMGILLVYDVTDESSFNNIKNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKG 144
Query: 80 EEYAKENGMTFFETSAKTAQNVNELFYEIAK----RLAKAN 116
+ A E G+ FFETSAKT NV E+F+ IA+ RLA+++
Sbjct: 145 QALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQRLAESD 185
>Medtr1g115325.1 | RAB GTPase-like protein A5B | HC |
chr1:52031011-52034310 | 20130731
Length = 215
Score = 90.1 bits (222), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 81/176 (46%), Gaps = 47/176 (26%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GK+ L+LRF G F+ +TIG F + + L+ +K IWDTAGQER+ + Y
Sbjct: 25 GVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAY 84
Query: 62 YRGAASAIVVYDIT--------------------------------SMD----------G 79
YRGA ++VYD+T MD G
Sbjct: 85 YRGAMGILLVYDVTDEASFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKG 144
Query: 80 EEYAKENGMTFFETSAKTAQNVNELFYEIAK----RLAKANPSRQT-GIKLQSRPQ 130
+ A E G+ FFETSAKT NV E+F+ IA+ RLA S + IK+ + Q
Sbjct: 145 QALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQRLADTVSSTEPQSIKINQQDQ 200
>Medtr7g100020.2 | RAB GTPase-like protein A5B | HC |
chr7:40194971-40198587 | 20130731
Length = 216
Score = 89.7 bits (221), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 78/171 (45%), Gaps = 46/171 (26%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GK+ L+LRF G F+ +TIG F + + L+ +K IWDTAGQER+ + Y
Sbjct: 25 GVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAY 84
Query: 62 YRGAASAIVVYDIT--------------------------------SMD----------G 79
YRGA ++VYD+T MD G
Sbjct: 85 YRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKG 144
Query: 80 EEYAKENGMTFFETSAKTAQNVNELFYEIAKRLAKANPSRQTGIKLQSRPQ 130
+ A E G+ FFETSAKT NV E+F+ IA+ + + R +S PQ
Sbjct: 145 QALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQ----RLADTDSKSEPQ 191
>Medtr7g100020.1 | RAB GTPase-like protein A5B | HC |
chr7:40194971-40198610 | 20130731
Length = 216
Score = 89.7 bits (221), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 78/171 (45%), Gaps = 46/171 (26%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GK+ L+LRF G F+ +TIG F + + L+ +K IWDTAGQER+ + Y
Sbjct: 25 GVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAY 84
Query: 62 YRGAASAIVVYDIT--------------------------------SMD----------G 79
YRGA ++VYD+T MD G
Sbjct: 85 YRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKG 144
Query: 80 EEYAKENGMTFFETSAKTAQNVNELFYEIAKRLAKANPSRQTGIKLQSRPQ 130
+ A E G+ FFETSAKT NV E+F+ IA+ + + R +S PQ
Sbjct: 145 QALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQ----RLADTDSKSEPQ 191
>Medtr8g031660.1 | RAB GTPase-like protein A5B | LC |
chr8:11902753-11902127 | 20130731
Length = 208
Score = 89.0 bits (219), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 75/164 (45%), Gaps = 41/164 (25%)
Query: 1 MGTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPM 60
+G GK+ L+ RF F + TIG F + +++ +K IWDTAGQE + +
Sbjct: 15 IGVGKSCLLFRFTDNSFKPIHDITIGVEFGIKFINIKNNRIKLHIWDTAGQETFRSITRS 74
Query: 61 YYRGAASAIVVYDIT-----------------------------------------SMDG 79
YYRGAA A++VYDIT + +
Sbjct: 75 YYRGAAGALLVYDITKRETFNHLATWLEEVREHGNSNTIITLVGNKSDLAKKRVVSTEEA 134
Query: 80 EEYAKENGMTFFETSAKTAQNVNELFYEIAKRLAKANPSRQTGI 123
E++AKENG+ F E SAK+++N+ E F + A+ + K G+
Sbjct: 135 EKFAKENGLMFMEVSAKSSENIEEAFVKTAESIYKKIEDGDVGV 178
>Medtr2g005510.1 | RAB GTPase-like protein A1D | HC |
chr2:188783-187481 | 20130731
Length = 220
Score = 86.3 bits (212), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 80/174 (45%), Gaps = 51/174 (29%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GK++L+ RF + +F +STIG F T+ L + TVK IWDTAGQERY + Y
Sbjct: 25 GVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQERYRAITSAY 84
Query: 62 YRGAASAIVVYDIT-----------------------------------------SMDGE 80
YRGA A++VYD+T + D +
Sbjct: 85 YRGALGALLVYDVTKPTTFDNVTRWLKELRDHADANIVIMLIGNKTDLKHLRAVATEDAQ 144
Query: 81 EYAKENGMTFFETSAKTAQNVNELF-------YEI--AKRLAKAN-PSRQTGIK 124
YA++ G++F ETSA A NV + F Y I K L+ AN P+ IK
Sbjct: 145 SYAEKEGLSFIETSALEATNVEKAFQTTLGEIYRIISKKSLSTANEPAAAANIK 198
>Medtr4g064897.1 | RAB GTPase-like protein A1D | HC |
chr4:24249982-24247615 | 20130731
Length = 215
Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 85/194 (43%), Gaps = 57/194 (29%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GK++++ RF + +F +STIG F T+ L + TVK IWDTAGQERY + Y
Sbjct: 22 GVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAY 81
Query: 62 YRGAASAIVVYDITSM-----------------------------------------DGE 80
YRGA A++VYDIT DG+
Sbjct: 82 YRGAVGALLVYDITKRQTFDNVNRWLRELRDHADSNIVIMMAGNKSDLNHLRAVSEDDGQ 141
Query: 81 EYAKENGMTFFETSAKTAQNV--------NELFYEIAKRLAKAN-------PSRQTGIKL 125
A++ G++F ETSA A N+ E+++ ++K+ A P + T I +
Sbjct: 142 ALAEKEGLSFLETSALEATNIEKAFQTILTEIYHIVSKKALAAQEAAGTSLPGQGTTINV 201
Query: 126 QSRPQERRRMFCCA 139
+R CC+
Sbjct: 202 ADSSANTKRG-CCS 214
>Medtr4g063160.2 | RAB GTPase-like protein A5B | HC |
chr4:23386901-23382754 | 20130731
Length = 216
Score = 85.1 bits (209), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 85/192 (44%), Gaps = 54/192 (28%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAP-- 59
G GK+ L+LRF G F+ +TIG F + + L+ +K IWDTAGQER+ +
Sbjct: 25 GVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFSFVINNF 84
Query: 60 MYYRGAASAIVVYDIT--------------------------------SMD--------- 78
YYRGA ++VYD+T MD
Sbjct: 85 TYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTS 144
Query: 79 -GEEYAKENGMTFFETSAKTAQNVNELFYEIAK----RLAKA-NPSRQTGIKLQSRP--- 129
G+ A E G+ FFETSAKT NV E+F+ IA+ RLA N + T IK+
Sbjct: 145 KGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDNKAEPTTIKINQDSATG 204
Query: 130 --QERRRMFCCA 139
Q ++ CC
Sbjct: 205 SGQAAQKSACCG 216
>Medtr4g063160.1 | RAB GTPase-like protein A5B | HC |
chr4:23387260-23382754 | 20130731
Length = 216
Score = 85.1 bits (209), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 85/192 (44%), Gaps = 54/192 (28%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAP-- 59
G GK+ L+LRF G F+ +TIG F + + L+ +K IWDTAGQER+ +
Sbjct: 25 GVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFSFVINNF 84
Query: 60 MYYRGAASAIVVYDIT--------------------------------SMD--------- 78
YYRGA ++VYD+T MD
Sbjct: 85 TYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTS 144
Query: 79 -GEEYAKENGMTFFETSAKTAQNVNELFYEIAK----RLAKA-NPSRQTGIKLQSRP--- 129
G+ A E G+ FFETSAKT NV E+F+ IA+ RLA N + T IK+
Sbjct: 145 KGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDNKAEPTTIKINQDSATG 204
Query: 130 --QERRRMFCCA 139
Q ++ CC
Sbjct: 205 SGQAAQKSACCG 216
>Medtr2g083860.1 | RAB GTPase-like protein A1D | HC |
chr2:35195372-35201445 | 20130731
Length = 218
Score = 84.7 bits (208), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 72/152 (47%), Gaps = 41/152 (26%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GK++L+ RF + +F+ +STIG F T+ L+++ +K IWDTAGQERY + Y
Sbjct: 23 GVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLTVDAKVIKAQIWDTAGQERYRAITSAY 82
Query: 62 YRGAASAIVVYDIT-----------------------------------------SMDGE 80
YRGA A++VYD+T + DG+
Sbjct: 83 YRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGNKSDLRHLVAVPTEDGK 142
Query: 81 EYAKENGMTFFETSAKTAQNVNELFYEIAKRL 112
+A+ + F ETSA A NV F E+ ++
Sbjct: 143 SFAERESLYFMETSALEATNVENAFTEVLSQI 174
>Medtr5g013900.1 | RAB GTPase-like protein B1C | HC |
chr5:4581017-4585541 | 20130731
Length = 207
Score = 84.3 bits (207), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 78/169 (46%), Gaps = 48/169 (28%)
Query: 4 GKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMYYR 63
GKTS++ RF+ +F ++TIG F ++ + L + TV+ +WDTAGQER+ L P Y R
Sbjct: 21 GKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIR 80
Query: 64 GAASAIVVYDITSM-----------------------------------------DGEEY 82
++ A++VYD+ S DGE
Sbjct: 81 DSSVAVIVYDVASRQTFLNTTKWIEEVRTERGSDVIIVLVGNKTDLVEKRQVSIEDGEAK 140
Query: 83 AKENGMTFFETSAKTAQNVNELFYEIAKRLAKANPSRQTGIKLQSRPQE 131
A+E + F ETSAK N+ LF +++A A P +T L S QE
Sbjct: 141 ARELNVMFIETSAKAGFNIKALF----RKIAAALPGMET---LSSAKQE 182
>Medtr4g088090.1 | RAB GTPase-like protein A1D | HC |
chr4:34699316-34702141 | 20130731
Length = 217
Score = 83.6 bits (205), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 51/74 (68%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GK++L+ RF K +FS +STIG F T+ + +++ VK IWDTAGQERY + Y
Sbjct: 23 GVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQERYRAITSAY 82
Query: 62 YRGAASAIVVYDIT 75
YRGA A++VYD+T
Sbjct: 83 YRGAVGALLVYDVT 96
>Medtr2g014990.1 | RAB GTPase-like protein A1D | HC |
chr2:4375511-4372352 | 20130731
Length = 217
Score = 83.2 bits (204), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 51/74 (68%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GK++L+ RF K +FS +STIG F T+ + +++ VK IWDTAGQERY + Y
Sbjct: 23 GVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAY 82
Query: 62 YRGAASAIVVYDIT 75
YRGA A++VYD+T
Sbjct: 83 YRGAVGALLVYDVT 96
>Medtr8g089985.1 | RAB GTPase-like protein A1D | HC |
chr8:37627491-37624788 | 20130731
Length = 225
Score = 83.2 bits (204), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 69/147 (46%), Gaps = 41/147 (27%)
Query: 3 TGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMYY 62
GK+ ++ RF + +FS +STIG F T+ L ++ TVK IWDTAGQERY + YY
Sbjct: 28 VGKSQILARFSRNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQIWDTAGQERYRAVTSAYY 87
Query: 63 RGAASAIVVYDIT-----------------------------------------SMDGEE 81
RGA A++VYDIT + D +E
Sbjct: 88 RGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILVGNKSDLENQRDVPTEDAKE 147
Query: 82 YAKENGMTFFETSAKTAQNVNELFYEI 108
+A++ G+ F ETSA A NV F +
Sbjct: 148 FAEKEGLFFLETSALQATNVEASFMTV 174
>Medtr2g096550.1 | RAB GTPase-like protein A1D | HC |
chr2:41238336-41235628 | 20130731
Length = 213
Score = 83.2 bits (204), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 76/167 (45%), Gaps = 49/167 (29%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GK+SL+LRF F+ +T+G + + + L+ + +WDTAGQER+ + Y
Sbjct: 25 GVGKSSLLLRFSDSYFTTSYITTLGIDYKNRAIELDGKKIMLQVWDTAGQERFRTITTAY 84
Query: 62 YRGAASAIVVYDIT---------------------------------SMD---------- 78
YRGA ++VYD+T MD
Sbjct: 85 YRGAMGILLVYDVTDESSFNNITNWIRSIEQHSSDNIVNKILVGNKVDMDESKRAVPFSK 144
Query: 79 GEEYAKENGMTFFETSAKTAQNVNELFYEIAKRL------AKANPSR 119
G+ A + G+ FFETSAKT NV+E F+ IA+ + +K PSR
Sbjct: 145 GQALANKYGIKFFETSAKTNLNVDEAFFSIARDIKQRLPDSKKTPSR 191
>Medtr4g079350.1 | RAB GTPase-like protein C2B | HC |
chr4:30648654-30646057 | 20130731
Length = 217
Score = 83.2 bits (204), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 51/74 (68%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GK++L+ RF K +FS +STIG F T+ + +++ VK IWDTAGQERY + Y
Sbjct: 23 GVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKIVKAQIWDTAGQERYRAITSAY 82
Query: 62 YRGAASAIVVYDIT 75
YRGA A++VYD+T
Sbjct: 83 YRGAVGALLVYDVT 96
>Medtr3g087160.1 | RAB GTPase-like protein B1C | HC |
chr3:39530214-39525780 | 20130731
Length = 206
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 72/150 (48%), Gaps = 41/150 (27%)
Query: 4 GKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMYYR 63
GKTS++ RF+ +F ++TIG F ++ + L + TV+ +WDTAGQER+ L P Y R
Sbjct: 21 GKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIR 80
Query: 64 GAASAIVVYDITSM-----------------------------------------DGEEY 82
++ A++VYD+ + +G+
Sbjct: 81 DSSVAVIVYDVANRQSFLNTNKWVEEVRAERGSDVIIVLVGNKTDLVEKRQVSIEEGDAK 140
Query: 83 AKENGMTFFETSAKTAQNVNELFYEIAKRL 112
++E+G+ F ETSAK N+ LF +IA L
Sbjct: 141 SRESGIMFIETSAKAGFNIKPLFRKIASAL 170
>Medtr0262s0050.1 | RAB GTPase-like protein A1D | HC |
scaffold0262:13029-14834 | 20130731
Length = 222
Score = 82.0 bits (201), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 69/158 (43%), Gaps = 41/158 (25%)
Query: 3 TGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMYY 62
GKT L+ RF + +F ++TIG F T+ L ++ TVK IWDTAGQERY + YY
Sbjct: 26 VGKTQLLGRFARNEFKVDSKATIGVEFQTKTLIIDNKTVKAQIWDTAGQERYRAVTSAYY 85
Query: 63 RGAASAIVVYDITSM-----------------------------------------DGEE 81
RGA A++VYD+T D EE
Sbjct: 86 RGAVGAMLVYDMTKRQSFDHMARWLEELRSHADKNIVIMLIGNKCDLSYLRAVPMEDAEE 145
Query: 82 YAKENGMTFFETSAKTAQNVNELFYEIAKRLAKANPSR 119
+A+ + F ETSA A NV F I + + N +
Sbjct: 146 FAQRENLFFMETSALEATNVETCFLTILTEIYRINAKK 183
>Medtr1g062760.1 | RAB GTPase-like protein A5B | HC |
chr1:27495849-27498608 | 20130731
Length = 211
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 82/187 (43%), Gaps = 52/187 (27%)
Query: 3 TGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMYY 62
GK+SL++ F+ G E TIG F ++L++ +K IWDTAGQER+ L YY
Sbjct: 25 VGKSSLLVSFISGSV-EDPAPTIGVDFKIKLLTVGGKRLKLTIWDTAGQERFRTLTSSYY 83
Query: 63 RGAASAIVVYDIT-------------------------------------------SMDG 79
RGA I+VYD+T + +G
Sbjct: 84 RGAQGIILVYDVTRRETFTNLSEVWSKEVELYSTNQDCMKMLVGNKVDRESERTVSTEEG 143
Query: 80 EEYAKENGMTFFETSAKTAQNVNELFYEIAKRLAKANPSRQTG--------IKLQSRPQE 131
AKE G +FFE SAKT +NV++ F E+A ++ + + G +K + PQ
Sbjct: 144 LALAKEFGCSFFECSAKTRENVDKCFEELALKIMEVPSLLEEGSTSVKRNILKQKHEPQA 203
Query: 132 RRRMFCC 138
+ CC
Sbjct: 204 SQDGGCC 210
>Medtr8g090215.1 | RAB GTPase-like protein B1C | HC |
chr8:37854485-37851712 | 20130731
Length = 207
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 71/150 (47%), Gaps = 41/150 (27%)
Query: 4 GKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMYYR 63
GKTS++ RF+ +F ++TIG F ++ + L + TV+ +WDTAGQER+ L P Y R
Sbjct: 21 GKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIR 80
Query: 64 GAASAIVVYDITSM-----------------------------------------DGEEY 82
++ A++VYD+ + +G+
Sbjct: 81 DSSVAVIVYDVANRQSFLNTNKWVEEVRQERGSDVIIVLVGNKTDLVEKRQVSIEEGDAK 140
Query: 83 AKENGMTFFETSAKTAQNVNELFYEIAKRL 112
+KE G+ F ETSAK N+ LF +IA L
Sbjct: 141 SKEFGIMFIETSAKAGFNIKPLFRKIASAL 170
>Medtr8g006970.1 | RAB GTPase-like protein A5D | HC |
chr8:1147960-1144960 | 20130731
Length = 217
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 83/186 (44%), Gaps = 49/186 (26%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GK+ L+LRF + + STIG F + + + T+K IWDTAGQER+ + Y
Sbjct: 32 GVGKSCLLLRFADDSYIDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSY 91
Query: 62 YRGAASAIVVYDITSMD-----------------------------------------GE 80
YRGA I+VYD+T + +
Sbjct: 92 YRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKSDLTANRAVSYDTAK 151
Query: 81 EYAKENGMTFFETSAKTAQNVNELFYEIA----KRLA---KANPSRQTGIKLQSRPQERR 133
E+A + G+ F ETSAK A NV F +A R+A AN +R ++++ +P ++
Sbjct: 152 EFADQIGIPFMETSAKDATNVEGAFMAMAAAIKDRMASQPSANNARPPTVQIRGQPVGQK 211
Query: 134 RMFCCA 139
CC+
Sbjct: 212 SG-CCS 216
>Medtr8g036220.1 | RAB GTPase-like protein A1D | HC |
chr8:13393739-13391340 | 20130731
Length = 229
Score = 81.6 bits (200), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 86/202 (42%), Gaps = 64/202 (31%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GK+ L+ RFV+ +F ++TIG F T+ + ++ VK IWDTAGQERY + Y
Sbjct: 26 GVGKSQLLNRFVRNEFHLKSKATIGVEFLTKTVLMDHKLVKAQIWDTAGQERYQAITTAY 85
Query: 62 YRGAASAIVVYDITSM-----------------------------------------DGE 80
YRGA A++ YDIT + E
Sbjct: 86 YRGATGALLTYDITKRHTFNHIEKWLDELHNHADKNIVVMLVGNKSDLSSIREVPIEEAE 145
Query: 81 EYAKENGMTFFETSAKTAQNV--------NELFYEIAKRLAKANPSRQT---------GI 123
+ AK+ G+ F ETSA + NV ++++ ++K+ A+ + G
Sbjct: 146 DLAKQKGLFFIETSALDSNNVEPAFLGLLSQIYVTMSKKHITADGRERNWDKVNLEFEGT 205
Query: 124 KLQSRPQE------RRRMFCCA 139
KL QE ++R CC+
Sbjct: 206 KLLVSSQEPECQKSKKRFSCCS 227
>Medtr3g069510.1 | RAB GTPase-like protein A1D | HC |
chr3:31090285-31088261 | 20130731
Length = 216
Score = 80.9 bits (198), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 78/174 (44%), Gaps = 45/174 (25%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GK++++ RF + +F +STIG F T+ + + TVK IWDTAGQERY + Y
Sbjct: 22 GVGKSNILSRFTRNEFCLESKSTIGVEFATRTIQVEGKTVKAQIWDTAGQERYRAITSAY 81
Query: 62 YRGAASAIVVYDIT-----------------------------------------SMDGE 80
YRGA A++VYDIT S D +
Sbjct: 82 YRGAVGALLVYDITKRQTFENVQRWLRELRDHADSNIVIMLAGNKSDLNHLRAVSSDDAQ 141
Query: 81 EYAKENGMTFFETSAKTAQNVNELF----YEIAKRLAKANPSRQTGIKLQSRPQ 130
A++ ++F ETSA A NV + F ++I + ++K + Q S P
Sbjct: 142 NLAEKETLSFLETSALEALNVEKAFQTILFDIYQIISKKALAAQESASTTSVPH 195
>Medtr3g086980.1 | RAB GTPase-like protein A1D | HC |
chr3:39434756-39431186 | 20130731
Length = 222
Score = 80.9 bits (198), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 67/147 (45%), Gaps = 41/147 (27%)
Query: 3 TGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMYY 62
GK+ ++ RF + FS ++TIG F T+ L + +VK IWDTAGQERY + YY
Sbjct: 27 VGKSQILARFARNDFSMDSKATIGVEFQTRTLVIEHKSVKAQIWDTAGQERYRAVTSAYY 86
Query: 63 RGAASAIVVYDIT-----------------------------------------SMDGEE 81
RGA A++VYDIT + D +E
Sbjct: 87 RGAVGAMLVYDITKRPSFDHIPRWLEELRNHADKNIVIILIGNKSDLEEQRAVPTEDAKE 146
Query: 82 YAKENGMTFFETSAKTAQNVNELFYEI 108
+A++ G+ F ETSA A NV F +
Sbjct: 147 FAEKEGLFFLETSALQATNVETAFMTV 173
>Medtr1g052475.1 | RAB GTPase-like protein A1D | HC |
chr1:21336471-21339658 | 20130731
Length = 223
Score = 80.9 bits (198), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 75/168 (44%), Gaps = 49/168 (29%)
Query: 4 GKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMYYR 63
GKT L+ RF + QF+ ++TIG F T+ L ++ TVK IWDTAGQERY + YYR
Sbjct: 27 GKTQLLARFSRNQFNVDSKATIGVEFQTKTLVIDNKTVKAQIWDTAGQERYRAVTSAYYR 86
Query: 64 GAASAIVVYDIT-----------------------------------------SMDGEEY 82
GA A++VYD+T + D +E+
Sbjct: 87 GAVGAMLVYDMTKRQSFDHMARWLEELRGHADTNIVIMLIGNKCDLGTLKAVPTEDAQEF 146
Query: 83 AKENGMTFFETSAKTAQNV--------NELFYEIAKRLAKANPSRQTG 122
A+ + F ETSA + NV E++ I+K+ AN G
Sbjct: 147 AQRENLFFMETSALESTNVETAFLTILTEIYRLISKKTLTANDEADPG 194
>Medtr2g005500.1 | RAB GTPase-like protein B1C | HC |
chr2:184631-186040 | 20130731
Length = 203
Score = 80.5 bits (197), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 79/184 (42%), Gaps = 49/184 (26%)
Query: 4 GKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMYYR 63
GK+ L+LRF + + STIG F + + L T K IWDTAGQER+ + YYR
Sbjct: 21 GKSCLLLRFADDSYDDTYISTIGVDFKIRTVELEGKTAKLQIWDTAGQERFRTITSSYYR 80
Query: 64 GAASAIVVYDITSMD-----------------------------------------GEEY 82
GA I+VYD+T ++ + +
Sbjct: 81 GAHGIIIVYDVTDIESFNNVKQWLHEIDRYANHSVSKLLVGNKCDLTDNKLVHTHTAKAF 140
Query: 83 AKENGMTFFETSAKTAQNVNELFYEIAKRLAKANPSRQTG-------IKLQSRPQERRRM 135
A E G+ F ETSAK + NV + F +A + S+ TG ++++ +P ++
Sbjct: 141 ADELGIPFLETSAKDSINVEQAFLTMAAEIKNKMGSQPTGSKSAAESVQMKGQPIQQNTN 200
Query: 136 FCCA 139
CC
Sbjct: 201 -CCG 203
>Medtr7g081700.1 | RAB GTPase-like protein B1C | HC |
chr7:31228785-31232855 | 20130731
Length = 202
Score = 80.1 bits (196), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 83/185 (44%), Gaps = 48/185 (25%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GK+ L+LRF + + STIG F + + + T+K IWDTAGQER+ + Y
Sbjct: 18 GVGKSCLLLRFADDSYIDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSY 77
Query: 62 YRGAASAIVVYDITSMDG-----------EEYAKEN------------------------ 86
YRGA I+VYD+T + + YA +N
Sbjct: 78 YRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKCDLTSERAVSYDTAK 137
Query: 87 ------GMTFFETSAKTAQNVNELFYEIA----KRLAK--ANPSRQTGIKLQSRPQERRR 134
G+ F ETSAK + NV + F +A R+A N +R ++++ +P ++
Sbjct: 138 AFADEIGIPFMETSAKDSTNVEQAFMAMASSIKDRMASQPTNNARPPTVQIRGQPVGQKS 197
Query: 135 MFCCA 139
CC+
Sbjct: 198 G-CCS 201
>Medtr7g103070.1 | RAB GTPase-like protein C2B | HC |
chr7:41440857-41436532 | 20130731
Length = 214
Score = 80.1 bits (196), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 78/189 (41%), Gaps = 51/189 (26%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GK+ L++ F+ E TIG F ++L++ +K IWDTAGQER+ L Y
Sbjct: 26 GVGKSCLLVTFISNSSVEDLSPTIGVDFKIKMLTVGGKRLKLTIWDTAGQERFRTLTSSY 85
Query: 62 YRGAASAIVVYDITSM-------------------------------------------D 78
YRGA I+VYD+T +
Sbjct: 86 YRGAQGIILVYDVTRRETFTNLSEVWSKELELYSTNQECVKMLVGNKVDKDSERAVSREE 145
Query: 79 GEEYAKENGMTFFETSAKTAQNVNELFYEIAKRLAKANPSRQTG--------IKLQSRPQ 130
G AKE G E SAKT +NV + F E+A ++ +A + G +K + PQ
Sbjct: 146 GLSLAKELGCLLLECSAKTRENVEKCFEELALKIMEAPSLLEEGSAATKRNVLKQKQEPQ 205
Query: 131 ERRRMFCCA 139
+ CC+
Sbjct: 206 SSQNGGCCS 214
>Medtr8g027220.1 | Ras-related small GTP-binding family protein | HC
| chr8:9528022-9525895 | 20130731
Length = 232
Score = 79.7 bits (195), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 70/151 (46%), Gaps = 41/151 (27%)
Query: 3 TGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMYY 62
GKT ++ RF K +F +STIG F T+ +++N +K IWDTAGQERY + YY
Sbjct: 37 VGKTQILSRFSKNEFCFDSKSTIGVEFQTRTVTINGKVIKAQIWDTAGQERYRAVTSAYY 96
Query: 63 RGAASAIVVYDIT-----------------------------------------SMDGEE 81
RGA A++VYDIT + D E
Sbjct: 97 RGALGAMLVYDITKRQSFDHVAKWVEELRAHADNSIVIMLVGNKGDLVDLRMVPTEDAVE 156
Query: 82 YAKENGMTFFETSAKTAQNVNELFYEIAKRL 112
+A++ G+ F ETSA T NV F ++ + +
Sbjct: 157 FAEDQGLFFSETSALTGVNVEGAFMKLLEEI 187
>Medtr4g098950.1 | RAB GTPase-like protein B1C | HC |
chr4:40881047-40875458 | 20130731
Length = 206
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 69/150 (46%), Gaps = 41/150 (27%)
Query: 4 GKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMYYR 63
GKTS++ RF+ +F ++TIG F ++ + L + TV+ +WDTAGQER+ L P Y R
Sbjct: 21 GKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIR 80
Query: 64 GAASAIVVYDITSM-----------------------------------------DGEEY 82
++ A++VYD+ S +GE
Sbjct: 81 DSSVAVIVYDVASRQTFLNTSKWIEEVRSERGSDVIVVLVGNKTDLVEKRQVSTEEGEAK 140
Query: 83 AKENGMTFFETSAKTAQNVNELFYEIAKRL 112
++E + F E SAK N+ LF +IA L
Sbjct: 141 SRELNVMFIEASAKAGFNIKALFRKIAAAL 170
>Medtr8g092020.1 | RAB GTPase-like protein A1D | HC |
chr8:38407885-38409949 | 20130731
Length = 209
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 75/157 (47%), Gaps = 48/157 (30%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GKTSL+ ++V +FS+ ++TIGA F T+ L +++ V IWDTAGQER+H L +
Sbjct: 22 GVGKTSLMNQYVYKKFSQQYKATIGADFVTKELLVDDKLVTLQIWDTAGQERFHSLGAAF 81
Query: 62 YRGAASAIVVYDIT------------------------------------SMDG------ 79
YRGA ++VYD+ +DG
Sbjct: 82 YRGADCCVLVYDVNIHKTFDTLNNWHDDFLKQADTGNPDAFPFVLLGNKVDVDGGNSRRV 141
Query: 80 -EEYAKE-----NGMTFFETSAKTAQNVNELFYEIAK 110
E+ A+E + +FETSAK NV++ F +AK
Sbjct: 142 TEKKAREWCASRGSIPYFETSAKEGYNVDDAFLCVAK 178
>Medtr7g051940.1 | RAB GTPase-like protein A1D | HC |
chr7:18234251-18230040 | 20130731
Length = 215
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 73/160 (45%), Gaps = 42/160 (26%)
Query: 3 TGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMYY 62
GK++L+ RF + +F ++TIG F TQ++ ++ VK IWDTAGQER+ + YY
Sbjct: 24 VGKSNLLSRFARNEFDSNSKATIGVEFQTQMVEIDGKEVKAQIWDTAGQERFRAVTSAYY 83
Query: 63 RGAASAIVVYDITSM-----------------------------------------DGEE 81
RGA A+VVYDI+ +G+
Sbjct: 84 RGAFGALVVYDISRRGTFESIKRWLDELTTQNDSTVARMLVGNKCDLENIREVSIEEGKA 143
Query: 82 YAKENGMTFFETSAKTAQNVNELFYEIAKRLAKANPSRQT 121
A+E G+ F ETSA + NV F EI R N SR+
Sbjct: 144 LAEEEGLFFMETSALDSTNVQTAF-EIVIREIYNNISRKV 182
>Medtr7g405790.1 | RAB GTPase-like protein A1D | HC |
chr7:264041-266047 | 20130731
Length = 220
Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 74/160 (46%), Gaps = 42/160 (26%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
GK++L+ R+ + +F+ + ++TIG F TQ L ++ VK IWDTAGQER+ + Y
Sbjct: 25 AVGKSNLLSRYARNEFNLHSKATIGVEFQTQSLEIDSKEVKAQIWDTAGQERFRAVTSAY 84
Query: 62 YRGAASAIVVYDI---TSMD--------------------------------------GE 80
YRGA A++VYDI T+ D G+
Sbjct: 85 YRGAVGALIVYDISRRTTFDSVGRWLDELKTHCDTTVAMMLVGNKCDLDNIRDVSIEEGK 144
Query: 81 EYAKENGMTFFETSAKTAQNVNELFYEIAKRLAKANPSRQ 120
A+ G+ F ETSA + NV F E+ R N SR+
Sbjct: 145 SLAESEGLFFMETSALDSTNVKTAF-EMVIREIYNNVSRK 183
>Medtr7g117910.1 | small GTPase family RAB protein | HC |
chr7:48931651-48932623 | 20130731
Length = 212
Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 48/73 (65%)
Query: 3 TGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMYY 62
GKT ++ RF K +F +STIG F T+ +++N +K IWDTAGQERY + YY
Sbjct: 31 VGKTQMLSRFAKNEFCFDSKSTIGVEFQTRTVTINGKLIKAQIWDTAGQERYRAVTSAYY 90
Query: 63 RGAASAIVVYDIT 75
RGA A++VYDIT
Sbjct: 91 RGALGAMLVYDIT 103
>Medtr1g078200.1 | RAB GTPase-like protein C2B | HC |
chr1:34998790-34993821 | 20130731
Length = 224
Score = 77.4 bits (189), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 48/72 (66%)
Query: 4 GKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMYYR 63
GK++L+ RF + +F +STIG F TQ + +N VK IWDTAGQER+ + YYR
Sbjct: 26 GKSNLLARFARDEFYPNSKSTIGVEFQTQKMEINGKEVKAQIWDTAGQERFRAVTSAYYR 85
Query: 64 GAASAIVVYDIT 75
GA A++VYDI+
Sbjct: 86 GAVGALLVYDIS 97
>Medtr1g097420.1 | RAB GTPase-like protein A1D | HC |
chr1:43946590-43951820 | 20130731
Length = 207
Score = 77.0 bits (188), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 79/177 (44%), Gaps = 50/177 (28%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GKTSL+ ++V +FS+ ++TIGA F T+ L +++ V IWDTAGQER+ L +
Sbjct: 18 GVGKTSLMNQYVHNKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAF 77
Query: 62 YRGAASAIVVYDITSMDG--------EEYAKE---------------------------- 85
YRGA ++ YD+ M EE+ K+
Sbjct: 78 YRGADCCVLAYDVNVMRSFDSLDTWHEEFLKQANPPDTRAFPFILLGNKIDIDGGNSRVV 137
Query: 86 ------------NGMTFFETSAKTAQNVNELFYEIAKRLAKANPSRQTGIKLQSRPQ 130
+ +FETSAK NV+ F IAK A AN R+ I Q P+
Sbjct: 138 SEKKANDWCASKGNIPYFETSAKEDYNVDAAFLCIAK-TALAN-EREQDIYFQGIPE 192
>Medtr4g099470.1 | RAB GTPase-like protein A2D | HC |
chr4:41298313-41300214 | 20130731
Length = 178
Score = 76.6 bits (187), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 73/164 (44%), Gaps = 48/164 (29%)
Query: 23 STIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMYYRGAASAIVVYDITSMDG--- 79
STIG F + + + T+K IWDTAGQER+ + YYRGA IVVYD+T +
Sbjct: 15 STIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNN 74
Query: 80 --------EEYAKEN------------------------------GMTFFETSAKTAQNV 101
+ YA EN G+ F ETSAK A NV
Sbjct: 75 VKQWLNEIDRYASENVNKLLVGNKSDLSDKKVVSSETAKAFADEIGIPFMETSAKNASNV 134
Query: 102 NELFY----EIAKRLAK--ANPSRQTGIKLQSRPQERRRMFCCA 139
+ F EI R+A AN +R ++++ +P ++ CC+
Sbjct: 135 EQAFMAMAAEIKNRMASQPANSARPATVQIRGQPV-NQKAGCCS 177
>Medtr4g069850.1 | RAB GTPase-like protein A1D | HC |
chr4:26276568-26272817 | 20130731
Length = 206
Score = 76.6 bits (187), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 70/162 (43%), Gaps = 48/162 (29%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GKTSL+ ++V +FS ++TIGA F T+ + + IWDTAGQER+ L +
Sbjct: 18 GVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAF 77
Query: 62 YRGAASAIVVYDITSM--------------------DGEEY------------------- 82
YRGA ++VYD+ SM D E +
Sbjct: 78 YRGADCCVLVYDVNSMKSFDNLNNWREEFLIQANPSDPENFPFVVIGNKIDIDGGNSRVV 137
Query: 83 ---------AKENGMTFFETSAKTAQNVNELFYEIAKRLAKA 115
A + + +FETSAK NV E F IAK K+
Sbjct: 138 SEKKARAWCAAKGNIPYFETSAKEGINVEEAFQTIAKDALKS 179
>Medtr6g079550.1 | RAB GTPase-like protein A1D | HC |
chr6:30013567-30009535 | 20130731
Length = 216
Score = 76.6 bits (187), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 76/170 (44%), Gaps = 46/170 (27%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GK++L+ RF K +F + TIG F + + + + +K IWDTAGQER+ + Y
Sbjct: 22 GVGKSNLISRFTKDEFRLDSKPTIGVEFGYKNIKVRDKLIKAQIWDTAGQERFRAITSSY 81
Query: 62 YRGAASAIVVYDITSM-----------------------------------------DGE 80
YRGA A++VYDIT + +G+
Sbjct: 82 YRGALGAMLVYDITRIITFVNIKKWLHELREFGNEDMVIILVANKSDLSQSREVEKEEGK 141
Query: 81 EYAKENGMTFFETSAKTAQNVNELFYEIAKRL-----AKANPSRQTGIKL 125
+A++ G+ F ETSA NV + F E+ ++ K+ + G KL
Sbjct: 142 GFAEKEGLCFMETSALQNLNVEDAFLEMITKIHDIISHKSLEDKMNGTKL 191
>Medtr2g090865.1 | RAB GTPase-like protein A1D | HC |
chr2:39001995-38999681 | 20130731
Length = 215
Score = 76.3 bits (186), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 49/74 (66%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GK++L+ RF + +F+ +STIG F T+ + + + VK IWDTAGQERY + Y
Sbjct: 21 GVGKSNLLSRFTRNEFNLESKSTIGVEFATRSVRILDKLVKAQIWDTAGQERYRAITSAY 80
Query: 62 YRGAASAIVVYDIT 75
YRGA A++VYD T
Sbjct: 81 YRGAVGALLVYDST 94
>Medtr8g093740.1 | RAB GTPase-like protein A5B | HC |
chr8:39223227-39227011 | 20130731
Length = 208
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 67/154 (43%), Gaps = 44/154 (28%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GK+SL+LRF F + TIG F + +++ +K IWDTAGQER+ L Y
Sbjct: 23 GVGKSSLLLRFTSDDFDDLS-PTIGVDFKVKYVTIEGKKLKLAIWDTAGQERFRTLTSSY 81
Query: 62 YRGAASAIVVYD-------------------------------------------ITSMD 78
YRGA I+VYD +T +
Sbjct: 82 YRGAQGIIMVYDVTRRETFTNLSEIWAKEIDLYSTNQDCMKMLVGNKVDKEGDRVVTKKE 141
Query: 79 GEEYAKENGMTFFETSAKTAQNVNELFYEIAKRL 112
G ++A+E G F E SAKT NV + F E+ ++
Sbjct: 142 GIDFAREYGCLFIECSAKTRVNVQQCFEELVLKV 175
>Medtr8g093740.2 | RAB GTPase-like protein A5B | HC |
chr8:39223240-39227053 | 20130731
Length = 208
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 67/154 (43%), Gaps = 44/154 (28%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GK+SL+LRF F + TIG F + +++ +K IWDTAGQER+ L Y
Sbjct: 23 GVGKSSLLLRFTSDDFDDLS-PTIGVDFKVKYVTIEGKKLKLAIWDTAGQERFRTLTSSY 81
Query: 62 YRGAASAIVVYD-------------------------------------------ITSMD 78
YRGA I+VYD +T +
Sbjct: 82 YRGAQGIIMVYDVTRRETFTNLSEIWAKEIDLYSTNQDCMKMLVGNKVDKEGDRVVTKKE 141
Query: 79 GEEYAKENGMTFFETSAKTAQNVNELFYEIAKRL 112
G ++A+E G F E SAKT NV + F E+ ++
Sbjct: 142 GIDFAREYGCLFIECSAKTRVNVQQCFEELVLKV 175
>Medtr8g006970.2 | RAB GTPase-like protein A5D | HC |
chr8:1148710-1145036 | 20130731
Length = 181
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 65/149 (43%), Gaps = 41/149 (27%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GK+ L+LRF + + STIG F + + + T+K IWDTAGQER+ + Y
Sbjct: 18 GVGKSCLLLRFADDSYIDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSY 77
Query: 62 YRGAASAIVVYDITSMD-----------------------------------------GE 80
YRGA I+VYD+T + +
Sbjct: 78 YRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKSDLTANRAVSYDTAK 137
Query: 81 EYAKENGMTFFETSAKTAQNVNELFYEIA 109
E+A + G+ F ETSAK A NV F +A
Sbjct: 138 EFADQIGIPFMETSAKDATNVEGAFMAMA 166
>Medtr8g107070.1 | RAB GTPase-like protein A2D | HC |
chr8:45233889-45231298 | 20130731
Length = 265
Score = 75.5 bits (184), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 72/169 (42%), Gaps = 41/169 (24%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GK++L+ RF K +F + TIG F + + + + +K IWDTAGQER+ + Y
Sbjct: 24 GVGKSNLLSRFAKDEFRLDSKPTIGVEFAYRNIKVRDKLIKAQIWDTAGQERFRAITSSY 83
Query: 62 YRGAASAIVVYDIT----------------SMDGEE------------------------ 81
YRGA A++VYDIT GEE
Sbjct: 84 YRGALGALLVYDITRRSSYESVGRWLVELREFGGEEMVVILVGNKCDLGESREVEEEEAK 143
Query: 82 -YAKENGMTFFETSAKTAQNVNELFYEIAKRLAKANPSRQTGIKLQSRP 129
+A+ G+ F ETSA NV ++F ++ + R K+ P
Sbjct: 144 RFAEAEGLCFMETSALKNLNVEQVFLQMITTIFDITNQRSLDAKMDETP 192
>Medtr1g097420.2 | RAB GTPase-like protein A1D | HC |
chr1:43946590-43951820 | 20130731
Length = 234
Score = 74.7 bits (182), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 78/176 (44%), Gaps = 50/176 (28%)
Query: 3 TGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMYY 62
GKTSL+ ++V +FS+ ++TIGA F T+ L +++ V IWDTAGQER+ L +Y
Sbjct: 46 VGKTSLMNQYVHNKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFY 105
Query: 63 RGAASAIVVYDITSMDG--------EEYAKE----------------------------- 85
RGA ++ YD+ M EE+ K+
Sbjct: 106 RGADCCVLAYDVNVMRSFDSLDTWHEEFLKQANPPDTRAFPFILLGNKIDIDGGNSRVVS 165
Query: 86 -----------NGMTFFETSAKTAQNVNELFYEIAKRLAKANPSRQTGIKLQSRPQ 130
+ +FETSAK NV+ F IAK A AN R+ I Q P+
Sbjct: 166 EKKANDWCASKGNIPYFETSAKEDYNVDAAFLCIAKT-ALAN-EREQDIYFQGIPE 219
>Medtr1g090717.1 | RAB GTPase-like protein A5B | HC |
chr1:40716435-40711176 | 20130731
Length = 212
Score = 73.9 bits (180), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 84/188 (44%), Gaps = 50/188 (26%)
Query: 2 GTGKTSLVLRFVKGQFS-EYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPM 60
G GK+SL+L F+ S + TIG F ++ ++ + +K IWDTAGQER+ +
Sbjct: 25 GVGKSSLLLSFISNANSLDDLSPTIGVDFKIKLFTIGDKRLKLTIWDTAGQERFGTVICS 84
Query: 61 YYRGAASAIVVYDIT-------------------------------------------SM 77
YYRGA ++VYD+T
Sbjct: 85 YYRGAHGIVLVYDVTRRETFTNLVGTWAKEVGLYSTNHDCIKILVGNKVDKESERAVSKE 144
Query: 78 DGEEYAKENGMTFFETSAKTAQNVNELFYEIAKRLAKANPSRQTG-IKLQSRPQER---- 132
+G AKE+ F E SAKT +NV + F ++ ++ + R+ G ++++ + Q+R
Sbjct: 145 EGMALAKEHRCLFLECSAKTKENVQQCFKDLTLKILEVPSLREKGSVEVKRQKQKRFYET 204
Query: 133 -RRMFCCA 139
+R CC+
Sbjct: 205 SQRGGCCS 212
>Medtr1g068740.2 | RAB GTPase-like protein A5B | HC |
chr1:29352144-29345511 | 20130731
Length = 197
Score = 73.6 bits (179), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 46/74 (62%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GK+ L+LRF G F+ +TIG F + + L+ +K IWDTAGQER+ + Y
Sbjct: 25 GVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAY 84
Query: 62 YRGAASAIVVYDIT 75
YRGA ++VYD+T
Sbjct: 85 YRGAMGILLVYDVT 98
>Medtr4g012940.1 | RAB GTPase-like protein A1D | HC |
chr4:3466085-3469888 | 20130731
Length = 207
Score = 73.6 bits (179), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 69/167 (41%), Gaps = 48/167 (28%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GKTSL+ ++V +FS ++TIGA F T+ + + IWDTAGQER+ L +
Sbjct: 18 GVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAF 77
Query: 62 YRGAASAIVVYDITSM--------------------DGEEY------------------- 82
YRGA ++VYD+ M D E +
Sbjct: 78 YRGADCCVLVYDVNVMKSFENLNHWREEFLIQASPSDPENFPFVVLGNKIDVDGGNSRVV 137
Query: 83 ---------AKENGMTFFETSAKTAQNVNELFYEIAKRLAKANPSRQ 120
A + + +FETSAK NV F IAK K P +
Sbjct: 138 SEKKAKAWCASKGNIPYFETSAKEGFNVEAAFQCIAKNALKNEPEEE 184
>Medtr2g101890.1 | RAB GTPase-like protein A1D | HC |
chr2:43841412-43838102 | 20130731
Length = 209
Score = 73.2 bits (178), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 48/76 (63%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GKTSL+ ++V +FS ++TIGA F T+ + + + IWDTAGQER+ L +
Sbjct: 20 GVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQVEDRLFTLQIWDTAGQERFQSLGVAF 79
Query: 62 YRGAASAIVVYDITSM 77
YRGA ++VYD+ M
Sbjct: 80 YRGADCCVLVYDVNVM 95
>Medtr1g068730.2 | RAB GTPase-like protein A5B | HC |
chr1:29344444-29337634 | 20130731
Length = 171
Score = 72.8 bits (177), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 46/75 (61%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GK+ L+LRF G F+ +TIG F + + L+ +K IWDTAGQER+ + Y
Sbjct: 25 GVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAY 84
Query: 62 YRGAASAIVVYDITS 76
YRGA ++VYD+T
Sbjct: 85 YRGAMGILLVYDVTD 99
>Medtr1g029450.1 | small GTPase family RAB protein | HC |
chr1:10110413-10114701 | 20130731
Length = 215
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 79/180 (43%), Gaps = 52/180 (28%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GK++L+LRF F + TIG F + ++L +K IWDTAGQER+ L Y
Sbjct: 27 GVGKSTLLLRFTSDNFEDLS-PTIGVDFKVKYVTLGGKKLKLAIWDTAGQERFRTLTGSY 85
Query: 62 YRGAASAIVVYDIT--------------------------------SMDGE--------- 80
YRGA I+VYD+T +D E
Sbjct: 86 YRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKMLVGNKVDKESERAVTKKE 145
Query: 81 --EYAKENGMTFFETSAKTAQNVNELFYEIAKRLAKANPSR----QTGIK---LQSRPQE 131
++A++ G + E SAKT NV + F E+ ++ PS +G+K + +PQE
Sbjct: 146 AVDFARQYGCLYTECSAKTRVNVEQCFEELVMKILDT-PSLLAEGSSGVKKNIFKQKPQE 204
>Medtr3g096350.1 | small GTPase family RAB protein | HC |
chr3:44038043-44043862 | 20130731
Length = 207
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 64/154 (41%), Gaps = 44/154 (28%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GK+SL+L F F E TIG F + +++ +K IWDTAGQER+ L Y
Sbjct: 22 GVGKSSLLLCFTSDSF-ENLSPTIGVDFKVKYFTIDGKKLKLAIWDTAGQERFRTLTSSY 80
Query: 62 YRGAASAIVVYDITSMD------------------------------------------- 78
YRGA I+ YD+T D
Sbjct: 81 YRGAQGIIMAYDVTRRDTFTNLSEVWAKEVDLYSTNQDCIKMLVGNKVDKESDRVVTKKE 140
Query: 79 GEEYAKENGMTFFETSAKTAQNVNELFYEIAKRL 112
G ++A+E G F E SAKT NV F E+ ++
Sbjct: 141 GIDFAREYGCLFIECSAKTRVNVQHCFEELVLKI 174
>Medtr3g096350.3 | small GTPase family RAB protein | HC |
chr3:44038043-44042644 | 20130731
Length = 149
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 49/89 (55%), Gaps = 6/89 (6%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GK+SL+L F F E TIG F + +++ +K IWDTAGQER+ L Y
Sbjct: 22 GVGKSSLLLCFTSDSF-ENLSPTIGVDFKVKYFTIDGKKLKLAIWDTAGQERFRTLTSSY 80
Query: 62 YRGAASAIVVYDITSMD-----GEEYAKE 85
YRGA I+ YD+T D E +AKE
Sbjct: 81 YRGAQGIIMAYDVTRRDTFTNLSEVWAKE 109
>Medtr3g096350.2 | small GTPase family RAB protein | HC |
chr3:44038043-44042591 | 20130731
Length = 156
Score = 67.4 bits (163), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 49/89 (55%), Gaps = 6/89 (6%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GK+SL+L F F E TIG F + +++ +K IWDTAGQER+ L Y
Sbjct: 22 GVGKSSLLLCFTSDSF-ENLSPTIGVDFKVKYFTIDGKKLKLAIWDTAGQERFRTLTSSY 80
Query: 62 YRGAASAIVVYDITSMD-----GEEYAKE 85
YRGA I+ YD+T D E +AKE
Sbjct: 81 YRGAQGIIMAYDVTRRDTFTNLSEVWAKE 109
>Medtr1452s0010.1 | RAB GTPase-like protein G3A | HC |
scaffold1452:788-360 | 20130731
Length = 104
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 43/66 (65%)
Query: 12 FVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMYYRGAASAIVV 71
+V +FS+ ++TIGA F T+ L +++ V IWDTAGQER+ L +YRGA ++V
Sbjct: 1 YVHKKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLV 60
Query: 72 YDITSM 77
YD+ M
Sbjct: 61 YDVNVM 66
>Medtr7g103070.2 | RAB GTPase-like protein C2B | HC |
chr7:41440287-41436532 | 20130731
Length = 158
Score = 62.8 bits (151), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 65/159 (40%), Gaps = 53/159 (33%)
Query: 33 VLSLNEATVKFDIWDTAGQERYHCLAPMYYRGAASAIVVYDITSM--------------- 77
+L++ +K IWDTAGQER+ L YYRGA I+VYD+T
Sbjct: 1 MLTVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSEVWSKELE 60
Query: 78 ----------------------------DGEEYAKENGMTFFETSAKTAQNVNELFYEIA 109
+G AKE G E SAKT +NV + F E+A
Sbjct: 61 LYSTNQECVKMLVGNKVDKDSERAVSREEGLSLAKELGCLLLECSAKTRENVEKCFEELA 120
Query: 110 KRLAKANPS---------RQTGIKLQSRPQERRRMFCCA 139
++ +A PS ++ +K + PQ + CC+
Sbjct: 121 LKIMEA-PSLLEEGSAATKRNVLKQKQEPQSSQNGGCCS 158
>Medtr6g039490.1 | small GTPase family RAB protein | HC |
chr6:14294873-14291901 | 20130731
Length = 226
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 72/167 (43%), Gaps = 49/167 (29%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GKTSL+ ++ +FS + TIGA F T+ L ++ V IWDT G+E + + +
Sbjct: 18 GVGKTSLMNQYALKKFSLKCKGTIGADFVTKDLQIDNKLVTLQIWDTEGKETFQNVCADF 77
Query: 62 YRGAASAIVVYDI------------------------------------TSMDG------ 79
YRGA ++VYD+ +DG
Sbjct: 78 YRGADCCVLVYDVNCFESFDILDSWHDDFLKKGNTSNHGISPFILLGNKVDIDGGKSRVV 137
Query: 80 -EEYAK-----ENGMTFFETSAKTAQNVNELFYEIAKRLAKANPSRQ 120
E+ AK + + +FETSAK NV++ F IAK A AN Q
Sbjct: 138 PEKKAKKWCASKGNIPYFETSAKEDFNVDDAFLCIAKT-ALANERDQ 183
>Medtr8g093740.5 | RAB GTPase-like protein A5B | HC |
chr8:39223227-39227011 | 20130731
Length = 175
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 55/133 (41%), Gaps = 43/133 (32%)
Query: 23 STIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMYYRGAASAIVVYD--------- 73
ST G F + +++ +K IWDTAGQER+ L YYRGA I+VYD
Sbjct: 10 STTGVDFKVKYVTIEGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTN 69
Query: 74 ----------------------------------ITSMDGEEYAKENGMTFFETSAKTAQ 99
+T +G ++A+E G F E SAKT
Sbjct: 70 LSEIWAKEIDLYSTNQDCMKMLVGNKVDKEGDRVVTKKEGIDFAREYGCLFIECSAKTRV 129
Query: 100 NVNELFYEIAKRL 112
NV + F E+ ++
Sbjct: 130 NVQQCFEELVLKV 142
>Medtr8g093740.4 | RAB GTPase-like protein A5B | HC |
chr8:39223431-39227053 | 20130731
Length = 175
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 55/133 (41%), Gaps = 43/133 (32%)
Query: 23 STIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMYYRGAASAIVVYD--------- 73
ST G F + +++ +K IWDTAGQER+ L YYRGA I+VYD
Sbjct: 10 STTGVDFKVKYVTIEGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTN 69
Query: 74 ----------------------------------ITSMDGEEYAKENGMTFFETSAKTAQ 99
+T +G ++A+E G F E SAKT
Sbjct: 70 LSEIWAKEIDLYSTNQDCMKMLVGNKVDKEGDRVVTKKEGIDFAREYGCLFIECSAKTRV 129
Query: 100 NVNELFYEIAKRL 112
NV + F E+ ++
Sbjct: 130 NVQQCFEELVLKV 142
>Medtr8g093740.3 | RAB GTPase-like protein A5B | HC |
chr8:39223227-39227053 | 20130731
Length = 175
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 55/133 (41%), Gaps = 43/133 (32%)
Query: 23 STIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMYYRGAASAIVVYD--------- 73
ST G F + +++ +K IWDTAGQER+ L YYRGA I+VYD
Sbjct: 10 STTGVDFKVKYVTIEGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTN 69
Query: 74 ----------------------------------ITSMDGEEYAKENGMTFFETSAKTAQ 99
+T +G ++A+E G F E SAKT
Sbjct: 70 LSEIWAKEIDLYSTNQDCMKMLVGNKVDKEGDRVVTKKEGIDFAREYGCLFIECSAKTRV 129
Query: 100 NVNELFYEIAKRL 112
NV + F E+ ++
Sbjct: 130 NVQQCFEELVLKV 142
>Medtr1686s0010.1 | Ras family small GTPase | HC |
scaffold1686:870-1222 | 20130731
Length = 92
Score = 59.7 bits (143), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 40/66 (60%)
Query: 12 FVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMYYRGAASAIVV 71
+V +F + + TIGA FFT+ L + + V IWDTAG+ER+ +YRG+ +++
Sbjct: 1 YVHKKFEKEYKGTIGADFFTKELKIGDQPVTLQIWDTAGRERFQSRGVSFYRGSDCCVLI 60
Query: 72 YDITSM 77
YDI M
Sbjct: 61 YDINHM 66
>Medtr3g107717.1 | GTP-binding nuclear Ran-like protein | HC |
chr3:49697497-49694259 | 20130731
Length = 221
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
GTGKT+ V R + G+F + E TIG N ++F WDTAGQE++ L Y
Sbjct: 23 GTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGY 82
Query: 62 YRGAASAIVVYDITS 76
Y AI+++D+T+
Sbjct: 83 YIHGQCAIIMFDVTA 97
>Medtr3g107713.1 | GTP-binding nuclear Ran-like protein | HC |
chr3:49692352-49689734 | 20130731
Length = 221
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
GTGKT+ V R + G+F + E TIG N ++F WDTAGQE++ L Y
Sbjct: 23 GTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGY 82
Query: 62 YRGAASAIVVYDITS 76
Y AI+++D+T+
Sbjct: 83 YIHGQCAIIMFDVTA 97
>Medtr3g107707.1 | GTP-binding nuclear Ran-like protein | HC |
chr3:49686750-49683969 | 20130731
Length = 221
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
GTGKT+ V R + G+F + E TIG N ++F WDTAGQE++ L Y
Sbjct: 23 GTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGY 82
Query: 62 YRGAASAIVVYDITS 76
Y AI+++D+T+
Sbjct: 83 YIHGQCAIIMFDVTA 97
>Medtr2g005500.2 | RAB GTPase-like protein B1C | HC |
chr2:184631-185974 | 20130731
Length = 163
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 64/143 (44%), Gaps = 10/143 (6%)
Query: 4 GKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERY--HCLAPMY 61
GK+ L+LRF + + STIG F + + L T K IW +RY H ++ +
Sbjct: 21 GKSCLLLRFADDSYDDTYISTIGVDFKIRTVELEGKTAKLQIW-LHEIDRYANHSVSKLL 79
Query: 62 YRGAASAIVVYDITSMDGEEYAKENGMTFFETSAKTAQNVNELFYEIAKRLAKANPSRQT 121
+ + + +A E G+ F ETSAK + NV + F +A + S+ T
Sbjct: 80 VGNKCDLTDNKLVHTHTAKAFADELGIPFLETSAKDSINVEQAFLTMAAEIKNKMGSQPT 139
Query: 122 G-------IKLQSRPQERRRMFC 137
G ++++ +P ++ C
Sbjct: 140 GSKSAAESVQMKGQPIQQNTNCC 162
>Medtr8g075240.1 | Rho-like GTP-binding protein | HC |
chr8:31801964-31806400 | 20130731
Length = 197
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
GKT L++ + F T+ F V+ +N +TV +WDTAGQE Y+ L P+
Sbjct: 16 AVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSTVNLGLWDTAGQEDYNRLRPLS 74
Query: 62 YRGAASAIVVYDITS 76
YRGA I+ + + S
Sbjct: 75 YRGADVFILAFSLIS 89
>Medtr5g022600.3 | Rho-like GTP-binding protein | HC |
chr5:8913558-8916499 | 20130731
Length = 197
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
GKT L++ + F T+ F V+ +N + V +WDTAGQE Y+ L P+
Sbjct: 16 AVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSIVNLGLWDTAGQEDYNRLRPLS 74
Query: 62 YRGAASAIVVYDITS 76
YRGA I+ + + S
Sbjct: 75 YRGADVFILAFSLIS 89
>Medtr5g022600.2 | Rho-like GTP-binding protein | HC |
chr5:8913564-8916486 | 20130731
Length = 197
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
GKT L++ + F T+ F V+ +N + V +WDTAGQE Y+ L P+
Sbjct: 16 AVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSIVNLGLWDTAGQEDYNRLRPLS 74
Query: 62 YRGAASAIVVYDITS 76
YRGA I+ + + S
Sbjct: 75 YRGADVFILAFSLIS 89
>Medtr5g022600.1 | Rho-like GTP-binding protein | HC |
chr5:8913558-8916499 | 20130731
Length = 197
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
GKT L++ + F T+ F V+ +N + V +WDTAGQE Y+ L P+
Sbjct: 16 AVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSIVNLGLWDTAGQEDYNRLRPLS 74
Query: 62 YRGAASAIVVYDITS 76
YRGA I+ + + S
Sbjct: 75 YRGADVFILAFSLIS 89
>Medtr4g113620.1 | GTP-binding nuclear protein Ran1 | HC |
chr4:46721599-46724489 | 20130731
Length = 212
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 9/75 (12%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
GTGKT+ V R + G+F E F+T N ++F+ WDTAGQ ++ L Y
Sbjct: 23 GTGKTTFVKRHLTGEF----EREKYEHFYT-----NCGKIRFNCWDTAGQGKFGGLRDAY 73
Query: 62 YRGAASAIVVYDITS 76
Y AI+++D+T+
Sbjct: 74 YTQGQCAIIMFDVTA 88
>Medtr4g073250.1 | Rho-like GTP-binding protein | HC |
chr4:27704429-27701177 | 20130731
Length = 197
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 3 TGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMYY 62
GKT L++ + F T+ F V+ ++ +T+ +WDTAGQE Y+ L P+ Y
Sbjct: 17 VGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTINLGLWDTAGQEDYNRLRPLSY 75
Query: 63 RGAASAIVVYDITS 76
RGA ++ + + S
Sbjct: 76 RGADVFLLAFSLIS 89
>Medtr4g088055.1 | Rho-like GTP-binding protein | HC |
chr4:34676171-34677808 | 20130731
Length = 196
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
GKT +++ + F T+ F V+ ++ +TV +WDTAGQE Y+ L P+
Sbjct: 16 AVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQEDYNRLRPLS 74
Query: 62 YRGAASAIVVYDITS 76
YRGA ++ + + S
Sbjct: 75 YRGADVFLLCFSLIS 89
>Medtr2g090875.1 | Rho-like GTP-binding protein | HC |
chr2:39006073-39004055 | 20130731
Length = 196
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
GKT +++ + F T+ F V+ ++ +TV +WDTAGQE Y+ L P+
Sbjct: 16 AVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQEDYNRLRPLS 74
Query: 62 YRGAASAIVVYDITS 76
YRGA ++ + + S
Sbjct: 75 YRGADVFLLAFSLLS 89