Miyakogusa Predicted Gene
- Lj4g3v3081710.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v3081710.1 Non Characterized Hit- tr|F6HYF5|F6HYF5_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,37.5,0.00000000001,seg,NULL; Ist1,Domain of unknown function
DUF292, eukaryotic; UNCHARACTERIZED,NULL; UNCHARACTERIZED
,NODE_40188_length_2676_cov_17.268311.path2.1
(718 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr8g103540.1 | regulator of Vps4 activity in the MVB pathway ... 701 0.0
Medtr6g086635.1 | regulator of Vps4 activity in the MVB pathway ... 634 0.0
Medtr2g102030.1 | regulator of Vps4 activity in the MVB pathway ... 178 2e-44
Medtr2g102030.2 | regulator of Vps4 activity in the MVB pathway ... 178 2e-44
Medtr4g012540.1 | regulator of Vps4 activity in the MVB pathway ... 161 2e-39
Medtr8g074540.1 | regulator of Vps4 activity in the MVB pathway ... 122 9e-28
Medtr6g038150.1 | regulator of Vps4 activity in the MVB pathway ... 116 1e-25
Medtr6g091690.1 | regulator of Vps4 activity in the MVB pathway ... 114 3e-25
Medtr4g038310.1 | regulator of Vps4 activity in the MVB pathway ... 103 8e-22
Medtr1g110690.1 | regulator of Vps4 activity in the MVB pathway ... 100 5e-21
Medtr2g090230.1 | regulator of Vps4 activity in the MVB pathway ... 98 2e-20
Medtr7g407010.1 | regulator of Vps4 activity in the MVB pathway ... 88 3e-17
Medtr8g074540.2 | regulator of Vps4 activity in the MVB pathway ... 85 2e-16
Medtr1g111210.1 | regulator of Vps4 activity in the MVB pathway ... 78 3e-14
Medtr4g081350.1 | regulator of Vps4 activity in the MVB pathway ... 77 8e-14
Medtr4g081350.2 | regulator of Vps4 activity in the MVB pathway ... 77 8e-14
Medtr6g091690.2 | regulator of Vps4 activity in the MVB pathway ... 74 4e-13
Medtr2g090230.3 | regulator of Vps4 activity in the MVB pathway ... 72 3e-12
Medtr7g098540.1 | regulator of Vps4 activity in the MVB pathway ... 58 3e-08
>Medtr8g103540.1 | regulator of Vps4 activity in the MVB pathway
protein | HC | chr8:43568770-43572054 | 20130731
Length = 641
Score = 701 bits (1810), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/733 (54%), Positives = 463/733 (63%), Gaps = 107/733 (14%)
Query: 1 MLDSVLGKGFAAKCKSLIKLTKSRIDVIRRKRKATEKFLKKDIADLLLDGLDTNAYGRAE 60
MLD +LGK F+AKCK LIK+TK+R++VI+RKRKATEKFLKKDIADLL GLD NAYGRAE
Sbjct: 1 MLDGLLGKTFSAKCKPLIKMTKNRVEVIKRKRKATEKFLKKDIADLLHSGLDINAYGRAE 60
Query: 61 GLVVELTLSSCYGFVEKACELVLKHLSVMQKLSGCPEECRVAVSSLMFAAARFSDLPELR 120
GL+VEL LSSCYGFVEK+CELVLKHLSVMQKLSGCPEECRVAVSSLMFAAARFSDLPELR
Sbjct: 61 GLLVELILSSCYGFVEKSCELVLKHLSVMQKLSGCPEECRVAVSSLMFAAARFSDLPELR 120
Query: 121 DLRKIFQERYGNSFECHVNQEFAANLNSNSSTLEKKICLMEGIAAEFSINWDSNAFKLRM 180
DLR+IFQERYG+S EC VNQEFAANLNS SSTLEKK+CLM+ IA+EFSINWDS AF++RM
Sbjct: 121 DLRQIFQERYGSSVECFVNQEFAANLNSKSSTLEKKVCLMQEIASEFSINWDSKAFEIRM 180
Query: 181 LKSSSFAQDHTQKGVNNDVLLEKSPDHANVGYK-------FQNGKEAII---LNKDDHNL 230
+ S+FAQ + NN +KS + K +NGKEA+I LN+D H L
Sbjct: 181 SRPSAFAQGQSASICNNLFDYDKSSVSKDFCQKDAKNDVILENGKEAVILKDLNRDYHEL 240
Query: 231 QSKPMIPGNVFKPLNGFELLRKRDGHDNPLTGRQEVTAKKSDGAHWKEGSMLKPLNGFEL 290
Q K PGN FKPLNG E+L K+DGHDN LTG+QEVT KSD ++WKEG+MLKP+
Sbjct: 241 QYKSTFPGNGFKPLNGREVLGKKDGHDNSLTGKQEVTTTKSDRSYWKEGNMLKPI----- 295
Query: 291 LRKRDGHDNPLTGRQEVTAKKSDGAHWKEGSMLKPTGRSSQEKTVENLEVGSKMHDS--- 347
GRS Q+KT+E E G K+HDS
Sbjct: 296 ------------------------------------GRSFQDKTLEKFEDGFKLHDSLGN 319
Query: 348 -CLLRETLDSTTTRKSPSHTCFRSNVNESFAVNHVGLPDTDNSERKVQKEKMPTLKPCYS 406
R++ D+ T+ + S FRSNV E A G PDTD SERKVQ ++ P LKPC+S
Sbjct: 320 MTPPRKSQDTATSTRIGSR--FRSNVKEPCA----GPPDTDKSERKVQHDETPMLKPCFS 373
Query: 407 NGIPSDIDKSESIVQKDKTPTPKPCYGNGIPPPYFKSNSKQQSSNCIPPPYVKSNSKQQS 466
N IP PPYVK SK Q+
Sbjct: 374 NVIP--------------------------------------------PPYVKHVSKNQN 389
Query: 467 STRGTDVVVSSHIDSGAISTYYSANEKPDPTSVSERIHIGFDKSYQDEQASKHENLSKQG 526
T G + VVS H DS T S +E D S+SER IG +KS D QAS+HE LSK
Sbjct: 390 RTCGVN-VVSPHTDSDGFFTCPSVHENSDAASMSERTQIGLNKSDLDWQASRHERLSKHS 448
Query: 527 HEKEYSICEDAKEVRLAXXXXXXXXXXXXXXXHYDAANEDTAIVXXXXXXXXXXXXXXXG 586
+KE ED+KE+ HYDA N DT +V G
Sbjct: 449 PKKELYFREDSKEIPKLKAKSTRRKHSRSRTSHYDAPNVDTELVRKARSRSRRRSESRRG 508
Query: 587 FQMLFDDERHQNA-EEKIIDKLLSHYSRKPSILVPEKVRKKPNSDHAHLMDNSTKELLQN 645
+ LF DE+HQNA EE++IDKLL HYS+KPSIL PE VRKK NS H H MDNST+ELLQN
Sbjct: 509 LRNLFVDEQHQNAEEERVIDKLLIHYSKKPSILKPEIVRKKSNSHHEHKMDNSTRELLQN 568
Query: 646 RISDGSDKPPEMATLALRSVSLPREQPRAVEVKKEFTRAASFQPDTSKDAQHVHPKLPDY 705
DGSD+ PE+ TL LRSVSLPREQ R +E KK+F RAASFQPD S + +HVHPKLPD
Sbjct: 569 GDGDGSDETPEIVTLPLRSVSLPREQTRVIEAKKDFVRAASFQPDRSYETRHVHPKLPDC 628
Query: 706 DDLAARFAALRGK 718
DDLA R AAL+G+
Sbjct: 629 DDLATRLAALKGR 641
>Medtr6g086635.1 | regulator of Vps4 activity in the MVB pathway
protein | HC | chr6:32610917-32605057 | 20130731
Length = 633
Score = 634 bits (1635), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/734 (49%), Positives = 454/734 (61%), Gaps = 119/734 (16%)
Query: 1 MLDSVLGKGFAAKCKSLIKLTKSRIDVIRRKRKATEKFLKKDIADLLLDGLDTNAYGRAE 60
MLD +LG+GFAAKCKSLIKLTK+RIDVIRRKRKATEKFLKKDI DLL++GLD NAYGRAE
Sbjct: 1 MLDGLLGRGFAAKCKSLIKLTKNRIDVIRRKRKATEKFLKKDIGDLLVNGLDVNAYGRAE 60
Query: 61 GLVVELTLSSCYGFVEKACELVLKHLSVMQKLSGCPEECRVAVSSLMFAAARFSDLPELR 120
GL+ ELTL+SCY FVE C+ VLKHLSV+QKLSGCPEECR A++ L+ AAARFSDLPELR
Sbjct: 61 GLIAELTLTSCYDFVEWTCDFVLKHLSVLQKLSGCPEECREAIACLIIAAARFSDLPELR 120
Query: 121 DLRKIFQERYGNSFECHVNQEFAANLNSNSSTLEKKICLMEGIAAEFSINWDSNAFKLRM 180
DLR+IFQERYGN +C+VNQEFAANLN S TLE+K+ LM+ I++EF I WDS AF+LRM
Sbjct: 121 DLRQIFQERYGNCLDCYVNQEFAANLNPKSFTLEQKVRLMQEISSEFQIKWDSKAFELRM 180
Query: 181 LKSSSFAQDHTQKGVNN---------DVLLEKSPDHANVGYKFQNGKEAIILNKDDHNLQ 231
KSS+ + T K ++ ++LL+KSPD +N G+K++NGKEA + D++ L
Sbjct: 181 SKSSAKGHN-THKSDHSVGKPLQGKAEILLDKSPDQSNGGHKYRNGKEAAVSKADENYLH 239
Query: 232 SKPMIPGNVFKPLNGF-ELLRKRDGHDNPLTGRQEVTAKKSDGAHWKEGSMLKPLNGFEL 290
K +P FKP+ + E+ RD H NPL G++E+T++K G +WKEGSMLKP
Sbjct: 240 PKSKLPEKGFKPITRYDEVNLPRDSHGNPLPGKEELTSQK--GVYWKEGSMLKP------ 291
Query: 291 LRKRDGHDNPLTGRQEVTAKKSDGAHWKEGSMLKPTGRSSQEKTVENLEVGSKMHD---- 346
P G SSQ+K V + GS +HD
Sbjct: 292 ----------------------------------PIGCSSQDKRVHQFDDGSDLHDRKGN 317
Query: 347 SCLLRETLDSTTTRKSPSHTCF--RSNVNESFAVNHVGLPDTDNSERKVQKEKMPTLKPC 404
+ +RET D+ T RKSPSH F +SN+NE FAVNH GLPD DNS+RKVQK++ P +KP
Sbjct: 318 TTRVRETPDTATARKSPSHAGFHSKSNLNEPFAVNHGGLPDLDNSQRKVQKDETPKVKPY 377
Query: 405 YSNGIPSDIDKSESIVQKDKTPTPKPCYGNGIPPPYFKSNSKQQSSNCIPPPYVKSNSKQ 464
YSNGIP PPYVK NSK
Sbjct: 378 YSNGIP--------------------------------------------PPYVKPNSKL 393
Query: 465 QSSTRGTDVVVSSHIDSGAISTYYSANEKPDPTSVSERIHIGFDKSYQDEQASKHENLSK 524
++ST+ T+ + SSHID+ I T S ++K D S +ERI D S QD QAS+H SK
Sbjct: 394 KTSTQRTE-LASSHIDNDGIPTNPSIHQKSDAASTTERIRSSLDNSEQDVQASRHAQPSK 452
Query: 525 QGHEKEYSICEDAKEVRLAXXXXXXXXXXXXXXXHYDAANEDTAIVXXXXXXXXXXXXXX 584
Q +EKE ++ +A+E + H DA ED
Sbjct: 453 QDYEKESAVLGEAREFPILKQKSTRRRHSKSRSTHNDANKEDAEAA--RKSKSKRRDESK 510
Query: 585 XGFQMLFDDERH-QNAEEKIIDKLLSHYSRKPSILVPEKVRKKPNSDHAHLMDNSTKELL 643
G Q+LFDDE+H ++ EE++ID+LL HYS+KP+I +PEK R++ S HAH MD
Sbjct: 511 RGLQILFDDEKHKKDEEERVIDRLLIHYSKKPTISMPEKARRRSKSRHAHQMD------- 563
Query: 644 QNRISDGSDKPPEMATLALRSVSLPREQPRAVEVKKEFTRAASFQPDTSKDAQHVHPKLP 703
DG DK P++ A RSVSLP EQ + +E+ K FTRAASFQPD +K+A+HVHP LP
Sbjct: 564 -----DGPDKTPDIIPRAPRSVSLPHEQSQEMEINKVFTRAASFQPDRAKEARHVHPNLP 618
Query: 704 DYDDLAARFAALRG 717
DYDDLAAR AALRG
Sbjct: 619 DYDDLAARLAALRG 632
>Medtr2g102030.1 | regulator of Vps4 activity in the MVB pathway
protein | HC | chr2:43906744-43909269 | 20130731
Length = 432
Score = 178 bits (451), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 82/180 (45%), Positives = 118/180 (65%)
Query: 1 MLDSVLGKGFAAKCKSLIKLTKSRIDVIRRKRKATEKFLKKDIADLLLDGLDTNAYGRAE 60
M +L KCK+ +KL K+R++ IR+KR A +KFLKKD+ DLL + L+ NAYGRAE
Sbjct: 1 MFQGLLKPKSYTKCKNCLKLIKTRLETIRKKRNAVQKFLKKDLVDLLKNSLEYNAYGRAE 60
Query: 61 GLVVELTLSSCYGFVEKACELVLKHLSVMQKLSGCPEECRVAVSSLMFAAARFSDLPELR 120
GL+VE +S+CY + K + H+ K CP+EC+ A+ SL++AAARFSDLPELR
Sbjct: 61 GLLVEQNMSACYELIAKFAGCISSHVREFSKQDNCPDECKEAIPSLIYAAARFSDLPELR 120
Query: 121 DLRKIFQERYGNSFECHVNQEFAANLNSNSSTLEKKICLMEGIAAEFSINWDSNAFKLRM 180
DLR +FQ+++G+S + + ++EF L T E KI L+ +A E SI WD A + ++
Sbjct: 121 DLRTLFQQKFGDSLDPYTSKEFIERLRQTPPTKEMKIQLLHELAQEHSIEWDRKALEQKL 180
>Medtr2g102030.2 | regulator of Vps4 activity in the MVB pathway
protein | HC | chr2:43906458-43909303 | 20130731
Length = 432
Score = 178 bits (451), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 82/180 (45%), Positives = 118/180 (65%)
Query: 1 MLDSVLGKGFAAKCKSLIKLTKSRIDVIRRKRKATEKFLKKDIADLLLDGLDTNAYGRAE 60
M +L KCK+ +KL K+R++ IR+KR A +KFLKKD+ DLL + L+ NAYGRAE
Sbjct: 1 MFQGLLKPKSYTKCKNCLKLIKTRLETIRKKRNAVQKFLKKDLVDLLKNSLEYNAYGRAE 60
Query: 61 GLVVELTLSSCYGFVEKACELVLKHLSVMQKLSGCPEECRVAVSSLMFAAARFSDLPELR 120
GL+VE +S+CY + K + H+ K CP+EC+ A+ SL++AAARFSDLPELR
Sbjct: 61 GLLVEQNMSACYELIAKFAGCISSHVREFSKQDNCPDECKEAIPSLIYAAARFSDLPELR 120
Query: 121 DLRKIFQERYGNSFECHVNQEFAANLNSNSSTLEKKICLMEGIAAEFSINWDSNAFKLRM 180
DLR +FQ+++G+S + + ++EF L T E KI L+ +A E SI WD A + ++
Sbjct: 121 DLRTLFQQKFGDSLDPYTSKEFIERLRQTPPTKEMKIQLLHELAQEHSIEWDRKALEQKL 180
>Medtr4g012540.1 | regulator of Vps4 activity in the MVB pathway
protein | HC | chr4:3324526-3322547 | 20130731
Length = 320
Score = 161 bits (407), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 84/165 (50%), Positives = 108/165 (65%), Gaps = 2/165 (1%)
Query: 28 IRRKRKATEKFLKKDIADLLLDGLDTNAYGRAEGLVVELTLSSCYGFVEKACELVLKHLS 87
+ +KR+A +KF K DIA+LL G D +AY R EGL+ E + SCY F+EK + HL
Sbjct: 1 MEKKRRAIQKFTKNDIAELLRSGHDYDAYKRTEGLLFEEKILSCYEFIEKFIGCISDHLE 60
Query: 88 VMQKLSGCPEECRVAVSSLMFAAARFSDLPELRDLRKIFQERYGNSFECHVNQEFAANLN 147
+ K S CPEEC+ A+ SLM+AAAR SDLPELRDLR +F E+YGNS E ++N+EF L
Sbjct: 61 ELIKQSECPEECKEAIPSLMYAAARISDLPELRDLRTLFTEKYGNSLEPYINKEFVEKLR 120
Query: 148 SNSSTLEKKICLMEGIAAEFSINWDSNAFKLRMLKSSSFAQDHTQ 192
+S T E KI L+ IA EFSI WD A K +ML + + TQ
Sbjct: 121 -HSPTREMKIRLLYDIAQEFSIEWDGKALK-KMLYTHPSLYEGTQ 163
>Medtr8g074540.1 | regulator of Vps4 activity in the MVB pathway
protein | HC | chr8:31514186-31518057 | 20130731
Length = 426
Score = 122 bits (307), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 112/189 (59%), Gaps = 10/189 (5%)
Query: 4 SVLGKGF-AAKCKSLIKLTKSRIDVIRRKRKATEKFLKKDIADLLLDGLDTNAYGRAEGL 62
++LG GF ++KCK+ K+ +RI ++R KR+ + +++DIA LL G D A R E +
Sbjct: 20 ALLGLGFNSSKCKTASKMAVARIKLLRNKREVVVRQMRRDIAMLLQSGQDATARIRVEHV 79
Query: 63 VVELTLSSCYGFVEKACELVLKHLSVMQKLSGCPEECRVAVSSLMFAAARFSDLPELRDL 122
+ E + + F+E CEL++ LS++ K CP + + ++SL+FAA R S++PEL L
Sbjct: 80 MREQNVLAANEFIELFCELIVARLSIIAKQRECPADLKEGIASLIFAAPRCSEIPELVSL 139
Query: 123 RKIFQERYGNSF---------ECHVNQEFAANLNSNSSTLEKKICLMEGIAAEFSINWDS 173
+KIF+++YG F C VN++ L+ + E K+ +++ IA E+ I+WD+
Sbjct: 140 KKIFEKKYGRDFVSAATDLRPSCGVNRQLIDKLSVRTPPGEVKLKVLKEIAKEYQIDWDT 199
Query: 174 NAFKLRMLK 182
+ +LK
Sbjct: 200 AESEKELLK 208
>Medtr6g038150.1 | regulator of Vps4 activity in the MVB pathway
protein | HC | chr6:13631459-13638217 | 20130731
Length = 585
Score = 116 bits (290), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 107/192 (55%), Gaps = 10/192 (5%)
Query: 1 MLDSVLGKGF-AAKCKSLIKLTKSRIDVIRRKRKATEKFLKKDIADLLLDGLDTNAYGRA 59
ML+S +GF A+KCK+L+KL+ RI ++R +R+ K ++++IA LL G + A R
Sbjct: 3 MLNSFFAQGFKASKCKTLLKLSIPRIKLLRNRRENQLKNMRREIAKLLETGQEATARIRV 62
Query: 60 EGLVVELTLSSCYGFVEKACELVLKHLSVMQKLSGCPEECRVAVSSLMFAAARFSDLPEL 119
E ++ E + + +E CELV L +++ P + + A+SS+ FAA R +DLPEL
Sbjct: 63 EHIIREENMMAAQEILELFCELVSVRLPIIESQREIPLDLKEAISSICFAAPRCADLPEL 122
Query: 120 RDLRKIFQERYGNSF---------ECHVNQEFAANLNSNSSTLEKKICLMEGIAAEFSIN 170
+++ F +YG F +C VN++ L+ + + EKK+ L++ IA E ++
Sbjct: 123 IQVQQQFATKYGKEFISAATELRPDCGVNRQIIELLSVRAPSPEKKLTLLKDIAVEHELD 182
Query: 171 WDSNAFKLRMLK 182
WD + K
Sbjct: 183 WDPATAETEFFK 194
>Medtr6g091690.1 | regulator of Vps4 activity in the MVB pathway
protein | HC | chr6:34539005-34533305 | 20130731
Length = 1037
Score = 114 bits (286), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 100/182 (54%), Gaps = 10/182 (5%)
Query: 5 VLGKGF-AAKCKSLIKLTKSRIDVIRRKRKATEKFLKKDIADLLLDGLDTNAYGRAEGLV 63
+L + F AKCK+ +KL SRI ++R KR+ LK+++A LL +G D A R E +V
Sbjct: 1 MLHRSFKPAKCKTALKLAVSRIKLLRNKRQTQINLLKRELAKLLENGQDQTARIRVEHVV 60
Query: 64 VELTLSSCYGFVEKACELVLKHLSVMQKLSGCPEECRVAVSSLMFAAARFSDLPELRDLR 123
E + Y VE CEL+ L +++ CP + + A+++++FA R SD+PEL D++
Sbjct: 61 REEKTMAAYELVEIYCELIAARLPMIEAQKNCPIDLKEAIATVIFATPRCSDIPELADVK 120
Query: 124 KIFQERYGNSF---------ECHVNQEFAANLNSNSSTLEKKICLMEGIAAEFSINWDSN 174
K +YG F +C VN+ L++ + KI ++ IA E +I+W+
Sbjct: 121 KHMTSKYGKEFTSAALELRPDCGVNRLLVEKLSAKAPDGPTKIKILTAIAEEHNIDWEPK 180
Query: 175 AF 176
+F
Sbjct: 181 SF 182
>Medtr4g038310.1 | regulator of Vps4 activity in the MVB pathway
protein | HC | chr4:16293650-16290420 | 20130731
Length = 472
Score = 103 bits (256), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 79/134 (58%)
Query: 1 MLDSVLGKGFAAKCKSLIKLTKSRIDVIRRKRKATEKFLKKDIADLLLDGLDTNAYGRAE 60
M G A+KCK IK + R+ ++ KRK L+ D+A+L+L+G + A R E
Sbjct: 1 MFGIFFGWTKASKCKKAIKTARCRLIHLKNKRKTIALHLRNDLAELILNGYEEVAINRVE 60
Query: 61 GLVVELTLSSCYGFVEKACELVLKHLSVMQKLSGCPEECRVAVSSLMFAAARFSDLPELR 120
L+ + +L + Y +++ E +L LS ++K CP + AVSS++FA+ARF D PEL
Sbjct: 61 VLIQDESLVAAYEMLDQFFEFILHQLSYIRKHKDCPTDINEAVSSIIFASARFGDFPELY 120
Query: 121 DLRKIFQERYGNSF 134
+RK+F +RYG F
Sbjct: 121 PIRKLFAQRYGQDF 134
>Medtr1g110690.1 | regulator of Vps4 activity in the MVB pathway
protein | HC | chr1:49937141-49942373 | 20130731
Length = 326
Score = 100 bits (249), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 102/184 (55%), Gaps = 10/184 (5%)
Query: 1 MLDSVLGKG-FAAKCKSLIKLTKSRIDVIRRKRKATEKFLKKDIADLLLDGLDTNAYGRA 59
+L+ + +G F+ +CK+ + L SR+ +++ KR K ++K+I+ L G + A R
Sbjct: 3 LLNQLFSRGVFSTRCKTCLNLAISRMKLLQNKRDVQLKQMRKEISQFLQAGQEPIARIRV 62
Query: 60 EGLVVELTLSSCYGFVEKACELVLKHLSVMQKLSGCPEECRVAVSSLMFAAARFSDLPEL 119
E ++ E + + Y +E CE VL + +++ CP E R A++S++FAA R D+P+L
Sbjct: 63 EHIIREQNIWAAYEILELFCEFVLARVPIIESQKECPSELREAIASIIFAAPRCPDIPDL 122
Query: 120 RDLRKIFQERYGNSF---------ECHVNQEFAANLNSNSSTLEKKICLMEGIAAEFSIN 170
++ +F +YG F + VN+ L+ ++ + E K+ ++ IA E+++
Sbjct: 123 LHIKNLFTTKYGKEFVTAISELRPDSGVNRTIIEKLSVSAPSGEIKLKVLTDIAEEYNLA 182
Query: 171 WDSN 174
WDS+
Sbjct: 183 WDSS 186
>Medtr2g090230.1 | regulator of Vps4 activity in the MVB pathway
protein | LC | chr2:38321037-38323955 | 20130731
Length = 587
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 80/133 (60%)
Query: 14 CKSLIKLTKSRIDVIRRKRKATEKFLKKDIADLLLDGLDTNAYGRAEGLVVELTLSSCYG 73
CK IK + RI +++ K+ A + L+KD+ +L+ G + A R E LV + +L++ Y
Sbjct: 3 CKKAIKRARYRIKLLKNKKDAIVRQLRKDLVELIQGGYEEAALNRVEQLVKDESLAAAYE 62
Query: 74 FVEKACELVLKHLSVMQKLSGCPEECRVAVSSLMFAAARFSDLPELRDLRKIFQERYGNS 133
+++ CE +L LS +++ CP + + A+SSL+FA+AR D+PEL +R +F +RYG
Sbjct: 63 LLDQFCEFILTQLSYIRRHKDCPNDIKEAISSLIFASARCGDIPELFVIRILFGKRYGEQ 122
Query: 134 FECHVNQEFAANL 146
F + F NL
Sbjct: 123 FATTAVELFPGNL 135
>Medtr7g407010.1 | regulator of Vps4 activity in the MVB pathway
protein | HC | chr7:1041779-1039059 | 20130731
Length = 440
Score = 88.2 bits (217), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 86/174 (49%), Gaps = 9/174 (5%)
Query: 5 VLGKGFAAKCKSLIKLTKSRIDVIRRKRKATEKFLKKDIADLLLDGLDTNAYGRAEGLVV 64
++GK F +K K+L L SRI +++ RKA + + D++ LL A R E +V
Sbjct: 3 LIGKSFTSKLKNLTSLAISRIAILKNHRKARDSYAYFDVSQLLKLDYHDQALVRVEHWIV 62
Query: 65 ELTLSSCYGFVEKACELVLKHLSVMQKLSGCPEECRVAVSSLMFAAARFSDLPELRDLRK 124
E + + +E C ++ + V++ CP E + A SL+FA++R + PEL +++
Sbjct: 63 EQNMLDAFDMIEVYCNVLKERAQVLENNKECPFELKEATCSLIFASSRCGEFPELHKIQE 122
Query: 125 IFQERYGNSFECH---------VNQEFAANLNSNSSTLEKKICLMEGIAAEFSI 169
I ++G F H VN + L+S T+E K+ + IA + +
Sbjct: 123 ILTSKFGREFADHAIELHKNNEVNSKMIQKLSSKHPTMEIKMNALMKIATDIGV 176
>Medtr8g074540.2 | regulator of Vps4 activity in the MVB pathway
protein | HC | chr8:31515923-31518057 | 20130731
Length = 352
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 76/133 (57%), Gaps = 9/133 (6%)
Query: 59 AEGLVVELTLSSCYGFVEKACELVLKHLSVMQKLSGCPEECRVAVSSLMFAAARFSDLPE 118
E ++ E + + F+E CEL++ LS++ K CP + + ++SL+FAA R S++PE
Sbjct: 2 VEHVMREQNVLAANEFIELFCELIVARLSIIAKQRECPADLKEGIASLIFAAPRCSEIPE 61
Query: 119 LRDLRKIFQERYGNSF---------ECHVNQEFAANLNSNSSTLEKKICLMEGIAAEFSI 169
L L+KIF+++YG F C VN++ L+ + E K+ +++ IA E+ I
Sbjct: 62 LVSLKKIFEKKYGRDFVSAATDLRPSCGVNRQLIDKLSVRTPPGEVKLKVLKEIAKEYQI 121
Query: 170 NWDSNAFKLRMLK 182
+WD+ + +LK
Sbjct: 122 DWDTAESEKELLK 134
>Medtr1g111210.1 | regulator of Vps4 activity in the MVB pathway
protein | HC | chr1:50228743-50230793 | 20130731
Length = 373
Score = 78.2 bits (191), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 91/181 (50%), Gaps = 11/181 (6%)
Query: 2 LDSVLGKGFAA-KCKSLIKLTKSRIDVIRRKRKATEKFLKKDIADLL-LDGLDTNAYGRA 59
LD++LG+ F A K K I L SR+ V++ +R + + D+ LL L A R
Sbjct: 5 LDALLGRNFKADKFKPTINLAISRLAVLKNQRNVRLRQSRSDVLQLLQLPDNHQRALLRV 64
Query: 60 EGLVVELTLSSCYGFVEKACELVLKHLSVMQKLSGCPEECRVAVSSLMFAAARFSDLPEL 119
E ++ E + Y +E L+++ + ++ + CP+E A S ++F A+R D PE+
Sbjct: 65 EYVIKEQNMLDVYDEIEGYFNLLVERIHLIAQQRECPDELEEAASGILFTASRCGDFPEI 124
Query: 120 RDLRKIFQERYGNSF---------ECHVNQEFAANLNSNSSTLEKKICLMEGIAAEFSIN 170
+++R I R+G F C V+ + L++ +LE ++ ++ IA+E +I
Sbjct: 125 QEIRAILTSRFGKEFAARAIELRNNCRVHPKIITKLSTRMPSLESRMKVLREIASENNIT 184
Query: 171 W 171
Sbjct: 185 L 185
>Medtr4g081350.1 | regulator of Vps4 activity in the MVB pathway
protein | HC | chr4:31532897-31536065 | 20130731
Length = 381
Score = 76.6 bits (187), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 85/173 (49%), Gaps = 12/173 (6%)
Query: 12 AKCKSLIKLTKSRIDVIRRKRKATEKFLKKDIADLLLDGLDTNAYGRAEGLVVELTLSSC 71
KCK+ +++ +RI +I KR K L+++I LL A R + +E +
Sbjct: 9 GKCKNALRMAAARIKLINHKRGLQVKQLEREIIYLLESCQSHTATIRVKAFEMEQKKMAA 68
Query: 72 YGFVEKACELVLKHLSVMQKLSGCPEECRVAVSSLMFAAARFSDLPELRDLRKIFQERYG 131
Y + CEL+ + +++ CP + + A+SS+++A+ +++PEL D+R F +YG
Sbjct: 69 YDTIAIYCELIASRMPLIESQKNCPGDLKEAISSVIYASRLCTEIPELLDVRMHFISKYG 128
Query: 132 NSFECHVNQEFAANLNSNSSTLEK----------KICLMEGIAAEFSINWDSN 174
F + EF + +N +EK KI ++ IA E +I W N
Sbjct: 129 KIFVS--DAEFRSEGGANFMLMEKLSSKPPDHPTKIKILVAIAEEHNIKWKPN 179
>Medtr4g081350.2 | regulator of Vps4 activity in the MVB pathway
protein | HC | chr4:31532897-31536132 | 20130731
Length = 380
Score = 76.6 bits (187), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 85/173 (49%), Gaps = 12/173 (6%)
Query: 12 AKCKSLIKLTKSRIDVIRRKRKATEKFLKKDIADLLLDGLDTNAYGRAEGLVVELTLSSC 71
KCK+ +++ +RI +I KR K L+++I LL A R + +E +
Sbjct: 9 GKCKNALRMAAARIKLINHKRGLQVKQLEREIIYLLESCQSHTATIRVKAFEMEQKKMAA 68
Query: 72 YGFVEKACELVLKHLSVMQKLSGCPEECRVAVSSLMFAAARFSDLPELRDLRKIFQERYG 131
Y + CEL+ + +++ CP + + A+SS+++A+ +++PEL D+R F +YG
Sbjct: 69 YDTIAIYCELIASRMPLIESQKNCPGDLKEAISSVIYASRLCTEIPELLDVRMHFISKYG 128
Query: 132 NSFECHVNQEFAANLNSNSSTLEK----------KICLMEGIAAEFSINWDSN 174
F + EF + +N +EK KI ++ IA E +I W N
Sbjct: 129 KIFVS--DAEFRSEGGANFMLMEKLSSKPPDHPTKIKILVAIAEEHNIKWKPN 179
>Medtr6g091690.2 | regulator of Vps4 activity in the MVB pathway
protein | HC | chr6:34539005-34533305 | 20130731
Length = 972
Score = 74.3 bits (181), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 65/124 (52%), Gaps = 9/124 (7%)
Query: 70 SCYGFVEKACELVLKHLSVMQKLSGCPEECRVAVSSLMFAAARFSDLPELRDLRKIFQER 129
+ Y VE CEL+ L +++ CP + + A+++++FA R SD+PEL D++K +
Sbjct: 2 AAYELVEIYCELIAARLPMIEAQKNCPIDLKEAIATVIFATPRCSDIPELADVKKHMTSK 61
Query: 130 YGNSF---------ECHVNQEFAANLNSNSSTLEKKICLMEGIAAEFSINWDSNAFKLRM 180
YG F +C VN+ L++ + KI ++ IA E +I+W+ +F
Sbjct: 62 YGKEFTSAALELRPDCGVNRLLVEKLSAKAPDGPTKIKILTAIAEEHNIDWEPKSFGDND 121
Query: 181 LKSS 184
K+S
Sbjct: 122 TKAS 125
>Medtr2g090230.3 | regulator of Vps4 activity in the MVB pathway
protein | LC | chr2:38321523-38323955 | 20130731
Length = 547
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 55/89 (61%)
Query: 58 RAEGLVVELTLSSCYGFVEKACELVLKHLSVMQKLSGCPEECRVAVSSLMFAAARFSDLP 117
+ E LV + +L++ Y +++ CE +L LS +++ CP + + A+SSL+FA+AR D+P
Sbjct: 7 KVEQLVKDESLAAAYELLDQFCEFILTQLSYIRRHKDCPNDIKEAISSLIFASARCGDIP 66
Query: 118 ELRDLRKIFQERYGNSFECHVNQEFAANL 146
EL +R +F +RYG F + F NL
Sbjct: 67 ELFVIRILFGKRYGEQFATTAVELFPGNL 95
>Medtr7g098540.1 | regulator of Vps4 activity in the MVB pathway
protein | LC | chr7:39446206-39447519 | 20130731
Length = 206
Score = 58.2 bits (139), Expect = 3e-08, Method: Composition-based stats.
Identities = 42/166 (25%), Positives = 78/166 (46%), Gaps = 5/166 (3%)
Query: 12 AKCKSLIKLTKSRIDVIRRKRKATEKFLKKDIADLLLDGLDTNAYGRAEGLVVELTLSSC 71
+ C+ L+K T + + +K ++ +I+ L+ L +A + L+
Sbjct: 19 STCERLLKTTVLDAQALIQAKKKQMDAIRNEISKLVPYPLVYSALPLIRTYFHQKNLTQL 78
Query: 72 YGFVEKACELVLKHLSVMQKLSGCPEECRVAVSSLMFAAARFSDLPELRDLRKIFQERYG 131
+ CE+V +L M+ E + A++SL + A+FS+LP+L+ LR F ++YG
Sbjct: 79 LHIIIYICEVVSCNLLFMEYEREFIPEMKEAIASLCYIGAKFSELPDLQKLRSQFSKKYG 138
Query: 132 NSF-----ECHVNQEFAANLNSNSSTLEKKICLMEGIAAEFSINWD 172
F EC N+E +E++ L++ IA +F I W+
Sbjct: 139 EKFIASLAECGANKEVINLCMVPEPLVEERNKLLKEIATQFHIQWN 184