Miyakogusa Predicted Gene

Lj4g3v3071600.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v3071600.1 Non Characterized Hit- tr|G7L895|G7L895_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,90.77,0,seg,NULL; DUF502,Protein of unknown function DUF502;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL,CUFF.52232.1
         (269 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g103420.1 | like-COV protein | HC | chr8:43512895-43519018...   468   e-132
Medtr8g103400.1 | like-COV protein | HC | chr8:43504245-43510083...   453   e-128
Medtr1g022150.1 | like-COV protein | HC | chr1:6887607-6884866 |...   355   2e-98
Medtr3g095210.1 | like-COV protein | HC | chr3:43501196-43508582...   332   3e-91
Medtr8g103400.2 | like-COV protein | HC | chr8:43504245-43508851...   308   3e-84

>Medtr8g103420.1 | like-COV protein | HC | chr8:43512895-43519018 |
           20130731
          Length = 265

 Score =  468 bits (1205), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 227/257 (88%), Positives = 235/257 (91%)

Query: 13  AVMANRDRDRELLIPVANXXXXXXXXXXXXXXXXMHHAGRETFYKVVRSWASKKFMTGCV 72
            V+ NRDRDRELLIPVAN                MHH+GRETF KVV+SWASKKFMTGCV
Sbjct: 9   TVIGNRDRDRELLIPVANSGDDTDASRPLASSSSMHHSGRETFSKVVQSWASKKFMTGCV 68

Query: 73  ILLPIAITFYITWWFIHFVDGFFSPIYAQLGINIFGLGFITSITFIFLVGVFMSSWLGAS 132
           ILLPIAITFYITWWFIHFVDGFFSPIYAQLGI+IFGLGFITSITFIFLVGVFMSSWLGAS
Sbjct: 69  ILLPIAITFYITWWFIHFVDGFFSPIYAQLGIDIFGLGFITSITFIFLVGVFMSSWLGAS 128

Query: 133 VLGLGEWFIKRMPLVRHIYNASKQISAAISPDQNSQAFKEVAIIRHPRVGEYAFGFITSS 192
           VLGLGEWFIKRMPLVRHIYNASKQISAAISPDQNSQAFKEVAIIRHPRVGEYAFGFITSS
Sbjct: 129 VLGLGEWFIKRMPLVRHIYNASKQISAAISPDQNSQAFKEVAIIRHPRVGEYAFGFITSS 188

Query: 193 VVLQTYSGDEELCCVYVPTNHLYIGDIFLVNVKDVIRPNLSVREGIEIVVSGGMSMPQIL 252
           VVLQ+YSGDEELCCVYVPTNHLYIGDIFLVN KDVIRP LSVREGIEIVVSGGMSMPQIL
Sbjct: 189 VVLQSYSGDEELCCVYVPTNHLYIGDIFLVNTKDVIRPTLSVREGIEIVVSGGMSMPQIL 248

Query: 253 STLDSRVPVEINRPDRR 269
           STL+SRVP +I+RPDRR
Sbjct: 249 STLESRVPAQISRPDRR 265


>Medtr8g103400.1 | like-COV protein | HC | chr8:43504245-43510083 |
           20130731
          Length = 270

 Score =  453 bits (1165), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 222/250 (88%), Positives = 227/250 (90%)

Query: 20  RDRELLIPVANXXXXXXXXXXXXXXXXMHHAGRETFYKVVRSWASKKFMTGCVILLPIAI 79
           RDRELLIPVAN                +HHAGRETF KVV+SWASKKFMTGCVIL PIAI
Sbjct: 21  RDRELLIPVANSGDHSNASKPSSSSSSVHHAGRETFSKVVQSWASKKFMTGCVILFPIAI 80

Query: 80  TFYITWWFIHFVDGFFSPIYAQLGINIFGLGFITSITFIFLVGVFMSSWLGASVLGLGEW 139
           TFYITWWFIHFVDGFFSPIY  LGINIFGLGFITSITFIFL+G+FMSSWLGASVLGLGEW
Sbjct: 81  TFYITWWFIHFVDGFFSPIYVHLGINIFGLGFITSITFIFLIGIFMSSWLGASVLGLGEW 140

Query: 140 FIKRMPLVRHIYNASKQISAAISPDQNSQAFKEVAIIRHPRVGEYAFGFITSSVVLQTYS 199
           FIKRMPLVRHIYNASKQISAAISPDQNSQAFKEVAIIRHPRVGEYA GFITSSVVLQTYS
Sbjct: 141 FIKRMPLVRHIYNASKQISAAISPDQNSQAFKEVAIIRHPRVGEYALGFITSSVVLQTYS 200

Query: 200 GDEELCCVYVPTNHLYIGDIFLVNVKDVIRPNLSVREGIEIVVSGGMSMPQILSTLDSRV 259
           GDEELCCVYVPTNHLYIGDIFLVN KDVIRPNLSVREGIEIVVSGGMSMPQILSTLDS V
Sbjct: 201 GDEELCCVYVPTNHLYIGDIFLVNTKDVIRPNLSVREGIEIVVSGGMSMPQILSTLDSHV 260

Query: 260 PVEINRPDRR 269
           PVEI+RPDRR
Sbjct: 261 PVEISRPDRR 270


>Medtr1g022150.1 | like-COV protein | HC | chr1:6887607-6884866 |
           20130731
          Length = 266

 Score =  355 bits (911), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 172/259 (66%), Positives = 204/259 (78%), Gaps = 13/259 (5%)

Query: 17  NRDRDRELLIPVAN-------XXXXXXXXXXXXXXXXMHHAGRETFYKVVRSWASKKFMT 69
           +  RD ELLIPV+                         HH+G+E F KV+RSWASKKFMT
Sbjct: 2   SASRDLELLIPVSKIPENGGSKSSSTSSSPGGMVLSTQHHSGQEAFSKVIRSWASKKFMT 61

Query: 70  GCVILLPIAITFYITWWFIHFVDGFFSPIYAQLGINIFGLGFITSITFIFLVGVFMSSWL 129
           GCVILLPIAITFYITW F+ FVDGFFSP+Y  LGIN+FGLGF+TSITFIFLVG+FMSSWL
Sbjct: 62  GCVILLPIAITFYITWGFVRFVDGFFSPVYNHLGINVFGLGFVTSITFIFLVGIFMSSWL 121

Query: 130 GASVLGLGEWFIKRMPLVRHIYNASKQISAAISPDQNSQAFKEVAIIRHPRVGEYAFGFI 189
           GASVL LGE FIK+MPLV +IY ASKQISAAISPDQ+S AFKEVA++RHPR+GEYA GFI
Sbjct: 122 GASVLTLGELFIKKMPLVSYIYAASKQISAAISPDQSSNAFKEVALVRHPRIGEYALGFI 181

Query: 190 TSSVVLQTYSGDEELCCVYVPTNHLYIGDIFLVNVKDVIRPNLSVREGIEIVVSGGMSMP 249
           TS+V+L+    +EEL CVY+PTNHLY+GDIFLV+  D++RPNLSVREGIEIV+SGGMS+P
Sbjct: 182 TSTVILRKSRDEEELYCVYIPTNHLYLGDIFLVSPNDILRPNLSVREGIEIVISGGMSIP 241

Query: 250 QILSTLD------SRVPVE 262
           Q+++T D      SR+P+ 
Sbjct: 242 QVMTTGDAHAKLASRIPIS 260


>Medtr3g095210.1 | like-COV protein | HC | chr3:43501196-43508582 |
           20130731
          Length = 258

 Score =  332 bits (850), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 151/222 (68%), Positives = 187/222 (84%), Gaps = 5/222 (2%)

Query: 48  HHAGRETFYKVVRSWASKKFMTGCVILLPIAITFYITWWFIHFVDGFFSPIYAQLGINIF 107
           + + R     V++SW SKKFMTGCV+L P+A+TF+ITWWFI FVDGFFSP+Y+  G+ IF
Sbjct: 35  NSSTRRACCFVLQSWVSKKFMTGCVVLFPVAVTFFITWWFIQFVDGFFSPLYSSFGVEIF 94

Query: 108 GLGFITSITFIFLVGVFMSSWLGASVLGLGEWFIKRMPLVRHIYNASKQISAAISPDQNS 167
           GLGFITS+ F+F++GVF+SSW+GA+V  +GEW IK+MPLVRHIY+ASKQISAAISPDQN+
Sbjct: 95  GLGFITSLAFVFVIGVFVSSWMGATVFWIGEWLIKQMPLVRHIYSASKQISAAISPDQNT 154

Query: 168 QAFKEVAIIRHPRVGEYAFGFITSSVVLQTYSGDEELCCVYVPTNHLYIGDIFLVNVKDV 227
            AFKEVAIIRHPRVGEYAFGFITS+V LQ  + DEELC V++PTNHLYIGDI L+N KDV
Sbjct: 155 TAFKEVAIIRHPRVGEYAFGFITSTVTLQKENEDEELCSVFIPTNHLYIGDIILINSKDV 214

Query: 228 IRPNLSVREGIEIVVSGGMSMPQILSTLDSRVPVEINRPDRR 269
           IRPNLS+REGIEI+VSGGM+MPQ++S ++      +  P+ R
Sbjct: 215 IRPNLSIREGIEIIVSGGMTMPQVISPIE-----RVAHPNER 251


>Medtr8g103400.2 | like-COV protein | HC | chr8:43504245-43508851 |
           20130731
          Length = 199

 Score =  308 bits (790), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 152/177 (85%), Positives = 156/177 (88%)

Query: 20  RDRELLIPVANXXXXXXXXXXXXXXXXMHHAGRETFYKVVRSWASKKFMTGCVILLPIAI 79
           RDRELLIPVAN                +HHAGRETF KVV+SWASKKFMTGCVIL PIAI
Sbjct: 21  RDRELLIPVANSGDHSNASKPSSSSSSVHHAGRETFSKVVQSWASKKFMTGCVILFPIAI 80

Query: 80  TFYITWWFIHFVDGFFSPIYAQLGINIFGLGFITSITFIFLVGVFMSSWLGASVLGLGEW 139
           TFYITWWFIHFVDGFFSPIY  LGINIFGLGFITSITFIFL+G+FMSSWLGASVLGLGEW
Sbjct: 81  TFYITWWFIHFVDGFFSPIYVHLGINIFGLGFITSITFIFLIGIFMSSWLGASVLGLGEW 140

Query: 140 FIKRMPLVRHIYNASKQISAAISPDQNSQAFKEVAIIRHPRVGEYAFGFITSSVVLQ 196
           FIKRMPLVRHIYNASKQISAAISPDQNSQAFKEVAIIRHPRVGEYA GFITSSVVLQ
Sbjct: 141 FIKRMPLVRHIYNASKQISAAISPDQNSQAFKEVAIIRHPRVGEYALGFITSSVVLQ 197