Miyakogusa Predicted Gene

Lj4g3v3044970.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v3044970.1 tr|G7L7G1|G7L7G1_MEDTR tRNA
A64-2'-O-ribosylphosphate transferase OS=Medicago truncatula
GN=MTR_8g10,78.82,0,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
(Phosphotyrosine protein) phosphatases II,NULL; coi,CUFF.52182.1
         (431 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g102540.1 | initiator tRNA phosphoribosyl-transferase, put...   668   0.0  
Medtr8g102540.4 | initiator tRNA phosphoribosyl-transferase, put...   667   0.0  
Medtr8g102540.3 | initiator tRNA phosphoribosyl-transferase, put...   667   0.0  
Medtr8g102540.2 | initiator tRNA phosphoribosyl-transferase, put...   535   e-152

>Medtr8g102540.1 | initiator tRNA phosphoribosyl-transferase,
           putative | HC | chr8:43172217-43175922 | 20130731
          Length = 515

 Score =  668 bits (1724), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 335/425 (78%), Positives = 366/425 (86%), Gaps = 25/425 (5%)

Query: 1   MVVDSTRRGKRFPDSMSKTIPIWTCVLNRAIANFRRDFH-GDSSSPELIQDSNGCEYDEP 59
           M+VDSTR+GKRFPDSMSKTIPIWTCVLNRAIA F RDFH  D+S+P+L +DS        
Sbjct: 106 MIVDSTRKGKRFPDSMSKTIPIWTCVLNRAIAQFIRDFHMDDTSAPQLSEDS-------- 157

Query: 60  AKVARDVSSDWDCSLHLPLWVSGTEKASIEERLEEWTERLKASGADIATLAACLKKPLRP 119
                    DWDCSLHLPLWV  TEKASIEE LEEWTE+LKASGADIA+L+A LKKPLRP
Sbjct: 158 ---------DWDCSLHLPLWVPLTEKASIEEHLEEWTEQLKASGADIASLSASLKKPLRP 208

Query: 120 LWISQKTVIWLNEVPHHDSWDFTPVILVSASSTI-GISQH-RTTSEFSWNYIPGAGDDEE 177
           LWISQKTVIWLNEVPHHDSWDFTP+ILVSASS+  G+SQH +T SEFSWNYIPGAGDDEE
Sbjct: 209 LWISQKTVIWLNEVPHHDSWDFTPIILVSASSSSNGVSQHNKTNSEFSWNYIPGAGDDEE 268

Query: 178 SWARGLSPALFWNHVYDLINSGPDVCNHKVADIVEKSRVQRAYRGEIAPQIRVKSLNSAF 237
           SW+RGL+P LFWNHVYDLINSGPDVCN KVADIVEK RV+R YRGE APQIRVKSL    
Sbjct: 269 SWSRGLTPPLFWNHVYDLINSGPDVCNQKVADIVEKGRVRRVYRGESAPQIRVKSL---- 324

Query: 238 LSQEEPSLVSDISNIKIYPESSDDFAMSWLGSSNLAVGTSQIAVDAADVDCILNCDCESI 297
            S EEPSL SD+SNI++  +SS+D  +SWLGS+NLAVG SQ A DAADVDCILNCD ESI
Sbjct: 325 -SHEEPSLASDVSNIEVDTKSSEDSEISWLGSTNLAVGASQSATDAADVDCILNCDYESI 383

Query: 298 TVSLPSAGAYLHLPMLTSKFDRFSLLNNLPKAVSFAKFNLGQGKRLLVCCNNGEDISVCV 357
           TV LPS+ AYLHLP++ SKFDRFSLLNNLPKAVSFAKFNL QGKRLLVCCN+GEDIS+CV
Sbjct: 384 TVCLPSSEAYLHLPIVNSKFDRFSLLNNLPKAVSFAKFNLSQGKRLLVCCNDGEDISICV 443

Query: 358 CLASLMSLFEEKGNFDDGKSFNLTQVTKWDIRRRLVYVCKFATNARPSRGNLRQVFNFLI 417
           CLA LMSLF+EKG FDDGKSFN T VTKWD+RRRLV+VCKFATNARP RGNLRQVFNFLI
Sbjct: 444 CLAILMSLFDEKGTFDDGKSFNTTHVTKWDMRRRLVFVCKFATNARPCRGNLRQVFNFLI 503

Query: 418 GGKCI 422
           GGKCI
Sbjct: 504 GGKCI 508


>Medtr8g102540.4 | initiator tRNA phosphoribosyl-transferase,
           putative | HC | chr8:43172649-43175922 | 20130731
          Length = 410

 Score =  667 bits (1721), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 335/425 (78%), Positives = 366/425 (86%), Gaps = 25/425 (5%)

Query: 1   MVVDSTRRGKRFPDSMSKTIPIWTCVLNRAIANFRRDFH-GDSSSPELIQDSNGCEYDEP 59
           M+VDSTR+GKRFPDSMSKTIPIWTCVLNRAIA F RDFH  D+S+P+L +DS        
Sbjct: 1   MIVDSTRKGKRFPDSMSKTIPIWTCVLNRAIAQFIRDFHMDDTSAPQLSEDS-------- 52

Query: 60  AKVARDVSSDWDCSLHLPLWVSGTEKASIEERLEEWTERLKASGADIATLAACLKKPLRP 119
                    DWDCSLHLPLWV  TEKASIEE LEEWTE+LKASGADIA+L+A LKKPLRP
Sbjct: 53  ---------DWDCSLHLPLWVPLTEKASIEEHLEEWTEQLKASGADIASLSASLKKPLRP 103

Query: 120 LWISQKTVIWLNEVPHHDSWDFTPVILVSASSTI-GISQH-RTTSEFSWNYIPGAGDDEE 177
           LWISQKTVIWLNEVPHHDSWDFTP+ILVSASS+  G+SQH +T SEFSWNYIPGAGDDEE
Sbjct: 104 LWISQKTVIWLNEVPHHDSWDFTPIILVSASSSSNGVSQHNKTNSEFSWNYIPGAGDDEE 163

Query: 178 SWARGLSPALFWNHVYDLINSGPDVCNHKVADIVEKSRVQRAYRGEIAPQIRVKSLNSAF 237
           SW+RGL+P LFWNHVYDLINSGPDVCN KVADIVEK RV+R YRGE APQIRVKSL    
Sbjct: 164 SWSRGLTPPLFWNHVYDLINSGPDVCNQKVADIVEKGRVRRVYRGESAPQIRVKSL---- 219

Query: 238 LSQEEPSLVSDISNIKIYPESSDDFAMSWLGSSNLAVGTSQIAVDAADVDCILNCDCESI 297
            S EEPSL SD+SNI++  +SS+D  +SWLGS+NLAVG SQ A DAADVDCILNCD ESI
Sbjct: 220 -SHEEPSLASDVSNIEVDTKSSEDSEISWLGSTNLAVGASQSATDAADVDCILNCDYESI 278

Query: 298 TVSLPSAGAYLHLPMLTSKFDRFSLLNNLPKAVSFAKFNLGQGKRLLVCCNNGEDISVCV 357
           TV LPS+ AYLHLP++ SKFDRFSLLNNLPKAVSFAKFNL QGKRLLVCCN+GEDIS+CV
Sbjct: 279 TVCLPSSEAYLHLPIVNSKFDRFSLLNNLPKAVSFAKFNLSQGKRLLVCCNDGEDISICV 338

Query: 358 CLASLMSLFEEKGNFDDGKSFNLTQVTKWDIRRRLVYVCKFATNARPSRGNLRQVFNFLI 417
           CLA LMSLF+EKG FDDGKSFN T VTKWD+RRRLV+VCKFATNARP RGNLRQVFNFLI
Sbjct: 339 CLAILMSLFDEKGTFDDGKSFNTTHVTKWDMRRRLVFVCKFATNARPCRGNLRQVFNFLI 398

Query: 418 GGKCI 422
           GGKCI
Sbjct: 399 GGKCI 403


>Medtr8g102540.3 | initiator tRNA phosphoribosyl-transferase,
           putative | HC | chr8:43172098-43175969 | 20130731
          Length = 436

 Score =  667 bits (1721), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 335/425 (78%), Positives = 366/425 (86%), Gaps = 25/425 (5%)

Query: 1   MVVDSTRRGKRFPDSMSKTIPIWTCVLNRAIANFRRDFH-GDSSSPELIQDSNGCEYDEP 59
           M+VDSTR+GKRFPDSMSKTIPIWTCVLNRAIA F RDFH  D+S+P+L +DS        
Sbjct: 27  MIVDSTRKGKRFPDSMSKTIPIWTCVLNRAIAQFIRDFHMDDTSAPQLSEDS-------- 78

Query: 60  AKVARDVSSDWDCSLHLPLWVSGTEKASIEERLEEWTERLKASGADIATLAACLKKPLRP 119
                    DWDCSLHLPLWV  TEKASIEE LEEWTE+LKASGADIA+L+A LKKPLRP
Sbjct: 79  ---------DWDCSLHLPLWVPLTEKASIEEHLEEWTEQLKASGADIASLSASLKKPLRP 129

Query: 120 LWISQKTVIWLNEVPHHDSWDFTPVILVSASSTI-GISQH-RTTSEFSWNYIPGAGDDEE 177
           LWISQKTVIWLNEVPHHDSWDFTP+ILVSASS+  G+SQH +T SEFSWNYIPGAGDDEE
Sbjct: 130 LWISQKTVIWLNEVPHHDSWDFTPIILVSASSSSNGVSQHNKTNSEFSWNYIPGAGDDEE 189

Query: 178 SWARGLSPALFWNHVYDLINSGPDVCNHKVADIVEKSRVQRAYRGEIAPQIRVKSLNSAF 237
           SW+RGL+P LFWNHVYDLINSGPDVCN KVADIVEK RV+R YRGE APQIRVKSL    
Sbjct: 190 SWSRGLTPPLFWNHVYDLINSGPDVCNQKVADIVEKGRVRRVYRGESAPQIRVKSL---- 245

Query: 238 LSQEEPSLVSDISNIKIYPESSDDFAMSWLGSSNLAVGTSQIAVDAADVDCILNCDCESI 297
            S EEPSL SD+SNI++  +SS+D  +SWLGS+NLAVG SQ A DAADVDCILNCD ESI
Sbjct: 246 -SHEEPSLASDVSNIEVDTKSSEDSEISWLGSTNLAVGASQSATDAADVDCILNCDYESI 304

Query: 298 TVSLPSAGAYLHLPMLTSKFDRFSLLNNLPKAVSFAKFNLGQGKRLLVCCNNGEDISVCV 357
           TV LPS+ AYLHLP++ SKFDRFSLLNNLPKAVSFAKFNL QGKRLLVCCN+GEDIS+CV
Sbjct: 305 TVCLPSSEAYLHLPIVNSKFDRFSLLNNLPKAVSFAKFNLSQGKRLLVCCNDGEDISICV 364

Query: 358 CLASLMSLFEEKGNFDDGKSFNLTQVTKWDIRRRLVYVCKFATNARPSRGNLRQVFNFLI 417
           CLA LMSLF+EKG FDDGKSFN T VTKWD+RRRLV+VCKFATNARP RGNLRQVFNFLI
Sbjct: 365 CLAILMSLFDEKGTFDDGKSFNTTHVTKWDMRRRLVFVCKFATNARPCRGNLRQVFNFLI 424

Query: 418 GGKCI 422
           GGKCI
Sbjct: 425 GGKCI 429


>Medtr8g102540.2 | initiator tRNA phosphoribosyl-transferase,
           putative | HC | chr8:43172212-43175969 | 20130731
          Length = 450

 Score =  535 bits (1378), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 272/353 (77%), Positives = 299/353 (84%), Gaps = 25/353 (7%)

Query: 1   MVVDSTRRGKRFPDSMSKTIPIWTCVLNRAIANFRRDFH-GDSSSPELIQDSNGCEYDEP 59
           M+VDSTR+GKRFPDSMSKTIPIWTCVLNRAIA F RDFH  D+S+P+L +DS        
Sbjct: 106 MIVDSTRKGKRFPDSMSKTIPIWTCVLNRAIAQFIRDFHMDDTSAPQLSEDS-------- 157

Query: 60  AKVARDVSSDWDCSLHLPLWVSGTEKASIEERLEEWTERLKASGADIATLAACLKKPLRP 119
                    DWDCSLHLPLWV  TEKASIEE LEEWTE+LKASGADIA+L+A LKKPLRP
Sbjct: 158 ---------DWDCSLHLPLWVPLTEKASIEEHLEEWTEQLKASGADIASLSASLKKPLRP 208

Query: 120 LWISQKTVIWLNEVPHHDSWDFTPVILVSASSTI-GISQH-RTTSEFSWNYIPGAGDDEE 177
           LWISQKTVIWLNEVPHHDSWDFTP+ILVSASS+  G+SQH +T SEFSWNYIPGAGDDEE
Sbjct: 209 LWISQKTVIWLNEVPHHDSWDFTPIILVSASSSSNGVSQHNKTNSEFSWNYIPGAGDDEE 268

Query: 178 SWARGLSPALFWNHVYDLINSGPDVCNHKVADIVEKSRVQRAYRGEIAPQIRVKSLNSAF 237
           SW+RGL+P LFWNHVYDLINSGPDVCN KVADIVEK RV+R YRGE APQIRVKSL    
Sbjct: 269 SWSRGLTPPLFWNHVYDLINSGPDVCNQKVADIVEKGRVRRVYRGESAPQIRVKSL---- 324

Query: 238 LSQEEPSLVSDISNIKIYPESSDDFAMSWLGSSNLAVGTSQIAVDAADVDCILNCDCESI 297
            S EEPSL SD+SNI++  +SS+D  +SWLGS+NLAVG SQ A DAADVDCILNCD ESI
Sbjct: 325 -SHEEPSLASDVSNIEVDTKSSEDSEISWLGSTNLAVGASQSATDAADVDCILNCDYESI 383

Query: 298 TVSLPSAGAYLHLPMLTSKFDRFSLLNNLPKAVSFAKFNLGQGKRLLVCCNNG 350
           TV LPS+ AYLHLP++ SKFDRFSLLNNLPKAVSFAKFNL QGKRLLVCCN+G
Sbjct: 384 TVCLPSSEAYLHLPIVNSKFDRFSLLNNLPKAVSFAKFNLSQGKRLLVCCNDG 436