Miyakogusa Predicted Gene

Lj4g3v3042750.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v3042750.1 tr|I3S141|I3S141_LOTJA Profilin OS=Lotus
japonicus PE=2 SV=1,100,4.00001e-41,Profilin,Profilin/allergen;
PROFILIN,Profilin, plant; PROFILIN,Profilin/allergen; no
description,NUL,CUFF.52165.1
         (83 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g090030.1 | profilin | HC | chr6:34173969-34172008 | 20130731   155   6e-39
Medtr8g102330.1 | profilin | HC | chr8:43051409-43056475 | 20130731   154   2e-38

>Medtr6g090030.1 | profilin | HC | chr6:34173969-34172008 |
          20130731
          Length = 133

 Score =  155 bits (393), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 73/83 (87%), Positives = 77/83 (92%)

Query: 1  MSWQTYVDDHLMCDIDGTGHHLTASAIVGHDGSVWAQSTSFPQLKPQEITGIMKDFDEPG 60
          MSWQTYVD+HLMCDIDGTGHHLTA+AI+GHDGSVWAQSTSFPQ KP EITGIMKDFDEPG
Sbjct: 1  MSWQTYVDEHLMCDIDGTGHHLTAAAILGHDGSVWAQSTSFPQFKPDEITGIMKDFDEPG 60

Query: 61 FLAPTGLHLGGTKYMVIQGESGA 83
           LAPTG+HLG  KYMVIQGE GA
Sbjct: 61 HLAPTGMHLGEIKYMVIQGEPGA 83


>Medtr8g102330.1 | profilin | HC | chr8:43051409-43056475 |
          20130731
          Length = 133

 Score =  154 bits (389), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 70/83 (84%), Positives = 77/83 (92%)

Query: 1  MSWQTYVDDHLMCDIDGTGHHLTASAIVGHDGSVWAQSTSFPQLKPQEITGIMKDFDEPG 60
          MSWQTYVD+HLMCDIDGTGHHL+A+AI+GHDGSVWAQS+SFPQ KP+EI  I KDFDEPG
Sbjct: 1  MSWQTYVDEHLMCDIDGTGHHLSAAAIIGHDGSVWAQSSSFPQFKPEEINAINKDFDEPG 60

Query: 61 FLAPTGLHLGGTKYMVIQGESGA 83
           LAPTGLH+GGTKYMVIQGE GA
Sbjct: 61 TLAPTGLHIGGTKYMVIQGEPGA 83