Miyakogusa Predicted Gene
- Lj4g3v3017370.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v3017370.2 Non Characterized Hit- tr|A2WM27|A2WM27_ORYSI
Putative uncharacterized protein OS=Oryza sativa
subsp,27.82,2e-18,Transposase_24,Transposase, Ptta/En/Spm, plant;
coiled-coil,NULL; seg,NULL,CUFF.52154.2
(382 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr2g092960.1 | Myb/SANT-like DNA-binding domain protein | LC ... 69 1e-11
Medtr5g048720.1 | hypothetical protein | LC | chr5:21302106-2130... 68 1e-11
Medtr8g040975.1 | hypothetical protein | LC | chr8:15422135-1542... 68 1e-11
Medtr2g037270.1 | Ulp1 protease family, carboxy-terminal domain ... 50 4e-06
Medtr3g011560.1 | TNP1 | LC | chr3:2886243-2889912 | 20130731 50 5e-06
Medtr8g017000.1 | Ulp1 protease family, carboxy-terminal domain ... 50 5e-06
>Medtr2g092960.1 | Myb/SANT-like DNA-binding domain protein | LC |
chr2:39569693-39563388 | 20130731
Length = 1223
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 113/259 (43%), Gaps = 23/259 (8%)
Query: 64 DMPKGQLIIVPFDRQR-RACGQAAALLSGACGRIVLDPNNVPINFESWKEVVDPYKDDCF 122
D GQ I + FD+ ++ G+ G L + + I E W V KD+ +
Sbjct: 551 DRADGQRIPIEFDQSTGKSIGENKTKFKSYLG--FLGRSKISILIEDWDSVDANVKDEIW 608
Query: 123 NTLKNLFHFQTLELFAKRYCLLIMGRKYRNGKLKLWNSKYDPSYSRGYLIANVPDGVPKD 182
+ ++ K++ + G ++R K L S+Y RG + + ++
Sbjct: 609 TEILKIWDVPNSGFLRKKWIAYV-GERWRAFKTNL-TSRYIHGDLRGQSPLEAYNFLDEE 666
Query: 183 QWSSFVDYHLKQEYQELCQRNSEARKKQTIPH---TGGSKLLSRRQYEMEME-----LGR 234
W +FV L +QE+ ++ + T PH GG +LL + + +++ LG
Sbjct: 667 TWQAFVQMRLDPAFQEIRKKAQMSSAHHTTPHRLSRGGYELLQEKIMQEKLKQKQGSLGD 726
Query: 235 EV-------SRGEMYIATHKKSNGSYVNEDARSVGVLVEQELSQTLD--FSEVSKNDALA 285
V +R E + +K +G Y +ED+R + ++ + +T F + D LA
Sbjct: 727 SVAAPPSPPARHEQWKRARQKPSGDYTSEDSRIIAEKIDSLVEKTAQGTFVPQGRKDILA 786
Query: 286 KVLG-PDHSGCVRGLGVGA 303
+ +G P+HSG VRG+G G
Sbjct: 787 EAIGKPEHSGFVRGVGRGV 805
>Medtr5g048720.1 | hypothetical protein | LC |
chr5:21302106-21300391 | 20130731
Length = 194
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 63/116 (54%), Gaps = 6/116 (5%)
Query: 229 EMELGREVSRGEMYIATHKKSNGSYVNEDARSVGVLVEQELSQTLDFSEVSKNDALAKVL 288
E+ GRE SRG+MY+ +HK + G +VNE A L++ E+ T +N+A KV
Sbjct: 20 ELRYGREYSRGDMYVVSHKDAKGKFVNEYASQKAELLQVEMQNT-----QCENEAFFKVF 74
Query: 289 GPDHSGCVRGLGVGALHSVAFRSTTTQMKNSISSAEST-QLNEELNSLKTKLAASD 343
+H+G VR +G+G S +T +SI S E ++ E++SLK K + D
Sbjct: 75 EKEHAGYVRSMGLGITPSRISSPSTRLASSSIESNEKMLKMQAEIDSLKEKASQVD 130
>Medtr8g040975.1 | hypothetical protein | LC |
chr8:15422135-15424182 | 20130731
Length = 278
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 70/133 (52%), Gaps = 8/133 (6%)
Query: 229 EMELGREVSRGEMYIATHKKSNGSYVNEDARSVGVLVEQELSQTLDFSEVSKNDALAKVL 288
E+ GRE SRG+MY +HK + G +VNE AR L++ E+ T +N+A KV
Sbjct: 20 ELRYGREYSRGDMYAVSHKDAKGKFVNEYARQKAELLQVEMQNT-----QCENEAFFKVF 74
Query: 289 GPDHSGCVRGLGVGALHSVAFRSTTTQMKNSISSAEST-QLNEELNSLKTKLAASDENIK 347
G +H+G VR +G+G S +T +SI + E ++ E++SLK K AS +
Sbjct: 75 GKEHAGYVRSMGLGITPSRISSHSTRSASSSIEANEKMLKMQAEIDSLKEK--ASQVDFL 132
Query: 348 TLQTVLFAYMQMK 360
Q MQ++
Sbjct: 133 KAQVAFLMQMQVQ 145
>Medtr2g037270.1 | Ulp1 protease family, carboxy-terminal domain
protein | LC | chr2:16185805-16182137 | 20130731
Length = 694
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 100/248 (40%), Gaps = 27/248 (10%)
Query: 105 INFESWKEVVDPYKDDCFNTLKNLFHFQTLELFAKRYCLLIMGRKYRNGKLKLWNSKYDP 164
I W V D KD+ + ++ + ++ K+ + G +++ K L S+Y
Sbjct: 72 ILISDWNSVPDATKDEIWKSITAKWDMPNDKIVKKK-TISYAGERWKAFKYSL-TSRY-- 127
Query: 165 SYSRGYLIANVP----DGVPKDQWSSFVDYHLKQEYQELCQRNSEARKKQTIPH---TGG 217
G I P D + +D W F+ + + E + + PH GG
Sbjct: 128 -LFDGENIDKSPMETYDFIDEDIWQEFIRTRAEPSFLEKRLNAQQTQAHNKYPHRLSQGG 186
Query: 218 SKLLSRRQYEMEMELGREVS------------RGEMYIATHKKSNGSYVNEDARSVGVLV 265
+LL ++ E +++ +E + R E + K +G Y +ED R V +
Sbjct: 187 YELLEKKMMEEKLKERQEAAGDIEVPPPSPPQRHEKWKRARIKPSGEYTSEDTRVVAETI 246
Query: 266 EQELSQTLDFSEVSKNDALAKVLGPD-HSGCVRGLGVGALHSVAFRSTTTQMKNSISSAE 324
+ +S F + + D L K LG D H G VR +G G F S + + IS A+
Sbjct: 247 DSLVSD--GFVQNGREDILVKALGQDEHPGRVRAVGRGVGIREYFGSKSHSTPSVISGAQ 304
Query: 325 STQLNEEL 332
L +++
Sbjct: 305 LAALTKKI 312
>Medtr3g011560.1 | TNP1 | LC | chr3:2886243-2889912 | 20130731
Length = 681
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 100/248 (40%), Gaps = 27/248 (10%)
Query: 105 INFESWKEVVDPYKDDCFNTLKNLFHFQTLELFAKRYCLLIMGRKYRNGKLKLWNSKYDP 164
I W V D KD+ + ++ + ++ K+ + G +++ K L S+Y
Sbjct: 72 ILISDWNSVPDATKDEIWKSITAKWDMPNDKIVKKK-TISYAGERWKAFKYSL-TSRY-- 127
Query: 165 SYSRGYLIANVP----DGVPKDQWSSFVDYHLKQEYQELCQRNSEARKKQTIPH---TGG 217
G I P D + +D W F+ + + E + + PH GG
Sbjct: 128 -LFDGENIDKSPMETYDFIDEDIWQEFIRTRAEPSFLEKRLNAQQTQAHNKYPHRLSQGG 186
Query: 218 SKLLSRRQYEMEMELGREVS------------RGEMYIATHKKSNGSYVNEDARSVGVLV 265
+LL ++ E +++ +E + R E + K +G Y +ED R V +
Sbjct: 187 YELLEKKMMEEKLKERQEAAGDIEVPPPSPPQRHEKWKRARIKPSGEYTSEDTRVVAETI 246
Query: 266 EQELSQTLDFSEVSKNDALAKVLGPD-HSGCVRGLGVGALHSVAFRSTTTQMKNSISSAE 324
+ +S F + + D L K LG D H G VR +G G F S + + IS A+
Sbjct: 247 DSLVSD--GFVQNGREDILVKALGQDEHPGRVRAVGRGVGIREYFGSKSHSTPSVISGAQ 304
Query: 325 STQLNEEL 332
L +++
Sbjct: 305 LAALTKKI 312
>Medtr8g017000.1 | Ulp1 protease family, carboxy-terminal domain
protein | LC | chr8:5709180-5705508 | 20130731
Length = 694
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 100/248 (40%), Gaps = 27/248 (10%)
Query: 105 INFESWKEVVDPYKDDCFNTLKNLFHFQTLELFAKRYCLLIMGRKYRNGKLKLWNSKYDP 164
I W V D KD+ + ++ + ++ K+ + G +++ K L S+Y
Sbjct: 72 ILISDWNSVPDATKDEIWKSITAKWDMPNDKIVKKK-TISYAGERWKAFKYSL-TSRY-- 127
Query: 165 SYSRGYLIANVP----DGVPKDQWSSFVDYHLKQEYQELCQRNSEARKKQTIPH---TGG 217
G I P D + +D W F+ + + E + + PH GG
Sbjct: 128 -LFDGENIDKSPMETYDFIDEDIWQEFIRTRAEPSFLEKRLNAQQTQAHNKYPHRLSQGG 186
Query: 218 SKLLSRRQYEMEMELGREVS------------RGEMYIATHKKSNGSYVNEDARSVGVLV 265
+LL ++ E +++ +E + R E + K +G Y +ED R V +
Sbjct: 187 YELLEKKMMEEKLKERQEAAGDIEVPPPSPPQRHEKWKRARIKPSGEYTSEDTRVVAETI 246
Query: 266 EQELSQTLDFSEVSKNDALAKVLGPD-HSGCVRGLGVGALHSVAFRSTTTQMKNSISSAE 324
+ +S F + + D L K LG D H G VR +G G F S + + IS A+
Sbjct: 247 DSLVSD--GFVQNGREDILVKALGQDEHPGRVRAVGRGVGIREYFGSKSHSTPSVISGAQ 304
Query: 325 STQLNEEL 332
L +++
Sbjct: 305 LAALTKKI 312