Miyakogusa Predicted Gene

Lj4g3v3014220.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v3014220.1 Non Characterized Hit- tr|E1Z1V9|E1Z1V9_CHLVA
Putative uncharacterized protein OS=Chlorella
variabil,57.75,0.000000000000003,seg,NULL,CUFF.52045.1
         (159 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g099615.1 | hypothetical protein | HC | chr8:42117910-4211...   155   1e-38

>Medtr8g099615.1 | hypothetical protein | HC |
           chr8:42117910-42119726 | 20130731
          Length = 155

 Score =  155 bits (392), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 80/141 (56%), Positives = 91/141 (64%), Gaps = 13/141 (9%)

Query: 1   MSIAFLSVPTP---HQAHLFKFKNXXXXXXXXXXXXXXXXXXXXXXXXVIEEDPSSSSAD 57
           M+ AF +VPTP   H   L+K K                               SS+  D
Sbjct: 1   MTTAFFTVPTPQHYHHVQLYKPKKSWSTTKILVPPTLCSPTSLI----------SSAPDD 50

Query: 58  ELPIPDQSSYTTKQSGCKACGREEIERGCNGEGRIQGGIATVPGFGWWPIKAYRPCPEFL 117
           EL + DQS ++TKQSGCKACG EEIE+GCNGEGR+QGGIATVPGFGWWPIKAYRPCP F+
Sbjct: 51  ELAVSDQSVFSTKQSGCKACGNEEIEKGCNGEGRMQGGIATVPGFGWWPIKAYRPCPGFV 110

Query: 118 ASGGRYRRQGQSMDEVAFGRG 138
           ASGG+YRRQGQSMDEV  G G
Sbjct: 111 ASGGKYRRQGQSMDEVVSGSG 131