Miyakogusa Predicted Gene

Lj4g3v3014190.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v3014190.1 Non Characterized Hit- tr|F6HU30|F6HU30_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,52.74,0,ZF_RING_1,Zinc finger, RING-type, conserved site;
seg,NULL; OS12G0209700 PROTEIN,NULL; JUMONJI DOMAI,CUFF.52041.1
         (1250 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g099585.1 | RING/U-box protein | HC | chr8:42080666-420907...  1687   0.0  
Medtr4g110090.1 | PHD-finger protein, putative | HC | chr4:45846...    85   5e-16
Medtr7g112410.2 | poxvirus Ag35 surface protein | HC | chr7:4619...    80   1e-14
Medtr7g112410.1 | poxvirus Ag35 surface protein | HC | chr7:4619...    80   2e-14

>Medtr8g099585.1 | RING/U-box protein | HC | chr8:42080666-42090727 |
            20130731
          Length = 1270

 Score = 1687 bits (4368), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 885/1290 (68%), Positives = 991/1290 (76%), Gaps = 65/1290 (5%)

Query: 1    MEADFSMNDETVTLTHDPFDANHDNVNVDVEAERCGICMDTVVDRGVLDCCQHWFCFVCI 60
            ME+DF  ND  +TL+ D FD  +DN N+DVE E CGICMD V+DRGVLDCCQHWFCFVCI
Sbjct: 1    MESDFETND-MLTLSQDSFDDANDNDNLDVEGETCGICMDMVIDRGVLDCCQHWFCFVCI 59

Query: 61   DNWATITNLCPLCQNEFQLITCVPVYDTIGSNKVEDDSLYGEDDWSIEGTNNTLSFPSYY 120
            DNWATITNLCPLCQNEFQLITCVPVYDTIGSNKVED S + +DDWSI+G NN LSFPSYY
Sbjct: 60   DNWATITNLCPLCQNEFQLITCVPVYDTIGSNKVEDGSFFRDDDWSIDGKNNNLSFPSYY 119

Query: 121  IDENAVICLDGDGCKIRNELSTIEGDSDLDTSIACDLCDRWYHAFCVGFDTEGTSESTWL 180
            IDENAV CLDGDGCKIRN  +++E DS LDTSIACD CD WYHAFCVGFDTEGTSESTWL
Sbjct: 120  IDENAVTCLDGDGCKIRNGFASVEEDSGLDTSIACDSCDLWYHAFCVGFDTEGTSESTWL 179

Query: 181  CPRCTADEVSKGTDTNSTERATVEFNPDNSKGECHAEDSFSGKVSVTIADTGDTDVVVSM 240
            CPRC AD VSK TD NS + A++E NPD++  ECHA     G VSV+IADTG+T VVVSM
Sbjct: 180  CPRCVADAVSKETDGNSIKEASLECNPDSNNSECHA-----GIVSVSIADTGETAVVVSM 234

Query: 241  IGGNKWVSASSEKDILPLEVDGDPLPESCNLMSNTNNQNQGTEKTTMSPIREGEELELSL 300
            +  NKW+  +SE+ +LP EVDGD L E C LMS+TNNQ Q TEKT +SPI +GEELELSL
Sbjct: 235  VDRNKWIPETSERGLLPPEVDGDLLNEPCKLMSDTNNQLQATEKTNVSPIMKGEELELSL 294

Query: 301  SHNMSCNQTSKSLVHDDLKENVNGARSKLSSFDGTEILDVSHVKTSPSRTESDMGLHLGL 360
            SH      TSKS VH DLKE+ NG R + SSFDGT++ D S+ KTSP + ESDMGLHLGL
Sbjct: 295  SH-----PTSKSFVHSDLKESDNGTRCEPSSFDGTKLSDESNAKTSPCKIESDMGLHLGL 349

Query: 361  SVGSILS---------------------------GDETENNACKDNVRVTGGKRKHVDYS 393
            SVGS L+                           GD+ + NAC D+ RV G KRKH DYS
Sbjct: 350  SVGSFLTVDNVDKSESKDQATDPPCSIPEEFPLEGDKLDINACDDSARVAGRKRKHFDYS 409

Query: 394  YEQVHKKVDDGDGKPELSVEVSQKKIRVTDGQMTSANDSADALLSDNARKKPSLKHPPTQ 453
            +EQV  KV+D D  PELSVE SQKK R    QM  ANDS DA LSDNA+K P LKH PT+
Sbjct: 410  HEQVRIKVEDEDANPELSVEASQKKTRAAVSQMFRANDS-DAQLSDNAKKSPVLKHSPTK 468

Query: 454  EVVTSDIMNIVKGTNRRLSKELTGTYACDKLAEKKESMAGLRVKKIMKRVSDDGESSLMV 513
            E+  SDIMNIVKGTNRRL+K L  T A  KLAEKKE+M GLRVKKIMKRVSDDGESS +V
Sbjct: 469  EIAASDIMNIVKGTNRRLTKGLADTNASKKLAEKKENMTGLRVKKIMKRVSDDGESSSLV 528

Query: 514  QNLRKEIREAVRNKSSIKFEENHFDPKLLEAFRAAITGPKTELVNXXXXXXXXXXXXMLQ 573
            QNLRKEIREAVRNKSSI FEENHFD  LLEAFRAAITGPKTELVN            MLQ
Sbjct: 529  QNLRKEIREAVRNKSSINFEENHFDKNLLEAFRAAITGPKTELVNKLSPSALKAKKSMLQ 588

Query: 574  KGKVRENLTKKIFGTSNGRRKRAWDRDCEIEFWKYRCTRASKPEKIETLKSVLDLLRGSS 633
            KGKVRENLT+KIFGTSNGRRKRAWDRDCEIEFWKYRC RASKPEK+ETLKSVLDLLR SS
Sbjct: 589  KGKVRENLTRKIFGTSNGRRKRAWDRDCEIEFWKYRCMRASKPEKVETLKSVLDLLRKSS 648

Query: 634  ENLESKQTSEFEAKNSILSRLYLADTSVFPRKEDVKPLSVHTTIASSDQTKQNNPPGKGS 693
            EN ES++  E +AKN ILSRLY+ADTSVFPRKEDVKP         S+QTKQNNP  KG 
Sbjct: 649  ENPESERAPECQAKNPILSRLYIADTSVFPRKEDVKPF--------SEQTKQNNPSAKGP 700

Query: 694  NLSLDNNSVKTTEVNNLVLKAKVCSSGKKVDKKILHGLVGDKLASGKVSRSEGTLISSST 753
            N S+DN  +K TEVNNL+   +VC S KKVD KI+ G  G    S   SRSEG  +SSS 
Sbjct: 701  NQSVDNKIIKATEVNNLLSMTRVCLSEKKVD-KIVRGPAGKVQLS---SRSEGASVSSSA 756

Query: 754  GAKVDTKESGLKSDSMKGDKRKWALEVLARKTAAASRNTANESQEDNAMFKG-YPLLAQL 812
            GAKV TK+SGLKSDS+KGDKRKWALEVLARKTA AS+NTANESQED+A+FKG YPLLAQL
Sbjct: 757  GAKVGTKDSGLKSDSVKGDKRKWALEVLARKTAVASKNTANESQEDDAIFKGNYPLLAQL 816

Query: 813  PADMRPVLEACRHNKIPISVRQTQXXXXXXXXXXXXXXPVMCRSADTELAVADAINIEKG 872
            P DMRPVL  CRHNKIP+SVRQTQ              P++ R+ADTELAVADAINIEK 
Sbjct: 817  PTDMRPVLAPCRHNKIPVSVRQTQLYRLTERLLKNTNLPIIRRTADTELAVADAINIEKE 876

Query: 873  VADRSNSKLVYLNLCSQELLHCKNNTKLTATTDAN-PPASSPVHTDQSEPSTDDLLTDPE 931
            VADRS SKLVYLNLCSQELLH  NNTK    TD   P +SSPV TDQS  +TDDLLTDP 
Sbjct: 877  VADRSKSKLVYLNLCSQELLHRTNNTKSNINTDTTLPTSSSPVQTDQSVLNTDDLLTDPA 936

Query: 932  VQIALKNAGLLGDSPPGSPCKDKETCNEDGVSGPENILELDSHPELDIYGDFEYDLEDED 991
            VQIALKNAGL  DSPP SP K+ E CNE  VSGP++ILEL+SHPELDIYGDFEYDLED+D
Sbjct: 937  VQIALKNAGLFSDSPPSSPRKNNEICNEKEVSGPDDILELESHPELDIYGDFEYDLEDDD 996

Query: 992  FIGSSVSKVSNLKQEQSESKVKLVFSTMNFKNTDNVLDCTDCERSENKEVPGDAPCSPKC 1051
            +IG+SV+K+  LK+E SESKVKLVFST + K T+N LD  DC+ SEN EVPG A CSP C
Sbjct: 997  YIGASVTKIPKLKEEPSESKVKLVFSTTSLKKTNNALDSADCKGSENNEVPGVAFCSPNC 1056

Query: 1052 SNDAVHSESTNEAGIGQRSVSSEQLLCKGDVEPADSEFEELYGPDKEPLIKKFPDVESRS 1111
              DAV  +ST  A IGQ SVSS  LLC+G VEP DSEFE+LYGPDKEPLIKKFPD E +S
Sbjct: 1057 HRDAVQKDSTINAEIGQPSVSSGLLLCEGAVEPVDSEFEDLYGPDKEPLIKKFPDGELQS 1116

Query: 1112 LCGEGKTDTLTEANYCHNDEKHVLDKTVNASKLSND-------KSATVSETGEKIR---- 1160
            L GEGK +T +E N CH +E+  LDK +N ++L N+       K    S T E I+    
Sbjct: 1117 LHGEGKMETQSENNDCHKEEERDLDKAINGAELGNESVPIITGKPPNTSGTDENIQRKEE 1176

Query: 1161 -KEEEKSDIAAKQSDSVNHVARKVEAYIKEHIRPLCKSGVITAEQYRWAVAKTTEKVMKY 1219
             ++EE+SDI A++S++ N VA+KVEAYIKEHIRPLCKSGVITAEQYRWAVAKTTEKVMK+
Sbjct: 1177 RRKEERSDIPAQKSNNENQVAKKVEAYIKEHIRPLCKSGVITAEQYRWAVAKTTEKVMKH 1236

Query: 1220 HSKSKNANFLIKEGEKVKKLAEEYVEAAQQ 1249
            H KSKNANFL+KEGEKVKKLAE+YVE AQQ
Sbjct: 1237 HCKSKNANFLVKEGEKVKKLAEQYVETAQQ 1266


>Medtr4g110090.1 | PHD-finger protein, putative | HC |
           chr4:45846699-45843403 | 20130731
          Length = 614

 Score = 84.7 bits (208), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 50/157 (31%), Positives = 68/157 (43%), Gaps = 26/157 (16%)

Query: 35  CGICMDTVVDRGV-----LDCCQHWFCFVCIDNWATITNLCPLCQNEFQLITCVPVYDTI 89
           CGIC    ++RG+     +DCC H+FCFVCI  WA   + CPLC+  F  +  +P++D  
Sbjct: 34  CGICY---IERGISVPAQIDCCSHYFCFVCIMEWAKHESRCPLCRQRFSNVRRLPMHDVF 90

Query: 90  GSNKVEDDSLYGEDDWSIEGTNNTLSFPSYYIDENAVICLDGDGCKIRNELSTIEGDSDL 149
            S++   D      D       N  S P   +D NA             +    +G  D 
Sbjct: 91  SSSR---DVKIPIRDQVYHPHGNMTSGP---VDSNA-----------ERKCCICDGAKDE 133

Query: 150 DTSIACDLCDRWYHAFCVGFDTEGTSESTWLCPRCTA 186
           +  + CDLCD   H FCVG       E  W C  C  
Sbjct: 134 NLILICDLCDTVSHTFCVGLGYT-VPEGDWFCHDCAV 169


>Medtr7g112410.2 | poxvirus Ag35 surface protein | HC |
           chr7:46190529-46186663 | 20130731
          Length = 865

 Score = 80.1 bits (196), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 76/168 (45%), Gaps = 30/168 (17%)

Query: 24  DNVNVDVEAERCGICM---DTVVDRGVLDCCQHWFCFVCIDNWATITNLCPLCQNEFQLI 80
           +++  +V  + CGIC+   +    RGVL+ C H+FCF CI  W+ + + CPLC+  FQ I
Sbjct: 415 EDLKSEVGKQVCGICLSEENKRRVRGVLNSCTHYFCFACIMEWSKVESRCPLCKQRFQTI 474

Query: 81  TCVPVYDTIGSNKV----EDDSLYGEDDWSIEGTNNTLSFPSYYIDENAVICLDGDGCKI 136
           +  P   T     V    E D +Y       + T   L   SY     +V+C +   C  
Sbjct: 475 S-KPARSTTAEEAVIQVPERDQVY-------QPTEEELR--SYIDPYESVMCSE---CH- 520

Query: 137 RNELSTIEGDSDLDTSIACDLCDRWYHAFCVGFDTEGTSESTWLCPRC 184
                 + GD  L   + CD+CD   H +CVG   E   E  W C  C
Sbjct: 521 ------LGGDDGL--MLLCDICDSPAHTYCVGLGRE-VPEGNWYCDGC 559


>Medtr7g112410.1 | poxvirus Ag35 surface protein | HC |
           chr7:46190529-46186663 | 20130731
          Length = 904

 Score = 79.7 bits (195), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 75/168 (44%), Gaps = 30/168 (17%)

Query: 24  DNVNVDVEAERCGICM---DTVVDRGVLDCCQHWFCFVCIDNWATITNLCPLCQNEFQLI 80
           +++  +V  + CGIC+   +    RGVL+ C H+FCF CI  W+ + + CPLC+  FQ I
Sbjct: 415 EDLKSEVGKQVCGICLSEENKRRVRGVLNSCTHYFCFACIMEWSKVESRCPLCKQRFQTI 474

Query: 81  TCVPVYDTIGSNKV----EDDSLYGEDDWSIEGTNNTLSFPSYYIDENAVICLDGDGCKI 136
           +  P   T     V    E D +Y   +  +          SY     +V+C +   C  
Sbjct: 475 S-KPARSTTAEEAVIQVPERDQVYQPTEEELR---------SYIDPYESVMCSE---CH- 520

Query: 137 RNELSTIEGDSDLDTSIACDLCDRWYHAFCVGFDTEGTSESTWLCPRC 184
                 + GD  L   + CD+CD   H +CVG   E   E  W C  C
Sbjct: 521 ------LGGDDGL--MLLCDICDSPAHTYCVGLGRE-VPEGNWYCDGC 559