Miyakogusa Predicted Gene

Lj4g3v3003910.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v3003910.1 tr|I3SS10|I3SS10_LOTJA Nucleoside diphosphate
kinase OS=Lotus japonicus PE=2 SV=1,97.87,0,Nucleoside diphosphate
kinase, NDK,Nucleoside diphosphate kinase; no description,Nucleoside
diphosph,CUFF.52020.1
         (235 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g099450.1 | nucleoside diphosphate kinase-like protein | H...   318   4e-87
Medtr8g007235.1 | nucleoside diphosphate kinase-like protein | H...   192   2e-49
Medtr4g104030.1 | nucleoside diphosphate kinase-like protein | H...   191   4e-49
Medtr8g021233.1 | nucleoside diphosphate kinase-like protein | H...    59   3e-09

>Medtr8g099450.1 | nucleoside diphosphate kinase-like protein | HC |
           chr8:41955037-41951647 | 20130731
          Length = 234

 Score =  318 bits (814), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 165/214 (77%), Positives = 180/214 (84%), Gaps = 1/214 (0%)

Query: 23  YHSQGRXXXXXXXXXXXXXXXXLAXXXXXXXXXXXXAT-WVSGALALPAAAYMLQDQEVH 81
           +HSQGR                 A            +T W++GALALPAAAY+LQDQEVH
Sbjct: 21  FHSQGRAVAAASAVASITKMPLFASNYGRRTASGNGSTSWIAGALALPAAAYILQDQEVH 80

Query: 82  AAELERTFIAIKPDGVQRGLISEIISRFERKGFKLVGIKVLIPSKEFAQKHYHDLKERPF 141
           AAELERTFIAIKPDGVQRGLISEIISRFERKG+KLVGIKVL P+KEFA++HYHDLKERPF
Sbjct: 81  AAELERTFIAIKPDGVQRGLISEIISRFERKGYKLVGIKVLHPTKEFAKQHYHDLKERPF 140

Query: 142 FNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSQPGTIRGDLAVVVGRNIIHGS 201
           F+GLC+FLSSGPVIAMVWEG+GVI YGRKLIGATDPQKS+PGTIRGDLAVVVGRNIIHGS
Sbjct: 141 FDGLCDFLSSGPVIAMVWEGQGVIVYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGS 200

Query: 202 DGPETAKDEIKLWFKPEELVNFTSNAEKWVYGVN 235
           DGPETAKDEI LWFKPEELV+FTSN+EKWVYG N
Sbjct: 201 DGPETAKDEINLWFKPEELVSFTSNSEKWVYGEN 234


>Medtr8g007235.1 | nucleoside diphosphate kinase-like protein | HC |
           chr8:1369594-1366875 | 20130731
          Length = 149

 Score =  192 bits (488), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 90/147 (61%), Positives = 114/147 (77%), Gaps = 1/147 (0%)

Query: 86  ERTFIAIKPDGVQRGLISEIISRFERKGFKLVGIKVLIPSKEFAQKHYHDLKERPFFNGL 145
           E+TFI IKPDGVQRGL+ EIISRFE+KGF L G+K L   + FA+KHY DL  +PFF+GL
Sbjct: 3   EQTFIMIKPDGVQRGLVGEIISRFEKKGFYLKGLKFLNVERAFAEKHYADLSAKPFFSGL 62

Query: 146 CEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSQPGTIRGDLAVVVGRNIIHGSDGPE 205
            E++ SGPV+AM+WEG+ V+T GRK+IGAT+P +S+PGTIRGD AV +GRN+IHGSD  E
Sbjct: 63  VEYIVSGPVVAMIWEGKNVVTTGRKIIGATNPAQSEPGTIRGDFAVEIGRNVIHGSDSVE 122

Query: 206 TAKDEIKLWFKPEELVNFTSNAEKWVY 232
           +A  EI LWF PE    + S+   W+Y
Sbjct: 123 SANKEIGLWF-PEGPAAWQSSLHSWIY 148


>Medtr4g104030.1 | nucleoside diphosphate kinase-like protein | HC |
           chr4:43032291-43037070 | 20130731
          Length = 230

 Score =  191 bits (486), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 86/148 (58%), Positives = 113/148 (76%)

Query: 84  ELERTFIAIKPDGVQRGLISEIISRFERKGFKLVGIKVLIPSKEFAQKHYHDLKERPFFN 143
           +++RT+I +KPDGVQRGL+ EIISRFE+KGFKL+G+K+   SKE A++HY DL +R FF 
Sbjct: 81  QVDRTYIMVKPDGVQRGLVGEIISRFEKKGFKLIGLKLFQCSKELAEEHYKDLNQRSFFP 140

Query: 144 GLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSQPGTIRGDLAVVVGRNIIHGSDG 203
            L E+++SGPV++M WEG GV+   RKLIGAT+P +++PGTIRGD AV  GRN+IHGSD 
Sbjct: 141 KLSEYITSGPVVSMAWEGVGVVPSARKLIGATNPLQAEPGTIRGDFAVETGRNVIHGSDS 200

Query: 204 PETAKDEIKLWFKPEELVNFTSNAEKWV 231
           PE  + EI LWFK  EL  +T     W+
Sbjct: 201 PENGEREIALWFKEGELCEWTPVLHPWL 228


>Medtr8g021233.1 | nucleoside diphosphate kinase-like protein | HC |
           chr8:7615826-7619170 | 20130731
          Length = 215

 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 53/100 (53%)

Query: 82  AAELERTFIAIKPDGVQRGLISEIISRFERKGFKLVGIKVLIPSKEFAQKHYHDLKERPF 141
           +  +E+T   IKPDG+      +I       GF +V  K++   +   ++ Y +   + F
Sbjct: 68  STNIEKTLAIIKPDGLLGNYTDDIKRTILEYGFSIVKEKIVQLDETTVKRFYAEHSSKNF 127

Query: 142 FNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSQ 181
           F+ L ++++SGPV+ MV E +  I   R L+G TD  K++
Sbjct: 128 FSSLVKYMTSGPVLTMVLEKDNAIADWRALMGPTDASKAK 167