Miyakogusa Predicted Gene

Lj4g3v3002780.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v3002780.1 Non Characterized Hit- tr|C6SW29|C6SW29_SOYBN
Putative uncharacterized protein OS=Glycine max PE=2
S,30.95,0.18,seg,NULL,CUFF.52011.1
         (185 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g099375.1 | hypothetical protein | HC | chr8:41868872-4186...   194   5e-50

>Medtr8g099375.1 | hypothetical protein | HC |
           chr8:41868872-41869791 | 20130731
          Length = 174

 Score =  194 bits (492), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 102/146 (69%), Positives = 122/146 (83%), Gaps = 5/146 (3%)

Query: 1   MASAQAQKPTTTIEVCQPKSQHSSFGQKLSEITSKAFKGHHARHGSNQNQIQHF-SQTQV 59
           MASAQ+ KP+   EVCQPK+QHSS  QK+SEIT+KAFKGHHARHGS QNQ+Q++ SQ+QV
Sbjct: 1   MASAQSMKPSAATEVCQPKTQHSSISQKISEITNKAFKGHHARHGSTQNQVQNYTSQSQV 60

Query: 60  ESHGNSGSKTETH--GQTQTQRDRKHGVTKTEITVCVVQAQITQTKEDPPSPRGTTTKCF 117
           ES+G++GSKTETH  GQTQTQ D+KHGVTKT ITVCVVQA+IT+TKE  P P G TT CF
Sbjct: 61  ESNGHNGSKTETHHYGQTQTQHDKKHGVTKTHITVCVVQAEITETKEG-PYPYGATTTCF 119

Query: 118 GPHARKIGEVNNKKETNIFRRIKNGM 143
           G   +K  E+NNKK+ N+F+RIKNGM
Sbjct: 120 GA-PKKNRELNNKKDMNLFQRIKNGM 144