Miyakogusa Predicted Gene

Lj4g3v3002620.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v3002620.1 tr|F4JZY1|F4JZY1_ARATH COP1-interactive protein 1
OS=Arabidopsis thaliana GN=CIP1 PE=4
SV=1,26.79,2e-17,coiled-coil,NULL; seg,NULL,CUFF.51997.1
         (468 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g099265.1 | myosin heavy chain-like protein | HC | chr8:41...   543   e-154
Medtr8g099290.1 | myosin heavy chain-like protein, putative | LC...    92   2e-18
Medtr8g099275.1 | COP1-interactive protein, putative | HC | chr8...    87   4e-17
Medtr8g099280.1 | myosin heavy chain-like protein, putative | LC...    64   3e-10

>Medtr8g099265.1 | myosin heavy chain-like protein | HC |
           chr8:41783160-41786198 | 20130731
          Length = 802

 Score =  543 bits (1400), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 312/551 (56%), Positives = 374/551 (67%), Gaps = 83/551 (15%)

Query: 1   MAQVNELEHETKSLRTQKDEMEERIKCG---ALKQTDQLMEQLNVMQNKLDSLGNLNREL 57
           MAQVNEL  ET+SLRTQKDEMEE+IKC    A  Q D LME+LNVMQ KLDS+ N N+EL
Sbjct: 238 MAQVNELVLETESLRTQKDEMEEKIKCDQNEASMQRDDLMEKLNVMQQKLDSIENHNKEL 297

Query: 58  KVEMNRKKEQITQYQIQIENLEENVAETKSIEKGMVEQKEGFLARIKDLEHELETQSNQ- 116
           + ++ RK E+I+Q+ IQ+ENL+EN+AE KS E  M+E+KEGFLAR+K++E +LETQSNQ 
Sbjct: 298 EAQLERKAEEISQFLIQMENLKENLAEMKSTEHTMMEEKEGFLARLKEMEFKLETQSNQK 357

Query: 117 -----------------------------------------RNELEEELRSVSYEMKQVE 135
                                                    RNELEE+LR  +YE+KQ+ 
Sbjct: 358 SELQEELAEMRSTEQTMMEEKEGFLARLKNMELELETQINQRNELEEQLRDTNYEIKQLM 417

Query: 136 NENKTLHDRNCDLEAAMAHKGDDMFGFLKKHESHENEACVEATALKAE------------ 183
           NENK L DRN +L+AAM  +G+++  FLK+++S EN A +E  ALKAE            
Sbjct: 418 NENKALQDRNHELKAAMIQRGEEISNFLKENDSDENGASIEIMALKAEVNDMRLALDNLQ 477

Query: 184 -----LEHQNERNQKEHAESLTKMETLNVKLETQIAEQEKIIKDQAATIDRISAEEKQAK 238
                LE QNERNQKE+AESL K+ETLN KL  QIA+QEK IKDQ +TIDRI+AE+KQ  
Sbjct: 478 EHKTKLELQNERNQKEYAESLAKIETLNTKLTGQIADQEKTIKDQTSTIDRINAEQKQTI 537

Query: 239 IMLNRLKFNPRFAEKKMEELVEELRKKMEDSIRLLHQRIHVAEQLNNENKNSCKMTKERY 298
           I  N+L  N R  E+KMEEL E+LRKKMED+IRLLHQRIHVAEQLNNENK+SCK+TK RY
Sbjct: 538 ITSNKLMLNQRSTERKMEELAEKLRKKMEDNIRLLHQRIHVAEQLNNENKSSCKLTKIRY 597

Query: 299 EEENKILGEKVACYEEKLRTRKEGVVEFEPNR-------------FEL-SVINGLNVAAE 344
           EEENKILGEKV+ YEE+LR  KEG      N              FE  + +NGL+V A 
Sbjct: 598 EEENKILGEKVSIYEEELRRLKEGAANVTANASEETHSPVVDLKGFEFDAALNGLDVVAA 657

Query: 345 KVEEHSDFILSRVSKMLCEVESAKDWIKKRSGEMKELKDNVNXXXXXXXXXXXX------ 398
           KVEEH + ++S VSKMLCEV+ AKDWIKK + EMK+LK+NV+                  
Sbjct: 658 KVEEHRECVMSNVSKMLCEVQFAKDWIKKMNVEMKQLKENVDCLTTLLSEKEEQELLLRD 717

Query: 399 -VWELEAKVSKEGGEKLNLTKTVRKLEKKVGKLENNLKEKDEDLICLGEKKREVIRQLCF 457
            VW LEA VSKEGGEKLNLT  V +LEKKVGK+E NLKEKDEDL  LGEKKRE IRQLC 
Sbjct: 718 KVWNLEATVSKEGGEKLNLTNAVSQLEKKVGKMEKNLKEKDEDLDSLGEKKREAIRQLCL 777

Query: 458 VVDFHRDRCNY 468
           VV+FHRDRCNY
Sbjct: 778 VVEFHRDRCNY 788


>Medtr8g099290.1 | myosin heavy chain-like protein, putative | LC |
           chr8:41810564-41812543 | 20130731
          Length = 659

 Score = 91.7 bits (226), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 88/318 (27%), Positives = 169/318 (53%), Gaps = 41/318 (12%)

Query: 181 KAELEHQNERNQKEHAESLTKMETLNVKLETQIAEQEKIIKDQAATIDRISAEEKQAKIM 240
           K ELEH  E+ ++EHA++LTK++  N +L  +  +  +I++++      + +     ++ 
Sbjct: 335 KEELEHHIEKIREEHAQALTKVDNENNELANKYLDLLRILEERDEEYKHVDSWYSDCQVK 394

Query: 241 LNRLKFNPR-FAEKKMEEL-------------VEELRKKME---DSIRLLHQRI---HVA 280
           L R ++  R  AE  +E++             VEEL++ +E   D +  L + +    V 
Sbjct: 395 LKRAEWKMRKMAEMFLEDIDSKDQMVADLEHQVEELKRDLEEKGDEVSSLLENVMNLEVK 454

Query: 281 EQLNNENKNSCKMTKERYEEENKILGEKVA----CYEEKLRTRKEGVVEFEPNRFELSVI 336
             L+N+ + S +  +E++++  + L +++A     + E + + K+ V          S+I
Sbjct: 455 LCLSNQEEESFRKVEEKFQQVQRALEDRIATDNEAFHETITSIKKCVN---------SMI 505

Query: 337 NGLNVAAEKVEEHSDFILSRVSKMLCEVESAKDWIKKRSGEMKELKDNVNX-------XX 389
           +G++  + K  +  +   +R+S +  E++ AK+ + + S E  +L+ + N          
Sbjct: 506 SGIDTISSKFSDDCNNYENRISNISYELQVAKESVNEMSREKGQLQTDKNHLLEELQGKK 565

Query: 390 XXXXXXXXXVWELEAKVSKEGGEKLNLTKTVRKLEKKVGKLENNLKEKDEDLICLGEKKR 449
                    V +LEAK  KE  EK+N+T TV +L+K V +L+  +KEK+E ++ LGE+KR
Sbjct: 566 EEGSTLQKEVEKLEAKARKEESEKMNVTATVDELKKTVEELQKLIKEKEEGILDLGEEKR 625

Query: 450 EVIRQLCFVVDFHRDRCN 467
           E IRQLC ++D+HR+ CN
Sbjct: 626 EAIRQLCLLIDYHRE-CN 642


>Medtr8g099275.1 | COP1-interactive protein, putative | HC |
            chr8:41795509-41799598 | 20130731
          Length = 1223

 Score = 86.7 bits (213), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 120/489 (24%), Positives = 214/489 (43%), Gaps = 104/489 (21%)

Query: 67   QITQYQIQIENLEENVAETKSIEKGMVEQKEGFLARIKDLEHELETQSNQRNELEEELRS 126
            QI  +  QI+NL+ N+A+       + +Q+       K +E EL++  +Q++E+EE+LR+
Sbjct: 735  QIVAFGEQIKNLQLNLAQE------LAQQR-------KKMELELDSIRSQKSEVEEQLRA 781

Query: 127  VSYEMKQVEN---------------------ENKTLHDRNCDLEAAMAHKGDDMFGFLKK 165
               E+  +E                      EN  L D+    E  +A +  +      K
Sbjct: 782  KDRELNTLEQKESEYAKQISANRDEISKLAQENLELADKIDHSERRLATREFEFSTLQDK 841

Query: 166  HESHENEACVEATALKA-----------------ELEHQNERNQKEHAESLTKMETLNVK 208
                E EA  +  A  A                 ELE   +  ++EH E L  ++    +
Sbjct: 842  LYKAEEEASGKTIAFTAQVDNLQKDLLSLQKTKEELELCCDNIKEEHTEVLRMVDNEKNE 901

Query: 209  LETQIAEQEKIIKDQAATIDRISAEEKQAKIMLNRLKFNPRFAEKKMEELVEELR----- 263
            L  +  + ++ +++Q     +++ E KQ     N  K     AE+KMEE+ EE R     
Sbjct: 902  LAYKNMDLQRTLEEQEDAYQKLNEEYKQIDSWFNEWKVKLEVAERKMEEMAEEFREGIGS 961

Query: 264  ---------------------------------KKMEDSIRLLHQRIHVAEQLNNENKNS 290
                                             + +E  +RL +Q++ V EQL +E + S
Sbjct: 962  KDQMVTDLENQVEDLKRDLEEKGDEVSTLFENVRNLEVKLRLSNQKLRVTEQLLSEKEES 1021

Query: 291  CKMTKERYEEENKILGEKVACYEEKLRTRKEGVVEFEPNRFEL-----SVINGLNVAAEK 345
             +  +  +++  + L +++A     +    E    F      +     SVI+G++  + K
Sbjct: 1022 FRKAEREFQQVQRELEDRIATLVATITANNEA---FHETITSVKVCVNSVISGIDTLSRK 1078

Query: 346  VEEHSDFILSRVSKMLCEVESAKDWIKKRS---GEMKELKD----NVNXXXXXXXXXXXX 398
              + S    + +S +  E++ AK+ + K +   G+++  KD     +             
Sbjct: 1079 FSDESKNHENYISNISHELQVAKESVSKMNRVKGQLQRDKDCLLEELQGKKEGELTLREK 1138

Query: 399  VWELEAKVSKEGGEKLNLTKTVRKLEKKVGKLENNLKEKDEDLICLGEKKREVIRQLCFV 458
            V +LE K  KE  EK+N+T TV +L+K VG+LE ++KEK+E ++ LGE+KRE IRQLC  
Sbjct: 1139 VEKLEVKARKEESEKMNVTATVVELKKTVGELEKSMKEKEEGILDLGEEKREAIRQLCLW 1198

Query: 459  VDFHRDRCN 467
            +D+HR+  +
Sbjct: 1199 IDYHRESSD 1207


>Medtr8g099280.1 | myosin heavy chain-like protein, putative | LC |
           chr8:41803250-41805713 | 20130731
          Length = 546

 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 82/329 (24%), Positives = 156/329 (47%), Gaps = 54/329 (16%)

Query: 181 KAELEHQNERNQKEHAESLTKMETLNVKLETQIAEQEKIIKDQAATIDRISAEEKQAKIM 240
           K E+E   E+ +KEHA++L  ++    +L  +  + ++ + ++A     ++ E +Q   +
Sbjct: 216 KEEMELYYEKIRKEHAKTLAVVDNEKNELANKNMDLQRTLAERADAYQNLNKEYEQVNSL 275

Query: 241 LNRLKFNPRFAEKKME--------------ELVEELRKKMED------------------ 268
            N        AE+KME              ++V +L  ++ED                  
Sbjct: 276 FNEFFVKLEVAERKMEIMAEEFLQGIGSKDQMVADLEHQVEDLKKDLDKKGNNITFLLEN 335

Query: 269 ------SIRLLHQRIHVAEQLNNENKNSCKMTKERYEEENKILGEKVACYEEKLRTRKEG 322
                  +RL +Q I   EQL +E   S +  +E+++ + + L  +++  E  +    E 
Sbjct: 336 VENLGEKLRLSNQNIRDKEQLLSEKGESFRKAEEKFQHDQRALQIRISTAEATMAADNEA 395

Query: 323 VVEFEPNRFEL--SVINGLNVAAEKVEEHSDFILSRVSKMLCEVESAKDWIKKRSGEMKE 380
             E   +  E   SVI+G++  +    +    I +R+S    E++  K++I K + E ++
Sbjct: 396 FHETITSTKEWFNSVISGIDTVSLNFFDIHKNIENRISH---ELQVTKEYINKMNKEKRQ 452

Query: 381 LKDNVNXXXXXXXXXXXXVWELEAKVSKEG-GEKLNLTKTVRKLEKKVGKLENNLKEKDE 439
           L+ +              V     +  + G  EK+N+T  V +L+K+V +LE  ++EK+E
Sbjct: 453 LQTD----------KKPFVGGAAGQRQERGKSEKMNVTTIVVELKKRVEELEKLMEEKEE 502

Query: 440 DLICLGEKKREVIRQLCFVVDFHRDRCNY 468
            ++ LGE+KRE IRQLC  +D+HR+R +Y
Sbjct: 503 GMLNLGEEKREAIRQLCLRIDYHRERNDY 531