Miyakogusa Predicted Gene

Lj4g3v2991190.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2991190.2 Non Characterized Hit- tr|I1K6D9|I1K6D9_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,80.81,0,SUBFAMILY NOT
NAMED,NULL; F-BOX AND WD40 DOMAIN PROTEIN,NULL; seg,NULL; ARM
repeat,Armadillo-type fo,CUFF.51963.2
         (612 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g098950.2 | transducin/WD-like repeat-protein | HC | chr8:...  1025   0.0  
Medtr8g098950.1 | transducin/WD-like repeat-protein | HC | chr8:...   979   0.0  
Medtr8g098950.3 | transducin/WD-like repeat-protein | HC | chr8:...   511   e-144

>Medtr8g098950.2 | transducin/WD-like repeat-protein | HC |
            chr8:41470960-41462163 | 20130731
          Length = 1391

 Score = 1025 bits (2651), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 499/614 (81%), Positives = 546/614 (88%), Gaps = 2/614 (0%)

Query: 1    MFPGHMNYPSKVLWDGARGYIACLCQTHYGTSDGDVLYIWDVKTGSRERVLRGTAAHSMF 60
            MFPGH+NYPSKVLWDG RGYIACLCQTHYGTSDGD+LYIWDVKTGSRER++RGTAAHS+F
Sbjct: 647  MFPGHVNYPSKVLWDGTRGYIACLCQTHYGTSDGDILYIWDVKTGSRERLIRGTAAHSLF 706

Query: 61   DHFCKSISMNSISGSLLNGNTSVSSLLLPIVDDARLSNSSLXXXXXXXXXXXXXXXXXNM 120
            DHFCKSISMNSISGS+LNGNTSVSSLLLPIVDDARLSNS L                 +M
Sbjct: 707  DHFCKSISMNSISGSVLNGNTSVSSLLLPIVDDARLSNSPLNHTENLLTSSKSSPSISSM 766

Query: 121  TELRSSKANAGVENSSKPNSSSLFGLLSNKLPIKCSCPLPGVVSLSFDLASLMFSFKMNE 180
            TEL SSK NAG  NS+KP+SS LFGLLS+ LPIKC+CP PG+VSLSFDLASLMFSF+ NE
Sbjct: 767  TELNSSKPNAGKGNSAKPSSSYLFGLLSDNLPIKCTCPFPGIVSLSFDLASLMFSFQKNE 826

Query: 181  STQNGDGKPVNINLEQQGIPEQNPSHHNPETIEGRDWVSLFEEYLLRYSLSFLHLWSVDS 240
            S ++G+GKPVNINL+QQG+ EQNPSHHNPET EG +WVSLFEEYLLRYSLSFLHLW+VDS
Sbjct: 827  SMESGEGKPVNINLKQQGVQEQNPSHHNPETSEGHNWVSLFEEYLLRYSLSFLHLWNVDS 886

Query: 241  ELDNLLINDMKLRRPENFIVASGIQGDKGSLTLAFP--DATLELWKSSSEFCAMRSLTMV 298
            ELDNLLI+DMKLRRPENFI+ASG+QGDKGSLTL+FP   ATLELWKSSSEF AMRSLTMV
Sbjct: 887  ELDNLLISDMKLRRPENFILASGLQGDKGSLTLSFPGQSATLELWKSSSEFSAMRSLTMV 946

Query: 299  SLAQRLIXXXXXXXXXXXXXXXFYTRNFIENFPDLKPPSLQLLVAFWQDESEHVRMAARS 358
            SLAQRLI               FYTRNF+ENFPD+KPPSLQLLVAFWQDESEHVRMAARS
Sbjct: 947  SLAQRLISLSHSSSAASSALAAFYTRNFMENFPDMKPPSLQLLVAFWQDESEHVRMAARS 1006

Query: 359  IFHCAASHAIPLPLRNSKPIESTNMSSQVGSDNKHMGDMTVQSISPKEEKQGISQDEESK 418
            IFHCAASHAIPLPL NSKP ES N  SQ GS +KH+GD+ V+ ISPK EKQG+SQDEESK
Sbjct: 1007 IFHCAASHAIPLPLCNSKPSESINTISQTGSRDKHLGDVIVERISPKAEKQGMSQDEESK 1066

Query: 419  ILAWLESFEVQDWISCVGGTSQDAMRSHIVVASALSIWYPSLVKPSLATLVVHPLMKLAM 478
            IL WLES+EVQDWISCVGGTSQDAM SHI+VA+AL+IWYPSLVKP L+TLVVHPLMKLAM
Sbjct: 1067 ILTWLESYEVQDWISCVGGTSQDAMTSHIIVAAALAIWYPSLVKPRLSTLVVHPLMKLAM 1126

Query: 479  AMSEKYSSTAAELLSEGMEGTWKECIASEIPHLIGDIFFQVELSGPSSKSMTEVPVASFA 538
            +M+EKYSSTAAELL+EGME TWKEC+ SEIP LIGDIFFQVELSGPSSKS+TE+P ASF+
Sbjct: 1127 SMNEKYSSTAAELLAEGMESTWKECMVSEIPRLIGDIFFQVELSGPSSKSLTEIPPASFS 1186

Query: 539  IKKTLVEVLLPSLAMADIPGFLTVIESQIWSTASDSPVHLVSLLTLIRIMRGSPRNLAQY 598
            IK+TLVEVLLPSLAMADIPGFLTVIESQIWSTASDSPVH+VSLLTLIRIMRGSPR LAQY
Sbjct: 1187 IKQTLVEVLLPSLAMADIPGFLTVIESQIWSTASDSPVHMVSLLTLIRIMRGSPRYLAQY 1246

Query: 599  LDKVVNYILQTLDP 612
            LDKVVN+ILQT+DP
Sbjct: 1247 LDKVVNFILQTIDP 1260


>Medtr8g098950.1 | transducin/WD-like repeat-protein | HC |
            chr8:41470868-41460058 | 20130731
          Length = 1442

 Score =  979 bits (2532), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 480/614 (78%), Positives = 528/614 (85%), Gaps = 35/614 (5%)

Query: 1    MFPGHMNYPSKVLWDGARGYIACLCQTHYGTSDGDVLYIWDVKTGSRERVLRGTAAHSMF 60
            MFPGH+NYPSKVLWDG RGYIACLCQTHYGTSDGD+LYIWDVKTGSRER++RGTAAHS+F
Sbjct: 647  MFPGHVNYPSKVLWDGTRGYIACLCQTHYGTSDGDILYIWDVKTGSRERLIRGTAAHSLF 706

Query: 61   DHFCKSISMNSISGSLLNGNTSVSSLLLPIVDDARLSNSSLXXXXXXXXXXXXXXXXXNM 120
            DHFCKSISMNSISGS+LNGNTSVSSLLLPI                              
Sbjct: 707  DHFCKSISMNSISGSVLNGNTSVSSLLLPI------------------------------ 736

Query: 121  TELRSSKANAGVENSSKPNSSSLFGLLSNKLPIKCSCPLPGVVSLSFDLASLMFSFKMNE 180
               R+   +    NS+KP+SS LFGLLS+ LPIKC+CP PG+VSLSFDLASLMFSF+ NE
Sbjct: 737  ---RTCLLHQSKGNSAKPSSSYLFGLLSDNLPIKCTCPFPGIVSLSFDLASLMFSFQKNE 793

Query: 181  STQNGDGKPVNINLEQQGIPEQNPSHHNPETIEGRDWVSLFEEYLLRYSLSFLHLWSVDS 240
            S ++G+GKPVNINL+QQG+ EQNPSHHNPET EG +WVSLFEEYLLRYSLSFLHLW+VDS
Sbjct: 794  SMESGEGKPVNINLKQQGVQEQNPSHHNPETSEGHNWVSLFEEYLLRYSLSFLHLWNVDS 853

Query: 241  ELDNLLINDMKLRRPENFIVASGIQGDKGSLTLAFP--DATLELWKSSSEFCAMRSLTMV 298
            ELDNLLI+DMKLRRPENFI+ASG+QGDKGSLTL+FP   ATLELWKSSSEF AMRSLTMV
Sbjct: 854  ELDNLLISDMKLRRPENFILASGLQGDKGSLTLSFPGQSATLELWKSSSEFSAMRSLTMV 913

Query: 299  SLAQRLIXXXXXXXXXXXXXXXFYTRNFIENFPDLKPPSLQLLVAFWQDESEHVRMAARS 358
            SLAQRLI               FYTRNF+ENFPD+KPPSLQLLVAFWQDESEHVRMAARS
Sbjct: 914  SLAQRLISLSHSSSAASSALAAFYTRNFMENFPDMKPPSLQLLVAFWQDESEHVRMAARS 973

Query: 359  IFHCAASHAIPLPLRNSKPIESTNMSSQVGSDNKHMGDMTVQSISPKEEKQGISQDEESK 418
            IFHCAASHAIPLPL NSKP ES N  SQ GS +KH+GD+ V+ ISPK EKQG+SQDEESK
Sbjct: 974  IFHCAASHAIPLPLCNSKPSESINTISQTGSRDKHLGDVIVERISPKAEKQGMSQDEESK 1033

Query: 419  ILAWLESFEVQDWISCVGGTSQDAMRSHIVVASALSIWYPSLVKPSLATLVVHPLMKLAM 478
            IL WLES+EVQDWISCVGGTSQDAM SHI+VA+AL+IWYPSLVKP L+TLVVHPLMKLAM
Sbjct: 1034 ILTWLESYEVQDWISCVGGTSQDAMTSHIIVAAALAIWYPSLVKPRLSTLVVHPLMKLAM 1093

Query: 479  AMSEKYSSTAAELLSEGMEGTWKECIASEIPHLIGDIFFQVELSGPSSKSMTEVPVASFA 538
            +M+EKYSSTAAELL+EGME TWKEC+ SEIP LIGDIFFQVELSGPSSKS+TE+P ASF+
Sbjct: 1094 SMNEKYSSTAAELLAEGMESTWKECMVSEIPRLIGDIFFQVELSGPSSKSLTEIPPASFS 1153

Query: 539  IKKTLVEVLLPSLAMADIPGFLTVIESQIWSTASDSPVHLVSLLTLIRIMRGSPRNLAQY 598
            IK+TLVEVLLPSLAMADIPGFLTVIESQIWSTASDSPVH+VSLLTLIRIMRGSPR LAQY
Sbjct: 1154 IKQTLVEVLLPSLAMADIPGFLTVIESQIWSTASDSPVHMVSLLTLIRIMRGSPRYLAQY 1213

Query: 599  LDKVVNYILQTLDP 612
            LDKVVN+ILQT+DP
Sbjct: 1214 LDKVVNFILQTIDP 1227


>Medtr8g098950.3 | transducin/WD-like repeat-protein | HC |
           chr8:41470985-41466579 | 20130731
          Length = 1015

 Score =  511 bits (1315), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 248/307 (80%), Positives = 272/307 (88%), Gaps = 2/307 (0%)

Query: 1   MFPGHMNYPSKVLWDGARGYIACLCQTHYGTSDGDVLYIWDVKTGSRERVLRGTAAHSMF 60
           MFPGH+NYPSKVLWDG RGYIACLCQTHYGTSDGD+LYIWDVKTGSRER++RGTAAHS+F
Sbjct: 647 MFPGHVNYPSKVLWDGTRGYIACLCQTHYGTSDGDILYIWDVKTGSRERLIRGTAAHSLF 706

Query: 61  DHFCKSISMNSISGSLLNGNTSVSSLLLPIVDDARLSNSSLXXXXXXXXXXXXXXXXXNM 120
           DHFCKSISMNSISGS+LNGNTSVSSLLLPIVDDARLSNS L                 +M
Sbjct: 707 DHFCKSISMNSISGSVLNGNTSVSSLLLPIVDDARLSNSPLNHTENLLTSSKSSPSISSM 766

Query: 121 TELRSSKANAGVENSSKPNSSSLFGLLSNKLPIKCSCPLPGVVSLSFDLASLMFSFKMNE 180
           TEL SSK NAG  NS+KP+SS LFGLLS+ LPIKC+CP PG+VSLSFDLASLMFSF+ NE
Sbjct: 767 TELNSSKPNAGKGNSAKPSSSYLFGLLSDNLPIKCTCPFPGIVSLSFDLASLMFSFQKNE 826

Query: 181 STQNGDGKPVNINLEQQGIPEQNPSHHNPETIEGRDWVSLFEEYLLRYSLSFLHLWSVDS 240
           S ++G+GKPVNINL+QQG+ EQNPSHHNPET EG +WVSLFEEYLLRYSLSFLHLW+VDS
Sbjct: 827 SMESGEGKPVNINLKQQGVQEQNPSHHNPETSEGHNWVSLFEEYLLRYSLSFLHLWNVDS 886

Query: 241 ELDNLLINDMKLRRPENFIVASGIQGDKGSLTLAFP--DATLELWKSSSEFCAMRSLTMV 298
           ELDNLLI+DMKLRRPENFI+ASG+QGDKGSLTL+FP   ATLELWKSSSEF AMRSLTMV
Sbjct: 887 ELDNLLISDMKLRRPENFILASGLQGDKGSLTLSFPGQSATLELWKSSSEFSAMRSLTMV 946

Query: 299 SLAQRLI 305
           SLAQRLI
Sbjct: 947 SLAQRLI 953