Miyakogusa Predicted Gene

Lj4g3v2963440.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2963440.1 Non Characterized Hit- tr|I3SU43|I3SU43_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2 SV,88.01,0,GMP
SYNTHASE,NULL; GMP SYNTHASE-RELATED,NULL; GATASE,NULL;
ANTSNTHASEII,NULL; GMP_synthase,GMP synth,CUFF.51928.1
         (534 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g098325.1 | GMP synthase [glutamine-hydrolyzing] protein |...   998   0.0  
Medtr4g103830.2 | carbamoylphosphate synthase small subunit | HC...    54   5e-07
Medtr4g103830.1 | carbamoylphosphate synthase small subunit | HC...    54   5e-07

>Medtr8g098325.1 | GMP synthase [glutamine-hydrolyzing] protein | HC
           | chr8:41021124-41017935 | 20130731
          Length = 536

 Score =  998 bits (2581), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 472/534 (88%), Positives = 513/534 (96%)

Query: 1   MEPKAVKSDLVLILDFGSQYTHLITRRIRSLSVFSLCISGTSSLSAISELNPSVVILSGG 60
           ++PK VKSDLVLILDFGSQYTHLITRRIRSLSVFSLC++GTSSL +I+ELNPS+VILSGG
Sbjct: 3   IDPKQVKSDLVLILDFGSQYTHLITRRIRSLSVFSLCLNGTSSLQSITELNPSLVILSGG 62

Query: 61  PHSVHTPDSPSFPDGFLDWARTNGVAVLGICYGLQLLVQRLGGDVRVGHTQEYGRMEITV 120
           PHSVHTPDSPSFPDGFL WA++N V VLGICYGLQLLV RLGG+VRVG+TQEYGRMEI V
Sbjct: 63  PHSVHTPDSPSFPDGFLQWAQSNAVPVLGICYGLQLLVSRLGGEVRVGNTQEYGRMEIKV 122

Query: 121 EHPSALFPSYKVGHKQVVWMSHGDEAAALPPGFNVVARSQQGSVAAIENPSSKFYGLQYH 180
           E+ SALFP  KVGH Q+VWMSHGDEA  LP GFNVVARSQQG+VAAI+NPS+KFYGLQYH
Sbjct: 123 ENASALFPVEKVGHSQLVWMSHGDEAVTLPSGFNVVARSQQGAVAAIQNPSAKFYGLQYH 182

Query: 181 PEVTHTPEGMETLRHFLFEVCGVAAGWKMEDLLEEEVKVINNTVGPDEHVICALSGGVDS 240
           PEVTHTPEGMETL+HFLF+VCG++AGWKMED+LEEE+KVINNTVGPDEHVICALSGGVDS
Sbjct: 183 PEVTHTPEGMETLKHFLFDVCGISAGWKMEDVLEEEIKVINNTVGPDEHVICALSGGVDS 242

Query: 241 TVAATLVHRAIGDRLHCVFVDNGLLRYKEQERVMETFEKDLHLPVVCVDAANQFLSELKG 300
           TVAAT+VH+AIGDRLHCVFVDNGLLRYKEQERVMETF+KDLHLPV CVDAA+QFL++LKG
Sbjct: 243 TVAATIVHKAIGDRLHCVFVDNGLLRYKEQERVMETFKKDLHLPVECVDAADQFLTKLKG 302

Query: 301 VTDPEQKRKIIGKEFIAIFDAFAHELEQKIGKKPTYLVQGTLYPDVIESCPPPGSGRTHS 360
           VTDPE KRKIIGKEFI IFDAFA +LE+++G +P+YLVQGTLYPDVIESCPPPGSG+THS
Sbjct: 303 VTDPEVKRKIIGKEFICIFDAFAQKLEKELGSRPSYLVQGTLYPDVIESCPPPGSGKTHS 362

Query: 361 HTIKSHHNVGGLPKDMKLKLIEPLKLLFKDEVRQLGKILDVPEGFLKRHPFPGPGLAVRV 420
           HTIKSHHNVGGLPKDMKLKLIEPLKLLFKDEVRQLG+I+DVPEGFLKRHPFPGPGLAVRV
Sbjct: 363 HTIKSHHNVGGLPKDMKLKLIEPLKLLFKDEVRQLGRIMDVPEGFLKRHPFPGPGLAVRV 422

Query: 421 LGDVTQGNALDILRQVDEIFIQSIKEAGLYDSIWQAFAVFLPVRSVGVQGDQRTHSHVVA 480
           LGDVT+GNALD+LRQVDEIFIQSIK+AGLYD IWQAFAVFLPVRSVGVQGDQRTHSHVVA
Sbjct: 423 LGDVTEGNALDVLRQVDEIFIQSIKDAGLYDVIWQAFAVFLPVRSVGVQGDQRTHSHVVA 482

Query: 481 LRAVTSQDGMTADWYNFEHKFLDDVARKICNGVRGVNRVVQDITSKPPSTIEWE 534
           LRAVTSQDGMTADWY FEHKFLDDV+RKICNGVRGVNRVVQDITSKPPSTIEWE
Sbjct: 483 LRAVTSQDGMTADWYYFEHKFLDDVSRKICNGVRGVNRVVQDITSKPPSTIEWE 536


>Medtr4g103830.2 | carbamoylphosphate synthase small subunit | HC |
           chr4:42961284-42966289 | 20130731
          Length = 408

 Score = 53.5 bits (127), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 58/190 (30%), Positives = 75/190 (39%), Gaps = 37/190 (19%)

Query: 11  VLILDFGSQYTHLITRRIRSLSVFSLCISGTSSLSAISELNPSVVILSGGPHSVHTPDSP 70
           V+  DFG +  H I RR+ S       +  T   S   +LNP  V+ S GP      D  
Sbjct: 234 VVAYDFGIK--HNILRRLASYGCKITVVPSTWPASETLKLNPDGVLFSNGPG-----DPS 286

Query: 71  SFPDGFLDWARTNG-VAVLGICYGLQLLVQRLGG---DVRVGH--------TQEYGRMEI 118
           + P          G V V GIC G QLL Q LGG    ++ GH            GR+EI
Sbjct: 287 AVPYAVETVKNIIGKVPVFGICMGHQLLGQALGGTTYKMKFGHHGGNHPVRNLRTGRVEI 346

Query: 119 TVEHPSALFPSYKVGHKQVVWMSHGDEAAALPPGFNVV-ARSQQGSVAAIENPSSKFYGL 177
           + ++           H   V      + A LP G  V        S A +  P+ K   L
Sbjct: 347 SSQN-----------HNYAV------DPATLPKGVEVTHINLNDSSCAGLAFPARKVVSL 389

Query: 178 QYHPEVTHTP 187
           QYHPE +  P
Sbjct: 390 QYHPEASPGP 399


>Medtr4g103830.1 | carbamoylphosphate synthase small subunit | HC |
           chr4:42961284-42966551 | 20130731
          Length = 431

 Score = 53.5 bits (127), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 58/190 (30%), Positives = 75/190 (39%), Gaps = 37/190 (19%)

Query: 11  VLILDFGSQYTHLITRRIRSLSVFSLCISGTSSLSAISELNPSVVILSGGPHSVHTPDSP 70
           V+  DFG +  H I RR+ S       +  T   S   +LNP  V+ S GP      D  
Sbjct: 234 VVAYDFGIK--HNILRRLASYGCKITVVPSTWPASETLKLNPDGVLFSNGPG-----DPS 286

Query: 71  SFPDGFLDWARTNG-VAVLGICYGLQLLVQRLGG---DVRVGH--------TQEYGRMEI 118
           + P          G V V GIC G QLL Q LGG    ++ GH            GR+EI
Sbjct: 287 AVPYAVETVKNIIGKVPVFGICMGHQLLGQALGGTTYKMKFGHHGGNHPVRNLRTGRVEI 346

Query: 119 TVEHPSALFPSYKVGHKQVVWMSHGDEAAALPPGFNVV-ARSQQGSVAAIENPSSKFYGL 177
           + ++           H   V      + A LP G  V        S A +  P+ K   L
Sbjct: 347 SSQN-----------HNYAV------DPATLPKGVEVTHINLNDSSCAGLAFPARKVVSL 389

Query: 178 QYHPEVTHTP 187
           QYHPE +  P
Sbjct: 390 QYHPEASPGP 399