Miyakogusa Predicted Gene

Lj4g3v2962380.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2962380.1 Non Characterized Hit- tr|D7M4M1|D7M4M1_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,59.41,2e-18,seg,NULL; ENOD93,Early nodulin 93 ENOD93 protein;
Q9SBR6_MEDVA_Q9SBR6;,Early nodulin 93 ENOD93 prote,CUFF.51919.1
         (120 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g007360.1 | early nodulin 93 | HC | chr1:305370-301574 | 2...   158   1e-39
Medtr3g110390.1 | early nodulin 93 | HC | chr3:51579779-51577895...   138   1e-33
Medtr3g110390.2 | early nodulin 93 | HC | chr3:51579731-51577943...   132   9e-32
Medtr4g113820.1 | early nodulin 93 | HC | chr4:46845878-46846953...    62   1e-10

>Medtr1g007360.1 | early nodulin 93 | HC | chr1:305370-301574 |
           20130731
          Length = 120

 Score =  158 bits (399), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 77/120 (64%), Positives = 88/120 (73%), Gaps = 1/120 (0%)

Query: 1   MGIPSELRDMWVSKSKTPFLIASPAEESKLLRSKQCTNEGVRAGFKAATIACVSSAVPTL 60
           MGIPSELRD WVSK +  F+IASP EE K+LR+K+CTNEGVRAGFKAA +ACV S VPTL
Sbjct: 1   MGIPSELRDAWVSK-RNSFIIASPDEERKILRTKKCTNEGVRAGFKAAAVACVVSTVPTL 59

Query: 61  AAVRIIPWAKANLNYTXXXXXXXXXXXXXXXXXXDKTILECARKNARLQDSLRHDNKVAS 120
           AAVR++PWAKANLNYT                  DKTILECARKNA+L++SLRH     S
Sbjct: 60  AAVRMVPWAKANLNYTAQALIISAASIAAYFITADKTILECARKNAQLENSLRHHRDTVS 119


>Medtr3g110390.1 | early nodulin 93 | HC | chr3:51579779-51577895 |
           20130731
          Length = 122

 Score =  138 bits (348), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 68/116 (58%), Positives = 78/116 (67%), Gaps = 1/116 (0%)

Query: 1   MGIPSELRDMWVSKSKTPFLIASPAEESKLLRSKQCTNEGVRAGFKAATIACVSSAVPTL 60
           MGIPSELRDMW++   T   IASPAEE K+LRS QCT EGVRAGFKAA I CV+S  PTL
Sbjct: 1   MGIPSELRDMWIANKNTSLQIASPAEEQKMLRSSQCTAEGVRAGFKAAGIGCVTSTGPTL 60

Query: 61  AAVRIIPWAKANLNYTXXXXXXXXXXXXXXXXXXDKTILECARKNA-RLQDSLRHD 115
            AVR+IPWAKANLNYT                  DK IL CARK +  L++SL+ +
Sbjct: 61  VAVRMIPWAKANLNYTAQALIISAVSVASFFVAADKIILACARKQSLLLEESLKQE 116


>Medtr3g110390.2 | early nodulin 93 | HC | chr3:51579731-51577943 |
           20130731
          Length = 121

 Score =  132 bits (331), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 67/116 (57%), Positives = 77/116 (66%), Gaps = 2/116 (1%)

Query: 1   MGIPSELRDMWVSKSKTPFLIASPAEESKLLRSKQCTNEGVRAGFKAATIACVSSAVPTL 60
           MGIPSELRDMW++   T   IASPAEE K+LRS QCT  GVRAGFKAA I CV+S  PTL
Sbjct: 1   MGIPSELRDMWIANKNTSLQIASPAEEQKMLRSSQCT-AGVRAGFKAAGIGCVTSTGPTL 59

Query: 61  AAVRIIPWAKANLNYTXXXXXXXXXXXXXXXXXXDKTILECARKNA-RLQDSLRHD 115
            AVR+IPWAKANLNYT                  DK IL CARK +  L++SL+ +
Sbjct: 60  VAVRMIPWAKANLNYTAQALIISAVSVASFFVAADKIILACARKQSLLLEESLKQE 115


>Medtr4g113820.1 | early nodulin 93 | HC | chr4:46845878-46846953 |
           20130731
          Length = 107

 Score = 62.0 bits (149), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 35/80 (43%), Positives = 52/80 (65%)

Query: 27  ESKLLRSKQCTNEGVRAGFKAATIACVSSAVPTLAAVRIIPWAKANLNYTXXXXXXXXXX 86
           + +L  +K+C++EGV AG KAA +A +++A+PTLA+VR++PWA+ANLN T          
Sbjct: 21  DQRLAMAKRCSHEGVMAGAKAAVVATIATAIPTLASVRMLPWARANLNPTAQALIISTVA 80

Query: 87  XXXXXXXXDKTILECARKNA 106
                   DKT+L  ARKN+
Sbjct: 81  GAAYFVVADKTVLATARKNS 100