Miyakogusa Predicted Gene

Lj4g3v2951170.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2951170.2 Non Characterized Hit- tr|I1K6K2|I1K6K2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.22404
PE,89.25,0,DEHYDRATASE_SER_THR,Serine/threonine dehydratase,
pyridoxal-phosphate-binding site; Tryptophan synth,CUFF.51903.2
         (335 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g098460.1 | serine/threonine dehydratase serine racemase |...   602   e-172
Medtr7g103510.1 | serine/threonine dehydratase serine racemase |...   522   e-148
Medtr1g056740.1 | pyridoxal-5'-phosphate-dependent enzyme family...   267   8e-72
Medtr1g061800.1 | threonine dehydratase biosynthetic protein | H...   111   1e-24
Medtr0681s0020.1 | taurine catabolism dioxygenase TauD/TfdA | LC...   103   2e-22

>Medtr8g098460.1 | serine/threonine dehydratase serine racemase | HC
           | chr8:40869845-40867057 | 20130731
          Length = 333

 Score =  602 bits (1553), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 291/333 (87%), Positives = 309/333 (92%)

Query: 1   MEEDSQITKGKYAADISSIKEAHDRIKSQVLITPVLSSASLNAISGRQLYLKCECFQKGG 60
           MEE+SQI KG+YAADISSI EAH RIKS +L TPVLSS SLNAISGRQLY KCE FQKGG
Sbjct: 1   MEEESQIPKGRYAADISSINEAHARIKSLILKTPVLSSTSLNAISGRQLYFKCESFQKGG 60

Query: 61  AFKFRGACNAVFSLNDEDASKGVITHSSGNHXXXXXXXXKLRGIPAYIVIPKNAPTCKVE 120
           AFKFRGACNAVFSLNDEDASKGVITHSSGNH        KLRGIPAYIVIPKNAPTCK+E
Sbjct: 61  AFKFRGACNAVFSLNDEDASKGVITHSSGNHAAALALAAKLRGIPAYIVIPKNAPTCKIE 120

Query: 121 NVKRYGGQVIWSDASMQSREDTAKKVLQETGAILIHPYNDGRILSGQGTISLEFLEQVPH 180
           NVKRYGGQVIWS+A+M+SRE+TA KV QETGAI IHPYNDGRILSGQGTISLE LEQ P 
Sbjct: 121 NVKRYGGQVIWSEANMRSREETANKVWQETGAIFIHPYNDGRILSGQGTISLELLEQAPQ 180

Query: 181 IDTLVVPISGGGLISGVALAAKSINPAIRILAAEPKGADDAAQSKAAGRIITLPETNTIA 240
           +DTLVVPISGGGLISGVALAAKSINPAIRILAAEPKGADDAAQSKAAGRIITLPETNTIA
Sbjct: 181 LDTLVVPISGGGLISGVALAAKSINPAIRILAAEPKGADDAAQSKAAGRIITLPETNTIA 240

Query: 241 DGLRAFLGDFTWPVVRDLVEDIITVDDSEIIKAMKLCFEILKVVVEPSGAIGLAAVLSDT 300
           DGLRAFLGDFTWPVVRDLV+DIITV+DSEI+KAM+LC+EILK+VVEPSGAIGLAAVLS++
Sbjct: 241 DGLRAFLGDFTWPVVRDLVDDIITVEDSEIVKAMQLCYEILKIVVEPSGAIGLAAVLSES 300

Query: 301 FQKNPAWKDCNHIGIVVSGGNVDLAVLWDSFNK 333
           FQKNPAWKDC HIGIVVSGGNVD+AVLWDS NK
Sbjct: 301 FQKNPAWKDCKHIGIVVSGGNVDMAVLWDSLNK 333


>Medtr7g103510.1 | serine/threonine dehydratase serine racemase | HC
           | chr7:41875026-41876797 | 20130731
          Length = 329

 Score =  522 bits (1345), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 258/329 (78%), Positives = 284/329 (86%)

Query: 7   ITKGKYAADISSIKEAHDRIKSQVLITPVLSSASLNAISGRQLYLKCECFQKGGAFKFRG 66
           +T GKYAADISSIKEAH RIKS +  TPVLSS SLN IS R+LY KCE FQK GAFKFRG
Sbjct: 1   MTMGKYAADISSIKEAHARIKSLIRKTPVLSSNSLNDISRRKLYFKCENFQKSGAFKFRG 60

Query: 67  ACNAVFSLNDEDASKGVITHSSGNHXXXXXXXXKLRGIPAYIVIPKNAPTCKVENVKRYG 126
           ACNAVFSL DEDASKGVITHSSGNH        KLRGIPAY+V PKN P CK+ENVKRY 
Sbjct: 61  ACNAVFSLTDEDASKGVITHSSGNHAAALALAAKLRGIPAYVVTPKNVPICKLENVKRYD 120

Query: 127 GQVIWSDASMQSREDTAKKVLQETGAILIHPYNDGRILSGQGTISLEFLEQVPHIDTLVV 186
           G+V +S+A+++SR++ A  + QETGAI I   NDGRILSGQGTISLE LEQ P IDTLVV
Sbjct: 121 GKVNFSEANIRSRDEVAYILRQETGAIFIPSSNDGRILSGQGTISLELLEQAPQIDTLVV 180

Query: 187 PISGGGLISGVALAAKSINPAIRILAAEPKGADDAAQSKAAGRIITLPETNTIADGLRAF 246
           PISGGG+ SGVALAAK+INP+IRILAAEPKGADDAAQSKAAGRIITLPE NTIADGLRA 
Sbjct: 181 PISGGGMASGVALAAKAINPSIRILAAEPKGADDAAQSKAAGRIITLPEVNTIADGLRAC 240

Query: 247 LGDFTWPVVRDLVEDIITVDDSEIIKAMKLCFEILKVVVEPSGAIGLAAVLSDTFQKNPA 306
           LG+FTWPVVRDLV+DIITV+DSEI+KAMKLCFEILK+VVEPSGAIGLAAVLS TFQKN A
Sbjct: 241 LGNFTWPVVRDLVDDIITVEDSEIVKAMKLCFEILKIVVEPSGAIGLAAVLSKTFQKNDA 300

Query: 307 WKDCNHIGIVVSGGNVDLAVLWDSFNKAK 335
           WKD  HIGIV+SGGNVD+AVLW+  NK+K
Sbjct: 301 WKDSKHIGIVISGGNVDMAVLWNYLNKSK 329


>Medtr1g056740.1 | pyridoxal-5'-phosphate-dependent enzyme family
           protein | HC | chr1:24818642-24817514 | 20130731
          Length = 201

 Score =  267 bits (683), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 129/180 (71%), Positives = 146/180 (81%)

Query: 11  KYAADISSIKEAHDRIKSQVLITPVLSSASLNAISGRQLYLKCECFQKGGAFKFRGACNA 70
           KYAADISS+KEA+DRIKS V  TPVLSS SL+ ISGR+LY KCE FQK GAFKFRGACNA
Sbjct: 7   KYAADISSVKEAYDRIKSLVHRTPVLSSTSLDDISGRKLYFKCENFQKSGAFKFRGACNA 66

Query: 71  VFSLNDEDASKGVITHSSGNHXXXXXXXXKLRGIPAYIVIPKNAPTCKVENVKRYGGQVI 130
           V SL DE+ASKGV THSSGNH        K+RGIPA+IV+PK+AP+CKVEN+KRY G V 
Sbjct: 67  VLSLTDEEASKGVTTHSSGNHAAALSLAAKIRGIPAFIVVPKSAPSCKVENIKRYDGNVN 126

Query: 131 WSDASMQSREDTAKKVLQETGAILIHPYNDGRILSGQGTISLEFLEQVPHIDTLVVPISG 190
            ++ +MQSRE+   KV QET AI I   NDGRI+SGQGTISLEFLEQ+P IDTLVVPISG
Sbjct: 127 LAEDNMQSREEVMNKVRQETSAIYIPSSNDGRIMSGQGTISLEFLEQIPQIDTLVVPISG 186


>Medtr1g061800.1 | threonine dehydratase biosynthetic protein | HC |
           chr1:26989019-26984252 | 20130731
          Length = 605

 Score =  111 bits (277), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 88/288 (30%), Positives = 144/288 (50%), Gaps = 7/288 (2%)

Query: 2   EEDSQITKGKYAADISSIKEAHDRIKSQVLITPVLSSASLNAISGRQLYLKCECFQKGGA 61
           E+D  ++   Y   I + K     ++S + + P LS        G  ++LK E  Q   +
Sbjct: 98  EDDCGVSAMGYLTSILTSKVYDVAVESPLELAPKLSERL-----GVNVWLKREDLQPVFS 152

Query: 62  FKFRGACNAVFSLNDEDASKGVITHSSGNHXXXXXXXXKLRGIPAYIVIPKNAPTCKVEN 121
           FK RGA N +  L  +   KGVI  S+GNH        K     A I +P   P  K ++
Sbjct: 153 FKIRGAYNMMAKLPKDVLEKGVICSSAGNHAQGVAMSAKRLNCSAVIAMPVTTPDIKWKS 212

Query: 122 VKRYGGQVIWSDASMQSREDTAKKVLQETGAILIHPYNDGRILSGQGTISLEFLEQVPH- 180
           V+R+G  V+    S    +  AKK   E G   I P++   ++ GQGT+ +E + Q+   
Sbjct: 213 VERWGATVVLIGDSYDEAQAYAKKRAIEDGRTFIPPFDHPDVIMGQGTVGMEIVRQMKRP 272

Query: 181 IDTLVVPISGGGLISGVALAAKSINPAIRILAAEPKGADDAAQSKAAGRIITLPETNTIA 240
           +  + VP+ GGGLI+G+A   K INP ++I+  EP  A+  A S   G+ + L +    A
Sbjct: 273 VHAIFVPVGGGGLIAGIAAYVKRINPEVKIIGVEPTDANALALSLHHGQRVVLDQVGGFA 332

Query: 241 DGLRA-FLGDFTWPVVRDLVEDIITVDDSEIIKAMKLCFEILKVVVEP 287
           DG+    +G+ T+ + ++LV+ ++ V    I  ++K  FE  + ++EP
Sbjct: 333 DGVAVKEVGEETFRLCKELVDGVVLVSRDAICASIKDMFEEKRSILEP 380


>Medtr0681s0020.1 | taurine catabolism dioxygenase TauD/TfdA | LC |
           scaffold0681:7877-2271 | 20130731
          Length = 1786

 Score =  103 bits (258), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 91/307 (29%), Positives = 144/307 (46%), Gaps = 10/307 (3%)

Query: 18  SIKEAHDRIKSQVLITPVLSSASLNAISGRQLYLKCECFQKGGAFKFRGACNAVFSLNDE 77
           S+++A   I+ + + TPV     L  + G  +Y K E  Q  G+FK+RGA  A+      
Sbjct: 16  SLEDAMQLIRGKAVSTPVKQLPWLEKLVGVPVYAKMEFHQHTGSFKYRGALCAL----AH 71

Query: 78  DASKGVITHSSGNHXXXXXXXXKLRGIPAYIVIPKNAPTCKVENVKRYGGQVIWSDASMQ 137
             S  +I  S+GNH        K  GI A IV+P NA   K + +     +++    S+ 
Sbjct: 72  RRSDVIIAASAGNHGVAVATVAKALGIKAKIVLPANASRLKRDKLSYLDAEILEYGDSLG 131

Query: 138 SREDTAKKVLQETGAILIHPYNDGRILSGQGTISLEFLEQVPHIDTLVVPISGGGLISGV 197
                A+ +    G   I  +ND R++SG  T++ E L Q P   TL+VP+ GGGL+ G 
Sbjct: 132 DAGRYARSLAATYGWDYISAFNDRRVISGNATLTAEVLAQTPDARTLIVPVGGGGLLLGA 191

Query: 198 ALAAKSINPAIRILAAEPKGADDAAQSKAAGRIITLPETNTIADGLRAFLGDFTWPVVRD 257
             A   +   +R+  AEP+     +Q     R   +    T ADGL   L D    ++  
Sbjct: 192 IQAKDQLGHPVRLHGAEPENYASVSQGLGLARAQRVVNQPTFADGLAVQLTDEENSLLEL 251

Query: 258 LVE--DIITVDDSEIIKAMKLCFEILKVVVEPSGAIGLAAVLSDTFQKNPAWKDCNHIGI 315
           +    +I T+ + +I        +    +VEPSGAI +AA+L    ++ P       + +
Sbjct: 252 MSARVEIDTLTEEQIAMGTVSLLQKESWLVEPSGAICVAALLK-LAERGPL---DGPVVL 307

Query: 316 VVSGGNV 322
           ++SGGNV
Sbjct: 308 LLSGGNV 314