Miyakogusa Predicted Gene

Lj4g3v2950000.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2950000.1 Non Characterized Hit- tr|Q84VD8|Q84VD8_ORYSJ
Putative myosin OS=Oryza sativa subsp. japonica PE=2
S,39.58,5e-19,NT-C2,EEIG1/EHBP1 N-terminal domain; seg,NULL; SUBFAMILY
NOT NAMED,NULL; FAMILY NOT NAMED,NULL,CUFF.52077.1
         (242 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g097350.1 | myosin heavy chain-like protein | HC | chr8:40...   354   5e-98
Medtr8g097350.2 | myosin heavy chain-like protein | HC | chr8:40...   348   3e-96
Medtr5g010520.1 | myosin heavy chain-like protein | HC | chr5:28...   266   9e-72
Medtr5g010520.2 | myosin heavy chain-like protein | HC | chr5:28...   266   1e-71
Medtr1g100633.2 | myosin heavy chain-like protein | HC | chr1:45...   149   2e-36
Medtr1g100633.1 | myosin heavy chain-like protein | HC | chr1:45...   149   2e-36
Medtr1g100633.3 | myosin heavy chain-like protein | HC | chr1:45...   149   2e-36
Medtr3g073620.1 | myosin heavy chain-like protein, putative | HC...   145   4e-35
Medtr1g062200.1 | myosin heavy chain-like protein, putative | HC...    63   3e-10
Medtr1g062200.2 | myosin heavy chain-like protein, putative | HC...    62   3e-10
Medtr1g090807.1 | myosin heavy chain-like protein, putative | HC...    53   3e-07

>Medtr8g097350.1 | myosin heavy chain-like protein | HC |
           chr8:40796895-40801958 | 20130731
          Length = 1032

 Score =  354 bits (908), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 175/238 (73%), Positives = 190/238 (79%), Gaps = 3/238 (1%)

Query: 1   MFRWRNDKNRVKAVFKLHFHVT--QVLQPGVDSLVLSIVPGDIGKVTTRLEKALVRGGVC 58
           MFRWR+DKN+VKAVFKLHFH+T  QVLQ GVDSLVLSIVPGD GK TTRLEKA+V  G C
Sbjct: 1   MFRWRSDKNKVKAVFKLHFHLTLTQVLQSGVDSLVLSIVPGDNGKPTTRLEKAIVHDGNC 60

Query: 59  RWENPVYETVKFIQDPKTGKFSERVYYFVVSTGLSKGSSFGEVSVDFASYADATKLSSVS 118
           +WENPVYE VKF QDPK GKFSE+VYYFV+STGLSK S FGEVS+DFA YA+ATK+SSVS
Sbjct: 61  KWENPVYEAVKFNQDPKNGKFSEKVYYFVISTGLSKASIFGEVSIDFADYAEATKISSVS 120

Query: 119 LPIKNSHSDAVLHVSIQRLQDNNDTREEEECEDAKLKPHDRSLRTYLSNGDIDGLSKSDS 178
           LPIKNSHSDAVLHVSIQRLQ+NND REEEECEDAK K +DRSLRTYLS GDIDG +KSDS
Sbjct: 121 LPIKNSHSDAVLHVSIQRLQENNDKREEEECEDAKQKLNDRSLRTYLSTGDIDGCTKSDS 180

Query: 179 SEDVSAKESTNRVELSADRRTXXXXXXXXXXXXXXXFGLDTPRELALQNTSILPNANG 236
           SEDVSA  +TNR  LSAD RT                   TPREL L+NT I P  NG
Sbjct: 181 SEDVSASANTNRAGLSADCRTSSGSDITMSSSDGSSGLD-TPRELGLRNTGIHPATNG 237


>Medtr8g097350.2 | myosin heavy chain-like protein | HC |
           chr8:40796885-40801404 | 20130731
          Length = 981

 Score =  348 bits (893), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 176/241 (73%), Positives = 191/241 (79%), Gaps = 6/241 (2%)

Query: 1   MFRWRNDKNRVKAVFKLHFHVT--QVLQPGVDSLVLSIVPGDIGKVTTRLEKALVRGGVC 58
           MFRWR+DKN+VKAVFKLHFH+T  QVLQ GVDSLVLSIVPGD GK TTRLEKA+V  G C
Sbjct: 1   MFRWRSDKNKVKAVFKLHFHLTLTQVLQSGVDSLVLSIVPGDNGKPTTRLEKAIVHDGNC 60

Query: 59  RWENPVYETVKFIQDPKTGKFSERVYYFVVSTGLSKGSSFGEVSVDFASYADATKLSSVS 118
           +WENPVYE VKF QDPK GKFSE+VYYFV+STGLSK S FGEVS+DFA YA+ATK+SSVS
Sbjct: 61  KWENPVYEAVKFNQDPKNGKFSEKVYYFVISTGLSKASIFGEVSIDFADYAEATKISSVS 120

Query: 119 LPIKNSHSDAVLHVSIQRLQDNNDTREEEECEDAKLKPHDRSLRTYLSNGDIDGLSKSDS 178
           LPIKNSHSDAVLHVSIQRLQ+NND REEEECEDAK K +DRSLRTYLS GDIDG +KSDS
Sbjct: 121 LPIKNSHSDAVLHVSIQRLQENNDKREEEECEDAKQKLNDRSLRTYLSTGDIDGCTKSDS 180

Query: 179 SE---DVSAKESTNRVELSADRRTXXXXXXXXXXXXXXXFGLDTPRELALQNTSILPNAN 235
           SE   DVSA  +TNR  LSAD RT                  DTPREL L+NT I P  N
Sbjct: 181 SEISQDVSASANTNRAGLSADCRTSSGSDITMSSSDGSSGL-DTPRELGLRNTGIHPATN 239

Query: 236 G 236
           G
Sbjct: 240 G 240


>Medtr5g010520.1 | myosin heavy chain-like protein | HC |
           chr5:2833933-2828735 | 20130731
          Length = 1062

 Score =  266 bits (681), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 143/247 (57%), Positives = 171/247 (69%), Gaps = 14/247 (5%)

Query: 1   MFR---WRNDKNRVKAVFKLHFHVTQVLQPGVDSLVLSIVPGDIGKVTTRLEKALVRGGV 57
           MFR   WR++KNR+KAVFKL F+ T+VLQ GVD+LVLSIVPGDIG+ T RLEKA V+ G 
Sbjct: 1   MFRSSKWRSEKNRIKAVFKLQFNATKVLQSGVDALVLSIVPGDIGRPTKRLEKATVQDGN 60

Query: 58  CRWENPVYETVKFIQDPKTGKFSERVYYFVVSTGLSKGSSFGEVSVDFASYADATKLSSV 117
           CRWENPVYETVK+ QDPKT + ++++Y F++STGLSK S+ GEVSV+FA Y DATK S V
Sbjct: 61  CRWENPVYETVKYYQDPKTREINDKIYKFLLSTGLSKASAVGEVSVNFADYVDATKPSHV 120

Query: 118 SLPIKNSHSDAVLHVSIQRLQDNND--TREEEECEDAKLKPHDRSLRTYLSNGDIDGLSK 175
           SLPI+NSH DAVLHVSIQR+Q+ ND   REE+ECED KLK  D S R   SNGD D  +K
Sbjct: 121 SLPIRNSHGDAVLHVSIQRMQEKNDQIQREEDECEDIKLKFDDMSSRNQFSNGDTDESTK 180

Query: 176 SDSSEDVSAKESTNRVELSADRRTXXXXXXXXXXXXXXXFGLDTPRELALQNTSILPNAN 235
           S  SEDVS+K   NR                         G+DTP EL L+ T+I P  N
Sbjct: 181 SYFSEDVSSKAIINRT---------SSGSDVTLSSSDDSSGVDTPCELGLRKTNIQPTTN 231

Query: 236 GFLSDMS 242
            F+  MS
Sbjct: 232 QFVPVMS 238


>Medtr5g010520.2 | myosin heavy chain-like protein | HC |
           chr5:2833915-2828781 | 20130731
          Length = 941

 Score =  266 bits (680), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 143/247 (57%), Positives = 171/247 (69%), Gaps = 14/247 (5%)

Query: 1   MFR---WRNDKNRVKAVFKLHFHVTQVLQPGVDSLVLSIVPGDIGKVTTRLEKALVRGGV 57
           MFR   WR++KNR+KAVFKL F+ T+VLQ GVD+LVLSIVPGDIG+ T RLEKA V+ G 
Sbjct: 1   MFRSSKWRSEKNRIKAVFKLQFNATKVLQSGVDALVLSIVPGDIGRPTKRLEKATVQDGN 60

Query: 58  CRWENPVYETVKFIQDPKTGKFSERVYYFVVSTGLSKGSSFGEVSVDFASYADATKLSSV 117
           CRWENPVYETVK+ QDPKT + ++++Y F++STGLSK S+ GEVSV+FA Y DATK S V
Sbjct: 61  CRWENPVYETVKYYQDPKTREINDKIYKFLLSTGLSKASAVGEVSVNFADYVDATKPSHV 120

Query: 118 SLPIKNSHSDAVLHVSIQRLQDNND--TREEEECEDAKLKPHDRSLRTYLSNGDIDGLSK 175
           SLPI+NSH DAVLHVSIQR+Q+ ND   REE+ECED KLK  D S R   SNGD D  +K
Sbjct: 121 SLPIRNSHGDAVLHVSIQRMQEKNDQIQREEDECEDIKLKFDDMSSRNQFSNGDTDESTK 180

Query: 176 SDSSEDVSAKESTNRVELSADRRTXXXXXXXXXXXXXXXFGLDTPRELALQNTSILPNAN 235
           S  SEDVS+K   NR                         G+DTP EL L+ T+I P  N
Sbjct: 181 SYFSEDVSSKAIINRT---------SSGSDVTLSSSDDSSGVDTPCELGLRKTNIQPTTN 231

Query: 236 GFLSDMS 242
            F+  MS
Sbjct: 232 QFVPVMS 238


>Medtr1g100633.2 | myosin heavy chain-like protein | HC |
           chr1:45558906-45553483 | 20130731
          Length = 789

 Score =  149 bits (377), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 74/171 (43%), Positives = 113/171 (66%), Gaps = 1/171 (0%)

Query: 1   MFRWRNDKNRVKAVFKLHFHVTQVLQPGVDSLVLSIVPGDIGKVTTRLEKALVRGGVCRW 60
           MF+  + KN++KAVFKL F  TQV +   ++L++S+VP D+GK T +LEK  V+ G C W
Sbjct: 1   MFKSWSKKNKIKAVFKLEFQATQVPKMKKNALMVSLVPDDVGKPTVKLEKTAVQDGTCLW 60

Query: 61  ENPVYETVKFIQDPKTGKFSERVYYFVVSTGLSKGSSFGEVSVDFASYADATKLSSVSLP 120
           ENP++E+VK ++D K+G   E++Y+F+V+TG SK    GE S+DFA +   T+  +VSLP
Sbjct: 61  ENPIFESVKLVRDSKSGILHEKIYHFIVATGSSKSGYLGEASIDFADFLTETEPITVSLP 120

Query: 121 IKNSHSDAVLHVSIQRLQDNNDTREEEECEDAKLKPHDRSLRTYLSNGDID 171
           +K ++S  VLHV+IQ ++     R  E+    ++  +D SL+  LS G  D
Sbjct: 121 LKFANSGVVLHVTIQNVEGYTAERNGEDNGAVEI-YNDGSLKHQLSYGSTD 170


>Medtr1g100633.1 | myosin heavy chain-like protein | HC |
           chr1:45558906-45553483 | 20130731
          Length = 853

 Score =  149 bits (377), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 74/171 (43%), Positives = 113/171 (66%), Gaps = 1/171 (0%)

Query: 1   MFRWRNDKNRVKAVFKLHFHVTQVLQPGVDSLVLSIVPGDIGKVTTRLEKALVRGGVCRW 60
           MF+  + KN++KAVFKL F  TQV +   ++L++S+VP D+GK T +LEK  V+ G C W
Sbjct: 1   MFKSWSKKNKIKAVFKLEFQATQVPKMKKNALMVSLVPDDVGKPTVKLEKTAVQDGTCLW 60

Query: 61  ENPVYETVKFIQDPKTGKFSERVYYFVVSTGLSKGSSFGEVSVDFASYADATKLSSVSLP 120
           ENP++E+VK ++D K+G   E++Y+F+V+TG SK    GE S+DFA +   T+  +VSLP
Sbjct: 61  ENPIFESVKLVRDSKSGILHEKIYHFIVATGSSKSGYLGEASIDFADFLTETEPITVSLP 120

Query: 121 IKNSHSDAVLHVSIQRLQDNNDTREEEECEDAKLKPHDRSLRTYLSNGDID 171
           +K ++S  VLHV+IQ ++     R  E+    ++  +D SL+  LS G  D
Sbjct: 121 LKFANSGVVLHVTIQNVEGYTAERNGEDNGAVEI-YNDGSLKHQLSYGSTD 170


>Medtr1g100633.3 | myosin heavy chain-like protein | HC |
           chr1:45558906-45553483 | 20130731
          Length = 795

 Score =  149 bits (377), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 74/171 (43%), Positives = 113/171 (66%), Gaps = 1/171 (0%)

Query: 1   MFRWRNDKNRVKAVFKLHFHVTQVLQPGVDSLVLSIVPGDIGKVTTRLEKALVRGGVCRW 60
           MF+  + KN++KAVFKL F  TQV +   ++L++S+VP D+GK T +LEK  V+ G C W
Sbjct: 1   MFKSWSKKNKIKAVFKLEFQATQVPKMKKNALMVSLVPDDVGKPTVKLEKTAVQDGTCLW 60

Query: 61  ENPVYETVKFIQDPKTGKFSERVYYFVVSTGLSKGSSFGEVSVDFASYADATKLSSVSLP 120
           ENP++E+VK ++D K+G   E++Y+F+V+TG SK    GE S+DFA +   T+  +VSLP
Sbjct: 61  ENPIFESVKLVRDSKSGILHEKIYHFIVATGSSKSGYLGEASIDFADFLTETEPITVSLP 120

Query: 121 IKNSHSDAVLHVSIQRLQDNNDTREEEECEDAKLKPHDRSLRTYLSNGDID 171
           +K ++S  VLHV+IQ ++     R  E+    ++  +D SL+  LS G  D
Sbjct: 121 LKFANSGVVLHVTIQNVEGYTAERNGEDNGAVEI-YNDGSLKHQLSYGSTD 170


>Medtr3g073620.1 | myosin heavy chain-like protein, putative | HC |
           chr3:33197036-33207418 | 20130731
          Length = 1977

 Score =  145 bits (366), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 74/190 (38%), Positives = 111/190 (58%), Gaps = 5/190 (2%)

Query: 3   RWRNDKNRVKAVFKLHFHVTQVLQPGVDSLVLSIVPGDIGKVTTRLEKALVRGGVCRWEN 62
           +W+ +K +VK VF+L FH T + Q G D L +S +P D GKVT++  KA VR G C+W +
Sbjct: 6   KWKIEKTKVKVVFRLQFHATHIPQSGWDKLFISFIPADSGKVTSKTTKANVRNGTCKWSD 65

Query: 63  PVYETVKFIQDPKTGKFSERVYYFVVSTGLSKGSSFGEVSVDFASYADATKLSSVSLPIK 122
           P+YET + +QD KT ++ E+VY  VV  G S+ S  GE ++D A + DA K ++V+LP+ 
Sbjct: 66  PIYETTRLLQDIKTRQYEEKVYKLVVGMGSSRSSILGEANIDLADFVDALKPTAVALPLN 125

Query: 123 NSHSDAVLHVSIQRLQDNNDTREEEECEDAKLKPHDRSLRTYLSNGDIDGLSKS-DSSED 181
            S     LHV++Q L      RE E+  + +    ++ L+T    G  D  + S DSS D
Sbjct: 126 GSDPGVTLHVAVQLLTSKTGFREFEQQRELR----EKGLQTTSDQGSHDESADSKDSSPD 181

Query: 182 VSAKESTNRV 191
            +     N+V
Sbjct: 182 QNVNNHINKV 191


>Medtr1g062200.1 | myosin heavy chain-like protein, putative | HC |
           chr1:27144688-27152668 | 20130731
          Length = 1285

 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 48/196 (24%), Positives = 90/196 (45%), Gaps = 17/196 (8%)

Query: 1   MFRWRNDKNRVKAVFKL-HFHVTQVLQPGVDSLVLSIVPGDIGKVTTRLEKALVRGGVCR 59
           + + R+ K+  +  F++ H    QV   G D L +S+V  + GK   +  K  VR G C+
Sbjct: 4   LHKHRSAKSSDRIEFRISHLKALQV-PKGWDKLFVSVVSVENGKTIAKSSKVTVRNGSCQ 62

Query: 60  WENPVYETVKFIQDPKTGKFSERVYYFVVSTGLSKGSSFGEVSVDFASYADATKLSSVSL 119
           W +   E++ F +D  + +  + +   +V+ G  +    GE +V   SYA +     +S+
Sbjct: 63  WSDVFAESIWFSRDNLSKETDDCILKLIVAMGSLRSGILGEATVSMTSYASSDAAVPLSI 122

Query: 120 PIKNSHSDAVLHVSIQRLQDNNDTREEEECEDAKLKPHDRSLRTYLSNGDIDGLSKSDSS 179
           P+   +   VL+V++Q             C   + KP D+  R   +N  +  +S+++  
Sbjct: 123 PLNKCNHGTVLNVTVQ-------------CLTPRKKPRDQESRE--TNSHLKAMSENNHE 167

Query: 180 EDVSAKESTNRVELSA 195
             V +  S   VE S+
Sbjct: 168 VTVKSNGSDQSVESSS 183


>Medtr1g062200.2 | myosin heavy chain-like protein, putative | HC |
           chr1:27144688-27152668 | 20130731
          Length = 1230

 Score = 62.4 bits (150), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 48/196 (24%), Positives = 90/196 (45%), Gaps = 17/196 (8%)

Query: 1   MFRWRNDKNRVKAVFKL-HFHVTQVLQPGVDSLVLSIVPGDIGKVTTRLEKALVRGGVCR 59
           + + R+ K+  +  F++ H    QV   G D L +S+V  + GK   +  K  VR G C+
Sbjct: 4   LHKHRSAKSSDRIEFRISHLKALQV-PKGWDKLFVSVVSVENGKTIAKSSKVTVRNGSCQ 62

Query: 60  WENPVYETVKFIQDPKTGKFSERVYYFVVSTGLSKGSSFGEVSVDFASYADATKLSSVSL 119
           W +   E++ F +D  + +  + +   +V+ G  +    GE +V   SYA +     +S+
Sbjct: 63  WSDVFAESIWFSRDNLSKETDDCILKLIVAMGSLRSGILGEATVSMTSYASSDAAVPLSI 122

Query: 120 PIKNSHSDAVLHVSIQRLQDNNDTREEEECEDAKLKPHDRSLRTYLSNGDIDGLSKSDSS 179
           P+   +   VL+V++Q             C   + KP D+  R   +N  +  +S+++  
Sbjct: 123 PLNKCNHGTVLNVTVQ-------------CLTPRKKPRDQESRE--TNSHLKAMSENNHE 167

Query: 180 EDVSAKESTNRVELSA 195
             V +  S   VE S+
Sbjct: 168 VTVKSNGSDQSVESSS 183


>Medtr1g090807.1 | myosin heavy chain-like protein, putative | HC |
           chr1:40835835-40829429 | 20130731
          Length = 1255

 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 66/136 (48%), Gaps = 3/136 (2%)

Query: 3   RWRNDKNRVKAVFKLHFHVTQVLQPGVDSLVLSIVPGDIGKVTTRLEKALVRGGVCRWEN 62
           R   DK + +  FK +      ++ G + L +SI+  + G+   +  KALV+ G C WE+
Sbjct: 30  RHSRDKFQERLDFKFYDFKALEIEKGWNQLFVSIICIETGETIAKSGKALVKNGECDWED 89

Query: 63  PVYETVKFIQDPKTGKFSERVYYFVVSTGLSKGSSFGEVSVDFASYADATKLSSVSLP-I 121
            +  T+ +I D         +   +V+ G  +  + GE +++ +SY      ++ SLP I
Sbjct: 90  SMLSTI-WISDYSLQDNQACLLKLLVAMGSPRFGTLGEATINLSSYIGQETFTA-SLPLI 147

Query: 122 KNSHSDAVLHVSIQRL 137
            +    A+L V IQ L
Sbjct: 148 HHCSRGAILQVKIQCL 163